RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 WFDC10BQ8IUB3 73 aa9.25□□□□□ -0.93
VMP1-201ENST00000262291 C22orf24Q9Y442 160 aa9.25□□□□□ -0.93
VMP1-201ENST00000262291 ATOX1O00244 68 aa9.25□□□□□ -0.93
VMP1-201ENST00000262291 COX7A2LO14548 114 aa9.25□□□□□ -0.93
VMP1-201ENST00000262291 RPS28P62857 69 aaKnown RBP9.25□□□□□ -0.93
VMP1-201ENST00000262291 K7EIL1 84 aa9.23□□□□□ -0.93
VMP1-201ENST00000262291 C11orf45Q8TAV5 145 aa9.23□□□□□ -0.93
VMP1-201ENST00000262291 MDFIQ99750 246 aa9.23□□□□□ -0.93
VMP1-201ENST00000262291 CXCL5P42830 114 aa9.23□□□□□ -0.93
VMP1-201ENST00000262291 C9orf129Q5T035 196 aaKnown RBP9.23□□□□□ -0.93
VMP1-201ENST00000262291 DEFB131BA0A096LNP1 70 aa9.22□□□□□ -0.93
VMP1-201ENST00000262291 MALP21145 153 aa9.22□□□□□ -0.93
VMP1-201ENST00000262291 HIST1H4AP62805 103 aaKnown RBP9.22□□□□□ -0.93
VMP1-201ENST00000262291 RPL18AQ02543 176 aaKnown RBP9.22□□□□□ -0.93
VMP1-201ENST00000262291 C9orf116Q5BN46 136 aaPredicted RBP9.21□□□□□ -0.93
VMP1-201ENST00000262291 Q5XG85 94 aa9.21□□□□□ -0.93
VMP1-201ENST00000262291 CD164L2Q6UWJ8 174 aa9.21□□□□□ -0.93
VMP1-201ENST00000262291 C6orf223Q8N319 242 aa9.21□□□□□ -0.94
VMP1-201ENST00000262291 C14orf132Q9NPU4 83 aa9.21□□□□□ -0.94
VMP1-201ENST00000262291 ESRGQ1W209 222 aa9.2□□□□□ -0.94
VMP1-201ENST00000262291 ENHOQ6UWT2 76 aa9.2□□□□□ -0.94
VMP1-201ENST00000262291 TMEM258P61165 79 aa9.2□□□□□ -0.94
VMP1-201ENST00000262291 DNAL4O96015 105 aa9.18□□□□□ -0.94
VMP1-201ENST00000262291 UPK3BQ9BT76 320 aa9.18□□□□□ -0.94
VMP1-201ENST00000262291 CCL18P55774 89 aa9.18□□□□□ -0.94
VMP1-201ENST00000262291 SERP2Q8N6R1 65 aa9.18□□□□□ -0.94
VMP1-201ENST00000262291 KIAA0087Q14695 138 aa9.18□□□□□ -0.94
VMP1-201ENST00000262291 SND1-IT1Q9HBX3 110 aa9.18□□□□□ -0.94
VMP1-201ENST00000262291 LINC00846Q9NV44 126 aa9.18□□□□□ -0.94
VMP1-201ENST00000262291 C10orf25Q5T742 122 aa9.17□□□□□ -0.94
VMP1-201ENST00000262291 Q8IZM0 81 aa9.17□□□□□ -0.94
VMP1-201ENST00000262291 LINC01561Q8N1V8 128 aa9.17□□□□□ -0.94
VMP1-201ENST00000262291 USP17L23D6RBM5 183 aa9.16□□□□□ -0.94
VMP1-201ENST00000262291 INAFM2P0DMQ5 153 aa9.16□□□□□ -0.94
VMP1-201ENST00000262291 PRR3P79522 188 aaKnown RBP9.16□□□□□ -0.94
VMP1-201ENST00000262291 IGKV2-28A0A075B6P5 120 aa9.16□□□□□ -0.94
VMP1-201ENST00000262291 IGKV2D-28P01615 120 aa9.16□□□□□ -0.94
VMP1-201ENST00000262291 CRPP02741 224 aa9.16□□□□□ -0.94
VMP1-201ENST00000262291 LINC00337Q8N6G1 96 aa9.16□□□□□ -0.94
VMP1-201ENST00000262291 IBA57-AS1B1ANH7 110 aa9.15□□□□□ -0.94
VMP1-201ENST00000262291 UNQ6190/PRO20217Q6UXQ8 127 aa9.15□□□□□ -0.94
VMP1-201ENST00000262291 HUWE1Q7Z6Z7 4374 aaKnown RBP9.15□□□□□ -0.94
VMP1-201ENST00000262291 PRR34Q9NV39 138 aa9.14□□□□□ -0.95
VMP1-201ENST00000262291 COL7A1Q02388 2944 aa9.14□□□□□ -0.95
VMP1-201ENST00000262291 SPAG11BQ08648 103 aa9.14□□□□□ -0.95
VMP1-201ENST00000262291 HIGD2BQ4VC39 106 aa9.13□□□□□ -0.95
VMP1-201ENST00000262291 A0A087WYN8 130 aa9.13□□□□□ -0.95
VMP1-201ENST00000262291 STAB2Q8WWQ8 2551 aa9.12□□□□□ -0.95
VMP1-201ENST00000262291 NCR3O14931 201 aa9.12□□□□□ -0.95
VMP1-201ENST00000262291 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
VMP1-201ENST00000262291 TM2D3Q9BRN9 247 aa9.12□□□□□ -0.95
VMP1-201ENST00000262291 H3BNG1 76 aa9.11□□□□□ -0.95
VMP1-201ENST00000262291 SLPIP03973 132 aa9.11□□□□□ -0.95
VMP1-201ENST00000262291 TRAV23DV6A0A075B6W5 121 aa9.1□□□□□ -0.95
VMP1-201ENST00000262291 Q8NDZ9 215 aa9.09□□□□□ -0.95
VMP1-201ENST00000262291 Q6JHZ5 121 aa9.09□□□□□ -0.95
VMP1-201ENST00000262291 LINC00336Q6ZUF6 198 aa9.09□□□□□ -0.95
VMP1-201ENST00000262291 C20orf197Q8N268 126 aa9.08□□□□□ -0.96
VMP1-201ENST00000262291 IGKV2D-24A0A075B6R9 120 aa9.08□□□□□ -0.96
VMP1-201ENST00000262291 TRAV10A0A0B4J240 114 aa9.08□□□□□ -0.96
VMP1-201ENST00000262291 SMIM11BQ8TCY0 68 aa9.08□□□□□ -0.96
VMP1-201ENST00000262291 GHRHP01286 108 aa9.07□□□□□ -0.96
VMP1-201ENST00000262291 RPL28P46779 137 aaKnown RBP9.07□□□□□ -0.96
VMP1-201ENST00000262291 C1orf43Q9BWL3 253 aa9.07□□□□□ -0.96
VMP1-201ENST00000262291 TRAV13-2A0A0B4J235 113 aa9.07□□□□□ -0.96
VMP1-201ENST00000262291 PKIGQ9Y2B9 76 aa9.07□□□□□ -0.96
VMP1-201ENST00000262291 LINC00588Q9Y4M8 146 aa9.06□□□□□ -0.96
VMP1-201ENST00000262291 LECT2O14960 151 aa9.06□□□□□ -0.96
VMP1-201ENST00000262291 FAM19A1Q7Z5A9 133 aa9.06□□□□□ -0.96
VMP1-201ENST00000262291 KRTAP26-1Q6PEX3 210 aa9.05□□□□□ -0.96
VMP1-201ENST00000262291 XAGE1AQ9HD64 81 aa9.05□□□□□ -0.96
VMP1-201ENST00000262291 C6orf48Q9UBA6 75 aa9.04□□□□□ -0.96
VMP1-201ENST00000262291 LYSTQ99698 3801 aa9.03□□□□□ -0.96
VMP1-201ENST00000262291 ZNF561-AS1K7EIQ3 104 aa9.03□□□□□ -0.96
VMP1-201ENST00000262291 LINC01556Q5JQF7 62 aa9.03□□□□□ -0.96
VMP1-201ENST00000262291 C15orf56Q8N910 161 aa9.03□□□□□ -0.96
VMP1-201ENST00000262291 CASC10Q5T4H9 136 aa9.02□□□□□ -0.97
VMP1-201ENST00000262291 CAMK2N2Q96S95 79 aa9.02□□□□□ -0.97
VMP1-201ENST00000262291 FAM236DA0A1B0GTK5 79 aa9.02□□□□□ -0.97
VMP1-201ENST00000262291 FAM236CP0DP71 79 aa9.02□□□□□ -0.97
VMP1-201ENST00000262291 TENM2Q9NT68 2774 aa9.01□□□□□ -0.97
VMP1-201ENST00000262291 Q6ZRU5 148 aa9.01□□□□□ -0.97
VMP1-201ENST00000262291 COX17Q14061 63 aa9□□□□□ -0.97
VMP1-201ENST00000262291 PRO0628Q9UI54 55 aa9□□□□□ -0.97
VMP1-201ENST00000262291 DNAH9Q9NYC9 4486 aa9□□□□□ -0.97
VMP1-201ENST00000262291 DNAH10OSP0CZ25 163 aa8.98□□□□□ -0.97
VMP1-201ENST00000262291 NDUFC2O95298 119 aa8.98□□□□□ -0.97
VMP1-201ENST00000262291 OBSCN-AS1Q96MR7 158 aa8.98□□□□□ -0.97
VMP1-201ENST00000262291 SNURFQ9Y675 71 aa8.98□□□□□ -0.97
VMP1-201ENST00000262291 A0A0U1RQV1 116 aa8.96□□□□□ -0.98
VMP1-201ENST00000262291 S100A7L2Q5SY68 101 aa8.96□□□□□ -0.98
VMP1-201ENST00000262291 H7BZZ5 65 aa8.95□□□□□ -0.98
VMP1-201ENST00000262291 CCKP06307 115 aa8.95□□□□□ -0.98
VMP1-201ENST00000262291 LINC00474Q9P2X8 69 aa8.94□□□□□ -0.98
VMP1-201ENST00000262291 FP248Q71RG6 208 aaPredicted RBP8.94□□□□□ -0.98
VMP1-201ENST00000262291 C6orf99Q4VX62 202 aa8.93□□□□□ -0.98
VMP1-201ENST00000262291 RMI2Q96E14 147 aa8.93□□□□□ -0.98
VMP1-201ENST00000262291 ORMDL1Q9P0S3 153 aa8.93□□□□□ -0.98
VMP1-201ENST00000262291 CSMD3Q7Z407 3707 aa8.92□□□□□ -0.98
VMP1-201ENST00000262291 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms