RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 Q8N814 137 aa3.29□□□□□ -1.88
USP44-201ENST00000258499 FAM110AQ9BQ89 295 aa3.29□□□□□ -1.88
USP44-201ENST00000258499 UPK3BQ9BT76 320 aa3.29□□□□□ -1.88
USP44-201ENST00000258499 APCP25054 2843 aa3.29□□□□□ -1.88
USP44-201ENST00000258499 LYRM9A8MSI8 78 aa3.28□□□□□ -1.88
USP44-201ENST00000258499 DEFB121Q5J5C9 76 aa3.28□□□□□ -1.88
USP44-201ENST00000258499 KIR2DL5BQ8NHK3 375 aa3.28□□□□□ -1.88
USP44-201ENST00000258499 DIRC1Q969H9 104 aa3.28□□□□□ -1.88
USP44-201ENST00000258499 LOC107984640A0A0U1RRK4 108 aa3.28□□□□□ -1.88
USP44-201ENST00000258499 SMIM9A6NGZ8 99 aa3.28□□□□□ -1.88
USP44-201ENST00000258499 FAM19A1Q7Z5A9 133 aa3.28□□□□□ -1.88
USP44-201ENST00000258499 IL17DQ8TAD2 202 aa3.28□□□□□ -1.88
USP44-201ENST00000258499 KRTAP4-9Q9BYQ8 210 aa3.28□□□□□ -1.88
USP44-201ENST00000258499 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
USP44-201ENST00000258499 A0A1B0GUV1 79 aa3.28□□□□□ -1.89
USP44-201ENST00000258499 J3KT08 172 aa3.28□□□□□ -1.89
USP44-201ENST00000258499 CCKP06307 115 aa3.28□□□□□ -1.89
USP44-201ENST00000258499 C10orf25Q5T742 122 aa3.28□□□□□ -1.89
USP44-201ENST00000258499 Q6JHZ5 121 aa3.28□□□□□ -1.89
USP44-201ENST00000258499 SERP2Q8N6R1 65 aa3.28□□□□□ -1.89
USP44-201ENST00000258499 CSNK1G2-AS1Q8NCQ2 148 aa3.28□□□□□ -1.89
USP44-201ENST00000258499 C1orf43Q9BWL3 253 aa3.28□□□□□ -1.89
USP44-201ENST00000258499 C19orf73Q9NVV2 129 aa3.28□□□□□ -1.89
USP44-201ENST00000258499 NKAPP1Q8N9T2 125 aa3.27□□□□□ -1.89
USP44-201ENST00000258499 TEP1Q99973 2627 aaKnown RBP3.27□□□□□ -1.89
USP44-201ENST00000258499 VPS13CQ709C8 3753 aa3.27□□□□□ -1.89
USP44-201ENST00000258499 PPDPFQ9H3Y8 114 aa3.27□□□□□ -1.89
USP44-201ENST00000258499 CELA1Q9UNI1 258 aa3.27□□□□□ -1.89
USP44-201ENST00000258499 TRBV10-3A0A0K0K1G6 114 aa3.27□□□□□ -1.89
USP44-201ENST00000258499 LY6G6DO95868 133 aa3.27□□□□□ -1.89
USP44-201ENST00000258499 X6R8D5 127 aa3.27□□□□□ -1.89
USP44-201ENST00000258499 CR1P17927 2039 aa3.26□□□□□ -1.89
USP44-201ENST00000258499 ZFHX3Q15911 3703 aa3.26□□□□□ -1.89
USP44-201ENST00000258499 COX7BP24311 80 aa3.26□□□□□ -1.89
USP44-201ENST00000258499 FAM19A3Q7Z5A8 133 aa3.26□□□□□ -1.89
USP44-201ENST00000258499 C16orf95Q9H693 158 aa3.26□□□□□ -1.89
USP44-201ENST00000258499 COX17Q14061 63 aa3.26□□□□□ -1.89
USP44-201ENST00000258499 LELP1Q5T871 98 aa3.26□□□□□ -1.89
USP44-201ENST00000258499 RETNQ9HD89 108 aa3.26□□□□□ -1.89
USP44-201ENST00000258499 MAST4O15021 2626 aa3.25□□□□□ -1.89
USP44-201ENST00000258499 IGHV4-30-4P0DP06 118 aa3.25□□□□□ -1.89
USP44-201ENST00000258499 SNURFQ9Y675 71 aa3.25□□□□□ -1.89
USP44-201ENST00000258499 MIFP14174 115 aa3.25□□□□□ -1.89
USP44-201ENST00000258499 NOTCH1P46531 2555 aa3.25□□□□□ -1.89
USP44-201ENST00000258499 LINC00575Q6W349 94 aa3.25□□□□□ -1.89
USP44-201ENST00000258499 LINC01600Q96MT4 127 aa3.25□□□□□ -1.89
USP44-201ENST00000258499 ZNF73O43830 326 aaPredicted RBP3.24□□□□□ -1.89
USP44-201ENST00000258499 KPRPQ5T749 579 aaPredicted RBP3.24□□□□□ -1.89
USP44-201ENST00000258499 MRAPQ8TCY5 172 aa3.24□□□□□ -1.89
USP44-201ENST00000258499 MGAM2Q2M2H8 2515 aa3.24□□□□□ -1.89
USP44-201ENST00000258499 C3orf84H3BNL1 204 aa3.24□□□□□ -1.89
USP44-201ENST00000258499 NDUFC2O95298 119 aa3.24□□□□□ -1.89
USP44-201ENST00000258499 NREPQ16612 68 aa3.24□□□□□ -1.89
USP44-201ENST00000258499 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
USP44-201ENST00000258499 WFDC10BQ8IUB3 73 aa3.24□□□□□ -1.89
USP44-201ENST00000258499 SPATA3Q8NHX4 192 aa3.24□□□□□ -1.89
USP44-201ENST00000258499 ATP5EP2Q5VTU8 51 aa3.24□□□□□ -1.89
USP44-201ENST00000258499 LINC01561Q8N1V8 128 aa3.23□□□□□ -1.89
USP44-201ENST00000258499 KIAA0087Q14695 138 aa3.23□□□□□ -1.89
USP44-201ENST00000258499 KRTAP19-1Q8IUB9 90 aa3.23□□□□□ -1.89
USP44-201ENST00000258499 DPH3Q96FX2 82 aa3.23□□□□□ -1.89
USP44-201ENST00000258499 C22orf24Q9Y442 160 aa3.23□□□□□ -1.89
USP44-201ENST00000258499 KRTAP10-3P60369 221 aa3.23□□□□□ -1.89
USP44-201ENST00000258499 TMEM258P61165 79 aa3.23□□□□□ -1.89
USP44-201ENST00000258499 Q6ZTC4 211 aa3.23□□□□□ -1.89
USP44-201ENST00000258499 FAM19A5Q7Z5A7 132 aaPredicted RBP3.23□□□□□ -1.89
USP44-201ENST00000258499 Q6ZVQ6 151 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 ETDCA0A1B0GVM5 59 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 RPL37AP8A6NKH3 93 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 PDE6GP18545 87 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 UBE2BP63146 152 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 LYPD5Q6UWN5 251 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 C6orf48Q9UBA6 75 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 DEFB131BA0A096LNP1 70 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 CRYGAP11844 174 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 LINC01547P58512 204 aaPredicted RBP3.22□□□□□ -1.89
USP44-201ENST00000258499 Q8N9L7 120 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 FAM236DA0A1B0GTK5 79 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 PRB2P02812 416 aaPredicted RBP3.22□□□□□ -1.89
USP44-201ENST00000258499 FAM236CP0DP71 79 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 NANOS2P60321 138 aaKnown RBP3.22□□□□□ -1.89
USP44-201ENST00000258499 KRTAP1-1Q07627 177 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 Q6ZRU5 148 aa3.22□□□□□ -1.89
USP44-201ENST00000258499 SYCNQ0VAF6 134 aa3.21□□□□□ -1.9
USP44-201ENST00000258499 MUC7Q8TAX7 377 aa3.21□□□□□ -1.9
USP44-201ENST00000258499 M0R378 163 aa3.21□□□□□ -1.9
USP44-201ENST00000258499 BPY2O14599 106 aa3.21□□□□□ -1.9
USP44-201ENST00000258499 FUSP35637 526 aaKnown RBP eCLIP3.21□□□□□ -1.9
USP44-201ENST00000258499 C11orf45Q8TAV5 145 aa3.21□□□□□ -1.9
USP44-201ENST00000258499 HIVEP1P15822 2718 aa3.21□□□□□ -1.9
USP44-201ENST00000258499 NBEAL1Q6ZS30 2694 aa3.21□□□□□ -1.9
USP44-201ENST00000258499 M0R2N4 97 aa3.21□□□□□ -1.9
USP44-201ENST00000258499 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.21□□□□□ -1.9
USP44-201ENST00000258499 Q8NAQ8 132 aa3.21□□□□□ -1.9
USP44-201ENST00000258499 Q8NDZ9 215 aa3.21□□□□□ -1.9
USP44-201ENST00000258499 STAB1Q9NY15 2570 aa3.2□□□□□ -1.9
USP44-201ENST00000258499 PSCAO43653 123 aa3.2□□□□□ -1.9
USP44-201ENST00000258499 Q6ZQT0 140 aa3.2□□□□□ -1.9
USP44-201ENST00000258499 IGKV2-24A0A0C4DH68 120 aa3.2□□□□□ -1.9
USP44-201ENST00000258499 A0A0J9YWU9 116 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms