RNA–Protein interactions for RNA: ENST00000268613.14

CDH13-201, Transcript of cadherin 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CDH13, Length 2,722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-201ENST00000268613 LINC00308Q8TCZ7 52 aa5.02□□□□□ -1.61
CDH13-201ENST00000268613 GAFA1Q96PS6 74 aa5.02□□□□□ -1.61
CDH13-201ENST00000268613 A0A087WYN8 130 aa5.02□□□□□ -1.61
CDH13-201ENST00000268613 TRBV6-5A0A0K0K1A5 114 aa5.02□□□□□ -1.61
CDH13-201ENST00000268613 PRAC2D3DTV9 90 aa5.01□□□□□ -1.61
CDH13-201ENST00000268613 MIR7-3HGQ8N6C7 128 aa5.01□□□□□ -1.61
CDH13-201ENST00000268613 PPP1R17O96001 155 aa5□□□□□ -1.61
CDH13-201ENST00000268613 PRB2P02812 416 aaPredicted RBP5□□□□□ -1.61
CDH13-201ENST00000268613 POLR2KP53803 58 aaKnown RBP5□□□□□ -1.61
CDH13-201ENST00000268613 MRGPRG-AS1Q2M3A8 158 aa5□□□□□ -1.61
CDH13-201ENST00000268613 DEFB108BQ8NET1 73 aa5□□□□□ -1.61
CDH13-201ENST00000268613 HECTD1Q9ULT8 2610 aa5□□□□□ -1.61
CDH13-201ENST00000268613 NBPF19A0A087WUL8 3843 aa5□□□□□ -1.61
CDH13-201ENST00000268613 ABCA12Q86UK0 2595 aa5□□□□□ -1.61
CDH13-201ENST00000268613 LYNX1G3V0Z9 82 aa5□□□□□ -1.61
CDH13-201ENST00000268613 LYNX1P0DP58 116 aa5□□□□□ -1.61
CDH13-201ENST00000268613 KRTAP3-3Q9BYR6 98 aa5□□□□□ -1.61
CDH13-201ENST00000268613 KRTAP3-2Q9BYR7 98 aa5□□□□□ -1.61
CDH13-201ENST00000268613 BPY2O14599 106 aa4.99□□□□□ -1.61
CDH13-201ENST00000268613 C20orf166-AS1Q96NR2 134 aa4.99□□□□□ -1.61
CDH13-201ENST00000268613 OCR1Q9BZK8 76 aa4.99□□□□□ -1.61
CDH13-201ENST00000268613 UTP20O75691 2785 aaKnown RBP4.99□□□□□ -1.61
CDH13-201ENST00000268613 I3L2K1 104 aa4.99□□□□□ -1.61
CDH13-201ENST00000268613 PRR4Q16378 134 aa4.99□□□□□ -1.61
CDH13-201ENST00000268613 CIRBP-AS1Q8TBR5 109 aa4.99□□□□□ -1.61
CDH13-201ENST00000268613 CAMK2N2Q96S95 79 aa4.99□□□□□ -1.61
CDH13-201ENST00000268613 PRRC2CQ9Y520 2896 aaKnown RBP4.98□□□□□ -1.61
CDH13-201ENST00000268613 IGHV3-49A0A0A0MS15 119 aa4.98□□□□□ -1.61
CDH13-201ENST00000268613 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
CDH13-201ENST00000268613 SPINK7P58062 85 aa4.98□□□□□ -1.61
CDH13-201ENST00000268613 MINOS1Q5TGZ0 78 aa4.98□□□□□ -1.61
CDH13-201ENST00000268613 MINOS1-NBL1R4GNA1 71 aa4.98□□□□□ -1.61
CDH13-201ENST00000268613 MED13LQ71F56 2210 aa4.98□□□□□ -1.61
CDH13-201ENST00000268613 IGLV4-3A0A075B6K6 122 aa4.97□□□□□ -1.61
CDH13-201ENST00000268613 IGHV3-73A0A0B4J1V6 119 aa4.97□□□□□ -1.61
CDH13-201ENST00000268613 IGHV1-3A0A0C4DH29 117 aa4.97□□□□□ -1.61
CDH13-201ENST00000268613 IGKV2-29A2NJV5 120 aaPredicted RBP4.97□□□□□ -1.61
CDH13-201ENST00000268613 SORL1Q92673 2214 aa4.97□□□□□ -1.61
CDH13-201ENST00000268613 OTOGQ6ZRI0 2925 aa4.97□□□□□ -1.61
CDH13-201ENST00000268613 IGHV4OR15-8A0A075B7B6 117 aa4.97□□□□□ -1.61
CDH13-201ENST00000268613 A0A087WW49 117 aa4.97□□□□□ -1.61
CDH13-201ENST00000268613 K7ERS5 55 aa4.97□□□□□ -1.61
CDH13-201ENST00000268613 ORMDL1Q9P0S3 153 aa4.97□□□□□ -1.61
CDH13-201ENST00000268613 ITPR2Q14571 2701 aa4.97□□□□□ -1.61
CDH13-201ENST00000268613 ODF3BA8MYP8 253 aa4.96□□□□□ -1.61
CDH13-201ENST00000268613 NPBQ8NG41 125 aa4.96□□□□□ -1.61
CDH13-201ENST00000268613 LINC01006Q8NI28 216 aa4.96□□□□□ -1.61
CDH13-201ENST00000268613 SLPIP03973 132 aa4.96□□□□□ -1.62
CDH13-201ENST00000268613 LINC00315P59091 139 aa4.96□□□□□ -1.62
CDH13-201ENST00000268613 CELSR2Q9HCU4 2923 aa4.96□□□□□ -1.62
CDH13-201ENST00000268613 NDUFA1O15239 70 aa4.95□□□□□ -1.62
CDH13-201ENST00000268613 Q6YL49 198 aa4.95□□□□□ -1.62
CDH13-201ENST00000268613 Q6ZTI0 123 aa4.95□□□□□ -1.62
CDH13-201ENST00000268613 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.95□□□□□ -1.62
CDH13-201ENST00000268613 ABCA2Q9BZC7 2435 aa4.95□□□□□ -1.62
CDH13-201ENST00000268613 SUMO4Q6EEV6 95 aa4.95□□□□□ -1.62
CDH13-201ENST00000268613 NAV2Q8IVL1 2488 aa4.95□□□□□ -1.62
CDH13-201ENST00000268613 RELNP78509 3460 aa4.95□□□□□ -1.62
CDH13-201ENST00000268613 K7EIM0 57 aa4.95□□□□□ -1.62
CDH13-201ENST00000268613 PRB3Q04118 309 aaPredicted RBP4.95□□□□□ -1.62
CDH13-201ENST00000268613 PRR9Q5T870 116 aa4.95□□□□□ -1.62
CDH13-201ENST00000268613 C7orf33Q8WU49 177 aa4.95□□□□□ -1.62
CDH13-201ENST00000268613 SMR3AQ99954 134 aa4.95□□□□□ -1.62
CDH13-201ENST00000268613 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.94□□□□□ -1.62
CDH13-201ENST00000268613 LINC00483Q53H64 154 aa4.94□□□□□ -1.62
CDH13-201ENST00000268613 HAMPP81172 84 aa4.94□□□□□ -1.62
CDH13-201ENST00000268613 SPAG11BQ08648 103 aa4.94□□□□□ -1.62
CDH13-201ENST00000268613 CASC10Q5T4H9 136 aa4.94□□□□□ -1.62
CDH13-201ENST00000268613 SPAG11AQ6PDA7 123 aa4.94□□□□□ -1.62
CDH13-201ENST00000268613 LINC00167Q96N53 147 aa4.94□□□□□ -1.62
CDH13-201ENST00000268613 COL12A1Q99715 3063 aa4.94□□□□□ -1.62
CDH13-201ENST00000268613 ITPR3Q14573 2671 aa4.93□□□□□ -1.62
CDH13-201ENST00000268613 TRBV10-1A0A0K0K1A3 114 aa4.93□□□□□ -1.62
CDH13-201ENST00000268613 SETXQ7Z333 2677 aaKnown RBP4.93□□□□□ -1.62
CDH13-201ENST00000268613 IGLV5-37A0A075B6J1 123 aa4.93□□□□□ -1.62
CDH13-201ENST00000268613 MAPK1IP1LQ8NDC0 245 aa4.93□□□□□ -1.62
CDH13-201ENST00000268613 SMIM11BQ8TCY0 68 aa4.93□□□□□ -1.62
CDH13-201ENST00000268613 ANK3Q12955 4377 aaKnown RBP4.92□□□□□ -1.62
CDH13-201ENST00000268613 JMJD7-PLA2G4BH0Y9G9 81 aa4.92□□□□□ -1.62
CDH13-201ENST00000268613 LINC00467Q9BRT7 94 aa4.92□□□□□ -1.62
CDH13-201ENST00000268613 H0YGX0 51 aa4.92□□□□□ -1.62
CDH13-201ENST00000268613 TLX1NBP0CAT3 122 aa4.92□□□□□ -1.62
CDH13-201ENST00000268613 DNAH10OSP0CZ25 163 aa4.92□□□□□ -1.62
CDH13-201ENST00000268613 MYO9AB2RTY4 2548 aa4.92□□□□□ -1.62
CDH13-201ENST00000268613 DCHS2Q6V1P9 2916 aa4.92□□□□□ -1.62
CDH13-201ENST00000268613 A8MUU9 505 aa4.91□□□□□ -1.62
CDH13-201ENST00000268613 ZCCHC13Q8WW36 166 aaKnown RBP4.91□□□□□ -1.62
CDH13-201ENST00000268613 LINC00208Q96KT6 92 aa4.91□□□□□ -1.62
CDH13-201ENST00000268613 ELOF1P60002 83 aaKnown RBP4.91□□□□□ -1.62
CDH13-201ENST00000268613 RNF5Q99942 180 aa4.9□□□□□ -1.62
CDH13-201ENST00000268613 Q9BRP9 147 aa4.9□□□□□ -1.62
CDH13-201ENST00000268613 IGKV2-28A0A075B6P5 120 aa4.9□□□□□ -1.63
CDH13-201ENST00000268613 IGKV2D-28P01615 120 aa4.9□□□□□ -1.63
CDH13-201ENST00000268613 RNASE3P12724 160 aaKnown RBP4.9□□□□□ -1.63
CDH13-201ENST00000268613 MUC7Q8TAX7 377 aa4.9□□□□□ -1.63
CDH13-201ENST00000268613 PLAC8Q9NZF1 115 aa4.9□□□□□ -1.63
CDH13-201ENST00000268613 DPM3Q9P2X0 92 aa4.9□□□□□ -1.63
CDH13-201ENST00000268613 FLNBO75369 2602 aaKnown RBP4.9□□□□□ -1.63
CDH13-201ENST00000268613 CENPEQ02224 2701 aa4.9□□□□□ -1.63
CDH13-201ENST00000268613 IGLV8-61A0A075B6I0 122 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms