RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 CHTOPQ9Y3Y2 248 aaKnown RBP13.46□□□□□ -0.25
HMG20B-201ENST00000262949 M0R378 163 aa13.45□□□□□ -0.26
HMG20B-201ENST00000262949 CBLN2Q8IUK8 224 aa13.45□□□□□ -0.26
HMG20B-201ENST00000262949 ATP6V1G1O75348 118 aa13.42□□□□□ -0.26
HMG20B-201ENST00000262949 APOC3P02656 99 aa13.41□□□□□ -0.26
HMG20B-201ENST00000262949 CTAG1AP78358 180 aa13.41□□□□□ -0.26
HMG20B-201ENST00000262949 NDUFA5Q16718 116 aa13.41□□□□□ -0.26
HMG20B-201ENST00000262949 PLEKHB2Q96CS7 222 aa13.41□□□□□ -0.26
HMG20B-201ENST00000262949 RETNLBQ9BQ08 111 aa13.41□□□□□ -0.26
HMG20B-201ENST00000262949 SNAPINO95295 136 aa13.4□□□□□ -0.26
HMG20B-201ENST00000262949 HIGD2AQ9BW72 106 aa13.4□□□□□ -0.26
HMG20B-201ENST00000262949 MUC2Q02817 5179 aa13.39□□□□□ -0.27
HMG20B-201ENST00000262949 A0A0U1RRA0 63 aa13.39□□□□□ -0.27
HMG20B-201ENST00000262949 Q8NDZ9 215 aa13.39□□□□□ -0.27
HMG20B-201ENST00000262949 SVBPQ8N300 66 aa13.38□□□□□ -0.27
HMG20B-201ENST00000262949 TRAV12-1A0A0B4J245 112 aa13.37□□□□□ -0.27
HMG20B-201ENST00000262949 TMEM223A0PJW6 202 aa13.37□□□□□ -0.27
HMG20B-201ENST00000262949 CHCHD1Q96BP2 118 aaKnown RBP13.37□□□□□ -0.27
HMG20B-201ENST00000262949 IFI27L1Q96BM0 104 aa13.36□□□□□ -0.27
HMG20B-201ENST00000262949 CDIP1Q9H305 208 aa13.36□□□□□ -0.27
HMG20B-201ENST00000262949 MEIG1Q5JSS6 88 aa13.35□□□□□ -0.27
HMG20B-201ENST00000262949 ZNF706Q9Y5V0 76 aaPredicted RBP13.35□□□□□ -0.27
HMG20B-201ENST00000262949 IGLV7-46A0A075B6I9 117 aa13.34□□□□□ -0.27
HMG20B-201ENST00000262949 LINC00587B1AMM8 73 aa13.33□□□□□ -0.28
HMG20B-201ENST00000262949 SMIM13P0DJ93 91 aa13.33□□□□□ -0.28
HMG20B-201ENST00000262949 SPAG11AQ6PDA7 123 aa13.33□□□□□ -0.28
HMG20B-201ENST00000262949 BOD1L2Q8IYS8 172 aa13.33□□□□□ -0.28
HMG20B-201ENST00000262949 C3orf22Q8N5N4 141 aa13.33□□□□□ -0.28
HMG20B-201ENST00000262949 TPRXLQ17RH7 258 aa13.32□□□□□ -0.28
HMG20B-201ENST00000262949 PRYO14603 147 aa13.31□□□□□ -0.28
HMG20B-201ENST00000262949 HERV-K104P63124 156 aa13.31□□□□□ -0.28
HMG20B-201ENST00000262949 C4orf48Q5BLP8 95 aa13.31□□□□□ -0.28
HMG20B-201ENST00000262949 SPRR4Q96PI1 79 aa13.31□□□□□ -0.28
HMG20B-201ENST00000262949 S100A12P80511 92 aa13.29□□□□□ -0.28
HMG20B-201ENST00000262949 MAP1LC3CQ9BXW4 147 aa13.29□□□□□ -0.28
HMG20B-201ENST00000262949 NCR3O14931 201 aa13.28□□□□□ -0.28
HMG20B-201ENST00000262949 HSBP1O75506 76 aa13.28□□□□□ -0.28
HMG20B-201ENST00000262949 MIR7-3HGQ8N6C7 128 aa13.28□□□□□ -0.28
HMG20B-201ENST00000262949 MYMXA0A1B0GTQ4 84 aa13.26□□□□□ -0.29
HMG20B-201ENST00000262949 ETDCA0A1B0GVM5 59 aa13.26□□□□□ -0.29
HMG20B-201ENST00000262949 LINC00337Q8N6G1 96 aa13.26□□□□□ -0.29
HMG20B-201ENST00000262949 NDUFA12Q9UI09 145 aa13.26□□□□□ -0.29
HMG20B-201ENST00000262949 PPDPFQ9H3Y8 114 aa13.25□□□□□ -0.29
HMG20B-201ENST00000262949 KCNQ1DNQ9H478 68 aa13.25□□□□□ -0.29
HMG20B-201ENST00000262949 H0Y8G0 127 aa13.24□□□□□ -0.29
HMG20B-201ENST00000262949 FAM19A2Q8N3H0 131 aa13.23□□□□□ -0.29
HMG20B-201ENST00000262949 SMCR5Q8TEV8 140 aa13.22□□□□□ -0.29
HMG20B-201ENST00000262949 YPEL4Q96NS1 127 aa13.22□□□□□ -0.29
HMG20B-201ENST00000262949 SPRR1AP35321 89 aa13.21□□□□□ -0.29
HMG20B-201ENST00000262949 TRBV10-3A0A0K0K1G6 114 aa13.2□□□□□ -0.3
HMG20B-201ENST00000262949 FP248Q71RG6 208 aaPredicted RBP13.2□□□□□ -0.3
HMG20B-201ENST00000262949 Q8NBF4 154 aa13.19□□□□□ -0.3
HMG20B-201ENST00000262949 LEPROTL1O95214 131 aa13.17□□□□□ -0.3
HMG20B-201ENST00000262949 DAND5Q8N907 189 aa13.17□□□□□ -0.3
HMG20B-201ENST00000262949 KRTAP4-16G5E9R7 235 aaPredicted RBP13.16□□□□□ -0.3
HMG20B-201ENST00000262949 LEPROTO15243 131 aa13.16□□□□□ -0.3
HMG20B-201ENST00000262949 PLNP26678 52 aa13.16□□□□□ -0.3
HMG20B-201ENST00000262949 SPINK1P00995 79 aa13.15□□□□□ -0.3
HMG20B-201ENST00000262949 MIEN1Q9BRT3 115 aa13.15□□□□□ -0.3
HMG20B-201ENST00000262949 DDTP30046 118 aa13.14□□□□□ -0.31
HMG20B-201ENST00000262949 HERVK_113P61574 105 aa13.14□□□□□ -0.31
HMG20B-201ENST00000262949 GAGE2AQ6NT46 116 aa13.14□□□□□ -0.31
HMG20B-201ENST00000262949 TRBV10-2A0A0K0K1G8 114 aa13.12□□□□□ -0.31
HMG20B-201ENST00000262949 TRGC2P03986 189 aa13.12□□□□□ -0.31
HMG20B-201ENST00000262949 LINC00483Q53H64 154 aa13.12□□□□□ -0.31
HMG20B-201ENST00000262949 HSPB8Q9UJY1 196 aa13.12□□□□□ -0.31
HMG20B-201ENST00000262949 LOC107984156A0A0G2JMH3 177 aa13.11□□□□□ -0.31
HMG20B-201ENST00000262949 B5MCH6 92 aa13.11□□□□□ -0.31
HMG20B-201ENST00000262949 J3QQQ9 107 aa13.11□□□□□ -0.31
HMG20B-201ENST00000262949 NMUP48645 174 aa13.11□□□□□ -0.31
HMG20B-201ENST00000262949 TSPEAR-AS2P59090 65 aa13.11□□□□□ -0.31
HMG20B-201ENST00000262949 ARL17AQ8IVW1 177 aa13.11□□□□□ -0.31
HMG20B-201ENST00000262949 SERF1AO75920 110 aa13.1□□□□□ -0.31
HMG20B-201ENST00000262949 LGALS3P17931 250 aaKnown RBP13.1□□□□□ -0.31
HMG20B-201ENST00000262949 SPANXB1Q9NS25 103 aaPredicted RBP13.1□□□□□ -0.31
HMG20B-201ENST00000262949 DPM2O94777 84 aa13.09□□□□□ -0.31
HMG20B-201ENST00000262949 S100A7L2Q5SY68 101 aa13.09□□□□□ -0.31
HMG20B-201ENST00000262949 IGLV9-49A0A0B4J1Y8 123 aa13.08□□□□□ -0.32
HMG20B-201ENST00000262949 LCE2AQ5TA79 106 aaPredicted RBP13.08□□□□□ -0.32
HMG20B-201ENST00000262949 MOBPQ13875 183 aa13.07□□□□□ -0.32
HMG20B-201ENST00000262949 SSBP3-AS1Q7Z2R9 100 aa13.07□□□□□ -0.32
HMG20B-201ENST00000262949 FAT4Q6V0I7 4981 aa13.07□□□□□ -0.32
HMG20B-201ENST00000262949 MUC17Q685J3 4493 aa13.07□□□□□ -0.32
HMG20B-201ENST00000262949 IGKCP01834 107 aa13.06□□□□□ -0.32
HMG20B-201ENST00000262949 FABP4P15090 132 aa13.06□□□□□ -0.32
HMG20B-201ENST00000262949 ERC2-IT1O76042 136 aa13.05□□□□□ -0.32
HMG20B-201ENST00000262949 JOSD1Q15040 202 aaPredicted RBP13.05□□□□□ -0.32
HMG20B-201ENST00000262949 Q6ZRX8 168 aa13.05□□□□□ -0.32
HMG20B-201ENST00000262949 NDUFC2O95298 119 aa13.04□□□□□ -0.32
HMG20B-201ENST00000262949 KRTAP13-3Q3SY46 172 aa13.04□□□□□ -0.32
HMG20B-201ENST00000262949 PMCHL2Q9BQD1 86 aa13.04□□□□□ -0.32
HMG20B-201ENST00000262949 LINC00310P59036 64 aa13.02□□□□□ -0.33
HMG20B-201ENST00000262949 RPS29P62273 56 aaKnown RBP13.02□□□□□ -0.33
HMG20B-201ENST00000262949 Q9BRP9 147 aa13.02□□□□□ -0.33
HMG20B-201ENST00000262949 KRTAP9-2Q9BYQ4 174 aa13.02□□□□□ -0.33
HMG20B-201ENST00000262949 TRAV23DV6A0A075B6W5 121 aa13.01□□□□□ -0.33
HMG20B-201ENST00000262949 IGLV6-57P01721 117 aa13.01□□□□□ -0.33
HMG20B-201ENST00000262949 CBY1Q9Y3M2 126 aa13□□□□□ -0.33
HMG20B-201ENST00000262949 SLC25A20O43772 301 aa12.98□□□□□ -0.33
HMG20B-201ENST00000262949 HINT1P49773 126 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 901.1 ms