RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 WFDC10BQ8IUB3 73 aa13.76□□□□□ -0.21
CSPG5-201ENST00000264723 X6R8D5 127 aa13.76□□□□□ -0.21
CSPG5-201ENST00000264723 M0QXV9 152 aa13.76□□□□□ -0.21
CSPG5-201ENST00000264723 Q6Q795 121 aa13.76□□□□□ -0.21
CSPG5-201ENST00000264723 SYCNQ0VAF6 134 aa13.75□□□□□ -0.21
CSPG5-201ENST00000264723 C3orf22Q8N5N4 141 aa13.75□□□□□ -0.21
CSPG5-201ENST00000264723 UQCRQO14949 82 aa13.74□□□□□ -0.21
CSPG5-201ENST00000264723 COX7BP24311 80 aa13.74□□□□□ -0.21
CSPG5-201ENST00000264723 APCP25054 2843 aa13.74□□□□□ -0.21
CSPG5-201ENST00000264723 C20orf197Q8N268 126 aa13.73□□□□□ -0.21
CSPG5-201ENST00000264723 USP17L23D6RBM5 183 aa13.72□□□□□ -0.21
CSPG5-201ENST00000264723 TRAV10A0A0B4J240 114 aa13.71□□□□□ -0.21
CSPG5-201ENST00000264723 NHLRC4P0CG21 123 aaPredicted RBP13.71□□□□□ -0.21
CSPG5-201ENST00000264723 UPK3BQ9BT76 320 aa13.71□□□□□ -0.21
CSPG5-201ENST00000264723 SMCR5Q8TEV8 140 aa13.7□□□□□ -0.22
CSPG5-201ENST00000264723 Q8N814 137 aa13.69□□□□□ -0.22
CSPG5-201ENST00000264723 FAM19A5Q7Z5A7 132 aaPredicted RBP13.69□□□□□ -0.22
CSPG5-201ENST00000264723 IMUPQ9GZP8 106 aa13.69□□□□□ -0.22
CSPG5-201ENST00000264723 KRTAP10-3P60369 221 aa13.69□□□□□ -0.22
CSPG5-201ENST00000264723 A0A1B0GUV1 79 aa13.69□□□□□ -0.22
CSPG5-201ENST00000264723 KRTAP1-1Q07627 177 aa13.69□□□□□ -0.22
CSPG5-201ENST00000264723 LYPD5Q6UWN5 251 aa13.69□□□□□ -0.22
CSPG5-201ENST00000264723 CR1P17927 2039 aa13.68□□□□□ -0.22
CSPG5-201ENST00000264723 BSNQ9UPA5 3926 aa13.68□□□□□ -0.22
CSPG5-201ENST00000264723 C10orf25Q5T742 122 aa13.68□□□□□ -0.22
CSPG5-201ENST00000264723 HIGD2AQ9BW72 106 aa13.68□□□□□ -0.22
CSPG5-201ENST00000264723 KRTAP24-1Q3LI83 254 aa13.67□□□□□ -0.22
CSPG5-201ENST00000264723 PLAC8L1A1L4L8 177 aa13.67□□□□□ -0.22
CSPG5-201ENST00000264723 RPL37AP8A6NKH3 93 aa13.66□□□□□ -0.22
CSPG5-201ENST00000264723 C9orf129Q5T035 196 aaKnown RBP13.66□□□□□ -0.22
CSPG5-201ENST00000264723 FAM19A1Q7Z5A9 133 aa13.66□□□□□ -0.22
CSPG5-201ENST00000264723 A0A096LNI7 61 aa13.66□□□□□ -0.22
CSPG5-201ENST00000264723 M0R2N4 97 aa13.66□□□□□ -0.22
CSPG5-201ENST00000264723 NSD1Q96L73 2696 aaPredicted RBP13.65□□□□□ -0.22
CSPG5-201ENST00000264723 TRBV10-3A0A0K0K1G6 114 aa13.65□□□□□ -0.22
CSPG5-201ENST00000264723 C19orf73Q9NVV2 129 aa13.64□□□□□ -0.23
CSPG5-201ENST00000264723 COX7CP15954 63 aa13.64□□□□□ -0.23
CSPG5-201ENST00000264723 NIPBLQ6KC79 2804 aaeCLIP13.64□□□□□ -0.23
CSPG5-201ENST00000264723 CSNK1G2-AS1Q8NCQ2 148 aa13.63□□□□□ -0.23
CSPG5-201ENST00000264723 SPATA3Q8NHX4 192 aa13.62□□□□□ -0.23
CSPG5-201ENST00000264723 TRBV7-7A0A0K0K1E9 115 aa13.62□□□□□ -0.23
CSPG5-201ENST00000264723 CCKP06307 115 aa13.61□□□□□ -0.23
CSPG5-201ENST00000264723 NREPQ16612 68 aa13.61□□□□□ -0.23
CSPG5-201ENST00000264723 FUSP35637 526 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSPG5-201ENST00000264723 LOC107984640A0A0U1RRK4 108 aa13.59□□□□□ -0.23
CSPG5-201ENST00000264723 C3orf84H3BNL1 204 aa13.59□□□□□ -0.23
CSPG5-201ENST00000264723 SERP2Q8N6R1 65 aa13.58□□□□□ -0.24
CSPG5-201ENST00000264723 IL17DQ8TAD2 202 aa13.58□□□□□ -0.24
CSPG5-201ENST00000264723 CSMD2Q7Z408 3487 aa13.58□□□□□ -0.24
CSPG5-201ENST00000264723 COX17Q14061 63 aa13.58□□□□□ -0.24
CSPG5-201ENST00000264723 SNURFQ9Y675 71 aa13.58□□□□□ -0.24
CSPG5-201ENST00000264723 J3KT08 172 aa13.57□□□□□ -0.24
CSPG5-201ENST00000264723 ZNF73O43830 326 aaPredicted RBP13.57□□□□□ -0.24
CSPG5-201ENST00000264723 Q8NAQ8 132 aa13.57□□□□□ -0.24
CSPG5-201ENST00000264723 UBE2AP49459 152 aa13.56□□□□□ -0.24
CSPG5-201ENST00000264723 Q6JHZ5 121 aa13.56□□□□□ -0.24
CSPG5-201ENST00000264723 ESRGQ1W209 222 aa13.55□□□□□ -0.24
CSPG5-201ENST00000264723 BAHCC1Q9P281 2608 aa13.54□□□□□ -0.24
CSPG5-201ENST00000264723 Q6ZRU5 148 aa13.53□□□□□ -0.24
CSPG5-201ENST00000264723 HIVEP1P15822 2718 aa13.53□□□□□ -0.24
CSPG5-201ENST00000264723 M0R378 163 aa13.53□□□□□ -0.24
CSPG5-201ENST00000264723 LINC00575Q6W349 94 aa13.51□□□□□ -0.25
CSPG5-201ENST00000264723 EGFEM1PQ0D2K5 195 aa13.5□□□□□ -0.25
CSPG5-201ENST00000264723 CDK2AP2O75956 126 aa13.49□□□□□ -0.25
CSPG5-201ENST00000264723 PPDPFQ9H3Y8 114 aa13.49□□□□□ -0.25
CSPG5-201ENST00000264723 NDUFC2O95298 119 aa13.46□□□□□ -0.25
CSPG5-201ENST00000264723 FAM19A3Q7Z5A8 133 aa13.46□□□□□ -0.25
CSPG5-201ENST00000264723 Q8N9L7 120 aa13.45□□□□□ -0.26
CSPG5-201ENST00000264723 C6orf48Q9UBA6 75 aa13.44□□□□□ -0.26
CSPG5-201ENST00000264723 BPY2O14599 106 aa13.44□□□□□ -0.26
CSPG5-201ENST00000264723 NDUFC2-KCTD14E9PQ53 114 aa13.44□□□□□ -0.26
CSPG5-201ENST00000264723 PDE6GP18545 87 aa13.42□□□□□ -0.26
CSPG5-201ENST00000264723 KIAA0087Q14695 138 aa13.41□□□□□ -0.26
CSPG5-201ENST00000264723 ATP5EP2Q5VTU8 51 aa13.41□□□□□ -0.26
CSPG5-201ENST00000264723 Q6ZVQ6 151 aa13.41□□□□□ -0.26
CSPG5-201ENST00000264723 KRTAP10-11P60412 298 aa13.4□□□□□ -0.26
CSPG5-201ENST00000264723 H3BQ85 93 aa13.39□□□□□ -0.27
CSPG5-201ENST00000264723 C14orf177Q52M58 125 aa13.39□□□□□ -0.27
CSPG5-201ENST00000264723 LINC01547P58512 204 aaPredicted RBP13.36□□□□□ -0.27
CSPG5-201ENST00000264723 MUC7Q8TAX7 377 aa13.36□□□□□ -0.27
CSPG5-201ENST00000264723 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.36□□□□□ -0.27
CSPG5-201ENST00000264723 LINC01561Q8N1V8 128 aa13.36□□□□□ -0.27
CSPG5-201ENST00000264723 FAM236DA0A1B0GTK5 79 aa13.35□□□□□ -0.27
CSPG5-201ENST00000264723 FAM236CP0DP71 79 aa13.35□□□□□ -0.27
CSPG5-201ENST00000264723 VPS13CQ709C8 3753 aa13.35□□□□□ -0.27
CSPG5-201ENST00000264723 TMEM258P61165 79 aa13.34□□□□□ -0.27
CSPG5-201ENST00000264723 NDUFS5O43920 106 aa13.32□□□□□ -0.28
CSPG5-201ENST00000264723 LY6G6CO95867 125 aa13.32□□□□□ -0.28
CSPG5-201ENST00000264723 LINC01556Q5JQF7 62 aa13.32□□□□□ -0.28
CSPG5-201ENST00000264723 LRCOL1A6NCL2 159 aa13.31□□□□□ -0.28
CSPG5-201ENST00000264723 C2orf48Q96LS8 159 aa13.29□□□□□ -0.28
CSPG5-201ENST00000264723 B9D2Q9BPU9 175 aa13.29□□□□□ -0.28
CSPG5-201ENST00000264723 PRR4Q16378 134 aa13.28□□□□□ -0.28
CSPG5-201ENST00000264723 H0Y9J4 135 aa13.28□□□□□ -0.28
CSPG5-201ENST00000264723 Q6ZQT0 140 aa13.28□□□□□ -0.28
CSPG5-201ENST00000264723 MPLKIPQ8TAP9 179 aa13.28□□□□□ -0.28
CSPG5-201ENST00000264723 HRCT1Q6UXD1 115 aa13.27□□□□□ -0.28
CSPG5-201ENST00000264723 ZFHX3Q15911 3703 aa13.27□□□□□ -0.28
CSPG5-201ENST00000264723 Q8NDZ9 215 aa13.27□□□□□ -0.29
CSPG5-201ENST00000264723 DHRS4-AS1Q9P1J3 65 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms