RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 GOLGB1Q14789 3259 aaKnown RBP11.01□□□□□ -0.65
SHANK3-201ENST00000262795 DNAH10OSP0CZ25 163 aa11□□□□□ -0.65
SHANK3-201ENST00000262795 IGIPA6NJ69 53 aa11□□□□□ -0.65
SHANK3-201ENST00000262795 LINC00167Q96N53 147 aa10.99□□□□□ -0.65
SHANK3-201ENST00000262795 PTPRBP23467 1997 aa10.98□□□□□ -0.65
SHANK3-201ENST00000262795 KIAA0087Q14695 138 aa10.98□□□□□ -0.65
SHANK3-201ENST00000262795 Q8N2B8 174 aa10.97□□□□□ -0.65
SHANK3-201ENST00000262795 KRTAP10-11P60412 298 aa10.97□□□□□ -0.65
SHANK3-201ENST00000262795 TMEM254Q8TBM7 123 aa10.96□□□□□ -0.65
SHANK3-201ENST00000262795 A0A096LNJ9 63 aa10.96□□□□□ -0.66
SHANK3-201ENST00000262795 LINC00313P59037 77 aa10.96□□□□□ -0.66
SHANK3-201ENST00000262795 CXCL6P80162 114 aa10.96□□□□□ -0.66
SHANK3-201ENST00000262795 C8orf87E5RJ46 101 aa10.95□□□□□ -0.66
SHANK3-201ENST00000262795 K7EIL1 84 aa10.95□□□□□ -0.66
SHANK3-201ENST00000262795 C1orf64Q8NEQ6 169 aa10.94□□□□□ -0.66
SHANK3-201ENST00000262795 A0A1B0GUV1 79 aa10.93□□□□□ -0.66
SHANK3-201ENST00000262795 LINC00846Q9NV44 126 aa10.93□□□□□ -0.66
SHANK3-201ENST00000262795 ZNF462Q96JM2 2506 aa10.92□□□□□ -0.66
SHANK3-201ENST00000262795 EPM2AB3EWF7 344 aa10.92□□□□□ -0.66
SHANK3-201ENST00000262795 SMIM29Q86T20 159 aa10.92□□□□□ -0.66
SHANK3-201ENST00000262795 KIF25-AS1Q9Y6Z4 181 aa10.91□□□□□ -0.66
SHANK3-201ENST00000262795 PIEZO1Q92508 2521 aa10.91□□□□□ -0.66
SHANK3-201ENST00000262795 FN1P02751 2386 aaKnown RBP10.9□□□□□ -0.66
SHANK3-201ENST00000262795 FAM168BA1KXE4 195 aa10.89□□□□□ -0.67
SHANK3-201ENST00000262795 F8WDY8 70 aa10.89□□□□□ -0.67
SHANK3-201ENST00000262795 COL4A2P08572 1712 aa10.89□□□□□ -0.67
SHANK3-201ENST00000262795 TLN1Q9Y490 2541 aaKnown RBP10.89□□□□□ -0.67
SHANK3-201ENST00000262795 C6orf48Q9UBA6 75 aa10.89□□□□□ -0.67
SHANK3-201ENST00000262795 SMCPP49901 116 aaPredicted RBP10.88□□□□□ -0.67
SHANK3-201ENST00000262795 TM2D3Q9BRN9 247 aa10.87□□□□□ -0.67
SHANK3-201ENST00000262795 WDR87Q6ZQQ6 2873 aa10.87□□□□□ -0.67
SHANK3-201ENST00000262795 MYO9AB2RTY4 2548 aa10.86□□□□□ -0.67
SHANK3-201ENST00000262795 M0R2T5 61 aa10.85□□□□□ -0.67
SHANK3-201ENST00000262795 SPATA3Q8NHX4 192 aa10.85□□□□□ -0.67
SHANK3-201ENST00000262795 ST20-AS1Q8NBB2 130 aa10.84□□□□□ -0.67
SHANK3-201ENST00000262795 CNFNQ9BYD5 112 aa10.83□□□□□ -0.68
SHANK3-201ENST00000262795 Q8NAQ8 132 aa10.82□□□□□ -0.68
SHANK3-201ENST00000262795 C2CD3Q4AC94 2353 aa10.82□□□□□ -0.68
SHANK3-201ENST00000262795 C11orf72Q8NBR9 251 aa10.81□□□□□ -0.68
SHANK3-201ENST00000262795 Q8NBF4 154 aa10.81□□□□□ -0.68
SHANK3-201ENST00000262795 ABCA12Q86UK0 2595 aa10.8□□□□□ -0.68
SHANK3-201ENST00000262795 ACYP2P14621 99 aa10.8□□□□□ -0.68
SHANK3-201ENST00000262795 LINC01554Q52M75 96 aa10.79□□□□□ -0.68
SHANK3-201ENST00000262795 LINC00304Q8N9R0 145 aa10.79□□□□□ -0.68
SHANK3-201ENST00000262795 AMELXQ99217 191 aa10.78□□□□□ -0.68
SHANK3-201ENST00000262795 ANAPC11Q9NYG5 84 aa10.78□□□□□ -0.68
SHANK3-201ENST00000262795 BCE1O60756 84 aa10.76□□□□□ -0.69
SHANK3-201ENST00000262795 LINC01561Q8N1V8 128 aa10.76□□□□□ -0.69
SHANK3-201ENST00000262795 OBSCN-AS1Q96MR7 158 aa10.75□□□□□ -0.69
SHANK3-201ENST00000262795 LINC00476Q8WZB0 136 aa10.74□□□□□ -0.69
SHANK3-201ENST00000262795 CENPFP49454 3210 aa10.74□□□□□ -0.69
SHANK3-201ENST00000262795 FAM218AQ96MZ4 157 aa10.74□□□□□ -0.69
SHANK3-201ENST00000262795 APLNQ9ULZ1 77 aa10.74□□□□□ -0.69
SHANK3-201ENST00000262795 KRTAP10-3P60369 221 aa10.73□□□□□ -0.69
SHANK3-201ENST00000262795 DSCR10P59022 87 aa10.73□□□□□ -0.69
SHANK3-201ENST00000262795 PRO0461Q9UI25 63 aa10.72□□□□□ -0.69
SHANK3-201ENST00000262795 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.69
SHANK3-201ENST00000262795 IGLV5-37A0A075B6J1 123 aa10.71□□□□□ -0.69
SHANK3-201ENST00000262795 IGLV6-57P01721 117 aa10.69□□□□□ -0.7
SHANK3-201ENST00000262795 FAM19A4Q96LR4 140 aa10.69□□□□□ -0.7
SHANK3-201ENST00000262795 H3BNG1 76 aa10.68□□□□□ -0.7
SHANK3-201ENST00000262795 TLN2Q9Y4G6 2542 aa10.68□□□□□ -0.7
SHANK3-201ENST00000262795 A8MUN3 132 aa10.68□□□□□ -0.7
SHANK3-201ENST00000262795 A0A087WTM6 91 aa10.66□□□□□ -0.7
SHANK3-201ENST00000262795 LINC00336Q6ZUF6 198 aa10.65□□□□□ -0.7
SHANK3-201ENST00000262795 RBM12B-AS1Q9P1G2 102 aa10.63□□□□□ -0.71
SHANK3-201ENST00000262795 Q6ZRX8 168 aa10.63□□□□□ -0.71
SHANK3-201ENST00000262795 CRIPTQ9P021 101 aa10.63□□□□□ -0.71
SHANK3-201ENST00000262795 UTRNP46939 3433 aa10.62□□□□□ -0.71
SHANK3-201ENST00000262795 ANKRD17O75179 2603 aaKnown RBP10.61□□□□□ -0.71
SHANK3-201ENST00000262795 IGHV3OR16-9A0A0B4J2B5 98 aa10.61□□□□□ -0.71
SHANK3-201ENST00000262795 F8P00451 2351 aa10.6□□□□□ -0.71
SHANK3-201ENST00000262795 PCSK5Q92824 1860 aa10.6□□□□□ -0.71
SHANK3-201ENST00000262795 LINC01600Q96MT4 127 aa10.6□□□□□ -0.71
SHANK3-201ENST00000262795 WIPF1O43516 503 aa10.59□□□□□ -0.71
SHANK3-201ENST00000262795 CHD8Q9HCK8 2581 aa10.59□□□□□ -0.71
SHANK3-201ENST00000262795 LINC01546A6NGU7 62 aa10.59□□□□□ -0.71
SHANK3-201ENST00000262795 C15orf56Q8N910 161 aa10.59□□□□□ -0.71
SHANK3-201ENST00000262795 A0A0G2JQZ4 141 aa10.57□□□□□ -0.72
SHANK3-201ENST00000262795 A0A1W2PNN7 141 aa10.57□□□□□ -0.72
SHANK3-201ENST00000262795 SPTBN4Q9H254 2564 aa10.57□□□□□ -0.72
SHANK3-201ENST00000262795 GVQW2A0A096LPI5 108 aaPredicted RBP10.57□□□□□ -0.72
SHANK3-201ENST00000262795 CD164Q04900 197 aa10.57□□□□□ -0.72
SHANK3-201ENST00000262795 C10orf142B7Z368 130 aa10.57□□□□□ -0.72
SHANK3-201ENST00000262795 ELOF1P60002 83 aaKnown RBP10.56□□□□□ -0.72
SHANK3-201ENST00000262795 RPS28P62857 69 aaKnown RBP10.56□□□□□ -0.72
SHANK3-201ENST00000262795 K7EQZ3 153 aa10.55□□□□□ -0.72
SHANK3-201ENST00000262795 FASNP49327 2511 aaKnown RBP10.54□□□□□ -0.72
SHANK3-201ENST00000262795 CASC10Q5T4H9 136 aa10.54□□□□□ -0.72
SHANK3-201ENST00000262795 C9orf129Q5T035 196 aaKnown RBP10.54□□□□□ -0.72
SHANK3-201ENST00000262795 POLQO75417 2590 aa10.54□□□□□ -0.72
SHANK3-201ENST00000262795 TP53AIP1Q9HCN2 124 aa10.53□□□□□ -0.72
SHANK3-201ENST00000262795 COX8CQ7Z4L0 72 aa10.53□□□□□ -0.72
SHANK3-201ENST00000262795 COA5Q86WW8 74 aa10.52□□□□□ -0.72
SHANK3-201ENST00000262795 H3BS24 57 aa10.52□□□□□ -0.72
SHANK3-201ENST00000262795 ANKRD11Q6UB99 2663 aaPredicted RBP10.51□□□□□ -0.73
SHANK3-201ENST00000262795 TNP2Q05952 138 aa10.51□□□□□ -0.73
SHANK3-201ENST00000262795 TRAV22A0A0B4J277 110 aa10.51□□□□□ -0.73
SHANK3-201ENST00000262795 A0A0D9SG42 100 aa10.51□□□□□ -0.73
SHANK3-201ENST00000262795 Q6ZQT0 140 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms