RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 COX6B2Q6YFQ2 88 aa8.6□□□□□ -1.03
ARFGEF1-201ENST00000262215 KIAA1549LQ6ZVL6 1849 aa8.59□□□□□ -1.03
ARFGEF1-201ENST00000262215 EPM2AB3EWF7 344 aa8.59□□□□□ -1.03
ARFGEF1-201ENST00000262215 FAM229AH3BQW9 127 aa8.59□□□□□ -1.03
ARFGEF1-201ENST00000262215 TRAV22A0A0B4J277 110 aa8.58□□□□□ -1.04
ARFGEF1-201ENST00000262215 A0A1W2PPR1 153 aa8.58□□□□□ -1.04
ARFGEF1-201ENST00000262215 A8MUN3 132 aa8.58□□□□□ -1.04
ARFGEF1-201ENST00000262215 F8WDY8 70 aa8.58□□□□□ -1.04
ARFGEF1-201ENST00000262215 IGLV6-57P01721 117 aa8.57□□□□□ -1.04
ARFGEF1-201ENST00000262215 LINC01554Q52M75 96 aa8.56□□□□□ -1.04
ARFGEF1-201ENST00000262215 CEP192Q8TEP8 1941 aa8.56□□□□□ -1.04
ARFGEF1-201ENST00000262215 C16orf90A8MZG2 172 aa8.56□□□□□ -1.04
ARFGEF1-201ENST00000262215 RTL8CO15255 209 aa8.56□□□□□ -1.04
ARFGEF1-201ENST00000262215 RPS28P62857 69 aaKnown RBP8.56□□□□□ -1.04
ARFGEF1-201ENST00000262215 CRIPTQ9P021 101 aa8.56□□□□□ -1.04
ARFGEF1-201ENST00000262215 FN1P02751 2386 aaKnown RBP8.55□□□□□ -1.04
ARFGEF1-201ENST00000262215 LINC00315P59091 139 aa8.55□□□□□ -1.04
ARFGEF1-201ENST00000262215 C9orf129Q5T035 196 aaKnown RBP8.55□□□□□ -1.04
ARFGEF1-201ENST00000262215 J3QL48 77 aa8.54□□□□□ -1.04
ARFGEF1-201ENST00000262215 FAM19A4Q96LR4 140 aa8.54□□□□□ -1.04
ARFGEF1-201ENST00000262215 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
ARFGEF1-201ENST00000262215 Q6ZQT0 140 aa8.54□□□□□ -1.04
ARFGEF1-201ENST00000262215 C16orf95Q9H693 158 aa8.54□□□□□ -1.04
ARFGEF1-201ENST00000262215 C9orf92A6NGG3 77 aa8.54□□□□□ -1.04
ARFGEF1-201ENST00000262215 FAM168BA1KXE4 195 aa8.52□□□□□ -1.04
ARFGEF1-201ENST00000262215 ELOF1P60002 83 aaKnown RBP8.52□□□□□ -1.04
ARFGEF1-201ENST00000262215 C11orf72Q8NBR9 251 aa8.52□□□□□ -1.04
ARFGEF1-201ENST00000262215 COX8CQ7Z4L0 72 aa8.52□□□□□ -1.05
ARFGEF1-201ENST00000262215 TRBV7-4A0A0J9YYF1 115 aa8.52□□□□□ -1.05
ARFGEF1-201ENST00000262215 COA5Q86WW8 74 aa8.52□□□□□ -1.05
ARFGEF1-201ENST00000262215 Q8NBF4 154 aa8.52□□□□□ -1.05
ARFGEF1-201ENST00000262215 LINC01561Q8N1V8 128 aa8.51□□□□□ -1.05
ARFGEF1-201ENST00000262215 KIF25-AS1Q9Y6Z4 181 aa8.51□□□□□ -1.05
ARFGEF1-201ENST00000262215 A0A0D9SG42 100 aa8.51□□□□□ -1.05
ARFGEF1-201ENST00000262215 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
ARFGEF1-201ENST00000262215 ZFYVE26Q68DK2 2539 aa8.51□□□□□ -1.05
ARFGEF1-201ENST00000262215 Q6ZRX8 168 aa8.5□□□□□ -1.05
ARFGEF1-201ENST00000262215 K7EQZ3 153 aa8.5□□□□□ -1.05
ARFGEF1-201ENST00000262215 DSCR10P59022 87 aa8.5□□□□□ -1.05
ARFGEF1-201ENST00000262215 LRP4O75096 1905 aa8.49□□□□□ -1.05
ARFGEF1-201ENST00000262215 NHLRC4P0CG21 123 aaPredicted RBP8.49□□□□□ -1.05
ARFGEF1-201ENST00000262215 Q6ZRP5 223 aa8.48□□□□□ -1.05
ARFGEF1-201ENST00000262215 LRRK2Q5S007 2527 aa8.47□□□□□ -1.05
ARFGEF1-201ENST00000262215 IGF2RP11717 2491 aa8.47□□□□□ -1.05
ARFGEF1-201ENST00000262215 NCOR2Q9Y618 2525 aa8.47□□□□□ -1.05
ARFGEF1-201ENST00000262215 A0A0G2JQZ4 141 aa8.47□□□□□ -1.05
ARFGEF1-201ENST00000262215 A0A1W2PNN7 141 aa8.47□□□□□ -1.05
ARFGEF1-201ENST00000262215 LINC01546A6NGU7 62 aa8.46□□□□□ -1.06
ARFGEF1-201ENST00000262215 UQCR11O14957 56 aa8.46□□□□□ -1.06
ARFGEF1-201ENST00000262215 MIR22HGQ0VDD5 57 aa8.45□□□□□ -1.06
ARFGEF1-201ENST00000262215 ABCA12Q86UK0 2595 aa8.45□□□□□ -1.06
ARFGEF1-201ENST00000262215 OBSCN-AS1Q96MR7 158 aa8.45□□□□□ -1.06
ARFGEF1-201ENST00000262215 PTPRSQ13332 1948 aa8.43□□□□□ -1.06
ARFGEF1-201ENST00000262215 MRPL34Q9BQ48 92 aaKnown RBP8.43□□□□□ -1.06
ARFGEF1-201ENST00000262215 LINC00336Q6ZUF6 198 aa8.43□□□□□ -1.06
ARFGEF1-201ENST00000262215 SETD2Q9BYW2 2564 aaPredicted RBP8.42□□□□□ -1.06
ARFGEF1-201ENST00000262215 H3BPC8 53 aa8.42□□□□□ -1.06
ARFGEF1-201ENST00000262215 ACANP16112 2415 aa8.42□□□□□ -1.06
ARFGEF1-201ENST00000262215 NBDYA0A0U1RRE5 68 aa8.42□□□□□ -1.06
ARFGEF1-201ENST00000262215 LOC101927531A0A1B0GV80 90 aa8.42□□□□□ -1.06
ARFGEF1-201ENST00000262215 LINC00588Q9Y4M8 146 aa8.42□□□□□ -1.06
ARFGEF1-201ENST00000262215 A8MWP4 228 aa8.41□□□□□ -1.06
ARFGEF1-201ENST00000262215 BCE1O60756 84 aa8.41□□□□□ -1.06
ARFGEF1-201ENST00000262215 LOC110117498A0A087WWA1 95 aa8.4□□□□□ -1.06
ARFGEF1-201ENST00000262215 SMR3BP02814 79 aaPredicted RBP8.4□□□□□ -1.07
ARFGEF1-201ENST00000262215 ANAPC11Q9NYG5 84 aa8.4□□□□□ -1.07
ARFGEF1-201ENST00000262215 COL5A1P20908 1838 aaPredicted RBP8.38□□□□□ -1.07
ARFGEF1-201ENST00000262215 DNAH10OSP0CZ25 163 aa8.38□□□□□ -1.07
ARFGEF1-201ENST00000262215 ZNF575Q86XF7 245 aa8.37□□□□□ -1.07
ARFGEF1-201ENST00000262215 IGLV5-37A0A075B6J1 123 aa8.36□□□□□ -1.07
ARFGEF1-201ENST00000262215 WDR87Q6ZQQ6 2873 aa8.35□□□□□ -1.07
ARFGEF1-201ENST00000262215 PKD1L2Q7Z442 2459 aa8.34□□□□□ -1.07
ARFGEF1-201ENST00000262215 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
ARFGEF1-201ENST00000262215 Q8N1X5 172 aa8.33□□□□□ -1.08
ARFGEF1-201ENST00000262215 LITAFQ99732 161 aa8.32□□□□□ -1.08
ARFGEF1-201ENST00000262215 IGLV5-45A0A087WSX0 123 aa8.32□□□□□ -1.08
ARFGEF1-201ENST00000262215 KRTAP24-1Q3LI83 254 aa8.32□□□□□ -1.08
ARFGEF1-201ENST00000262215 IGFL1Q6UW32 110 aa8.32□□□□□ -1.08
ARFGEF1-201ENST00000262215 C8orf17Q9NRJ1 99 aa8.31□□□□□ -1.08
ARFGEF1-201ENST00000262215 CYP4F30PQ9H0H9 118 aa8.3□□□□□ -1.08
ARFGEF1-201ENST00000262215 A0A1B0GW54 56 aa8.3□□□□□ -1.08
ARFGEF1-201ENST00000262215 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
ARFGEF1-201ENST00000262215 EIF4EBP3O60516 100 aaPredicted RBP8.29□□□□□ -1.08
ARFGEF1-201ENST00000262215 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
ARFGEF1-201ENST00000262215 LUZP6Q538Z0 58 aa8.28□□□□□ -1.08
ARFGEF1-201ENST00000262215 CDC42SE1Q9NRR8 79 aa8.28□□□□□ -1.08
ARFGEF1-201ENST00000262215 ADAMTS20P59510 1910 aa8.28□□□□□ -1.08
ARFGEF1-201ENST00000262215 Q8NAQ8 132 aa8.28□□□□□ -1.08
ARFGEF1-201ENST00000262215 COL4A4P53420 1690 aaPredicted RBP8.27□□□□□ -1.09
ARFGEF1-201ENST00000262215 WIPF1O43516 503 aa8.27□□□□□ -1.09
ARFGEF1-201ENST00000262215 CPAMD8Q8IZJ3 1885 aa8.27□□□□□ -1.09
ARFGEF1-201ENST00000262215 PTPRBP23467 1997 aa8.27□□□□□ -1.09
ARFGEF1-201ENST00000262215 USP9XQ93008 2570 aaPredicted RBP8.26□□□□□ -1.09
ARFGEF1-201ENST00000262215 IGLV1-50A0A075B6I6 118 aa8.26□□□□□ -1.09
ARFGEF1-201ENST00000262215 PRR15Q8IV56 129 aa8.26□□□□□ -1.09
ARFGEF1-201ENST00000262215 A0A1B0GVX0 72 aa8.24□□□□□ -1.09
ARFGEF1-201ENST00000262215 H3BNG1 76 aa8.24□□□□□ -1.09
ARFGEF1-201ENST00000262215 CD164Q04900 197 aa8.24□□□□□ -1.09
ARFGEF1-201ENST00000262215 PRO3102Q9H379 93 aa8.24□□□□□ -1.09
ARFGEF1-201ENST00000262215 CSNK1G2-AS1Q8NCQ2 148 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms