RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 DEFB135Q30KP9 77 aa8.62□□□□□ -1.03
USP30-201ENST00000257548 DIRC1Q969H9 104 aa8.62□□□□□ -1.03
USP30-201ENST00000257548 LINC00474Q9P2X8 69 aa8.62□□□□□ -1.03
USP30-201ENST00000257548 TENM4Q6N022 2769 aa8.61□□□□□ -1.03
USP30-201ENST00000257548 LINC01006Q8NI28 216 aa8.6□□□□□ -1.03
USP30-201ENST00000257548 SERP1Q9Y6X1 66 aa8.6□□□□□ -1.03
USP30-201ENST00000257548 NDUFC2-KCTD14E9PQ53 114 aa8.6□□□□□ -1.03
USP30-201ENST00000257548 SMIM26A0A096LP01 95 aa8.6□□□□□ -1.03
USP30-201ENST00000257548 OXTP01178 125 aa8.6□□□□□ -1.03
USP30-201ENST00000257548 MIFP14174 115 aa8.6□□□□□ -1.03
USP30-201ENST00000257548 Q6YL49 198 aa8.6□□□□□ -1.03
USP30-201ENST00000257548 CR1P17927 2039 aa8.59□□□□□ -1.03
USP30-201ENST00000257548 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.03
USP30-201ENST00000257548 TM2D3Q9BRN9 247 aa8.59□□□□□ -1.03
USP30-201ENST00000257548 C22orf24Q9Y442 160 aa8.59□□□□□ -1.03
USP30-201ENST00000257548 J3QLI3 93 aa8.58□□□□□ -1.04
USP30-201ENST00000257548 LINC00482Q8N8I6 264 aa8.58□□□□□ -1.04
USP30-201ENST00000257548 PRO0255Q9UI72 69 aa8.58□□□□□ -1.04
USP30-201ENST00000257548 FLNBO75369 2602 aaKnown RBP8.58□□□□□ -1.04
USP30-201ENST00000257548 UBR5O95071 2799 aaPredicted RBP8.58□□□□□ -1.04
USP30-201ENST00000257548 NANOS2P60321 138 aaKnown RBP8.58□□□□□ -1.04
USP30-201ENST00000257548 LINC01600Q96MT4 127 aa8.58□□□□□ -1.04
USP30-201ENST00000257548 ATRQ13535 2644 aa8.58□□□□□ -1.04
USP30-201ENST00000257548 BPY2O14599 106 aa8.58□□□□□ -1.04
USP30-201ENST00000257548 KRTAP10-9P60411 292 aa8.58□□□□□ -1.04
USP30-201ENST00000257548 TRBV7-6A0A0J9YX20 115 aa8.57□□□□□ -1.04
USP30-201ENST00000257548 M0R2N4 97 aa8.57□□□□□ -1.04
USP30-201ENST00000257548 FUSP35637 526 aaKnown RBP eCLIP8.57□□□□□ -1.04
USP30-201ENST00000257548 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.57□□□□□ -1.04
USP30-201ENST00000257548 TRBV10-3A0A0K0K1G6 114 aa8.57□□□□□ -1.04
USP30-201ENST00000257548 COX7BP24311 80 aa8.57□□□□□ -1.04
USP30-201ENST00000257548 SETXQ7Z333 2677 aaKnown RBP8.57□□□□□ -1.04
USP30-201ENST00000257548 CYSRT1A8MQ03 144 aa8.56□□□□□ -1.04
USP30-201ENST00000257548 Q8IZM0 81 aa8.56□□□□□ -1.04
USP30-201ENST00000257548 PRO0628Q9UI54 55 aa8.55□□□□□ -1.04
USP30-201ENST00000257548 C1orf195Q5TG92 126 aa8.55□□□□□ -1.04
USP30-201ENST00000257548 FAM30AQ9NZY2 134 aa8.55□□□□□ -1.04
USP30-201ENST00000257548 CMC4P56277 68 aaPredicted RBP8.54□□□□□ -1.04
USP30-201ENST00000257548 CD164L2Q6UWJ8 174 aa8.54□□□□□ -1.04
USP30-201ENST00000257548 LINC00575Q6W349 94 aa8.54□□□□□ -1.04
USP30-201ENST00000257548 NKAPP1Q8N9T2 125 aa8.54□□□□□ -1.04
USP30-201ENST00000257548 C10orf25Q5T742 122 aa8.54□□□□□ -1.04
USP30-201ENST00000257548 TMEM254Q8TBM7 123 aa8.54□□□□□ -1.04
USP30-201ENST00000257548 V9GYY9 64 aa8.53□□□□□ -1.04
USP30-201ENST00000257548 MUC7Q8TAX7 377 aa8.52□□□□□ -1.05
USP30-201ENST00000257548 VWFP04275 2813 aa8.52□□□□□ -1.05
USP30-201ENST00000257548 DNAJC9-AS1A6NH13 148 aa8.52□□□□□ -1.05
USP30-201ENST00000257548 H7BZZ5 65 aa8.52□□□□□ -1.05
USP30-201ENST00000257548 PSPHP1O15172 72 aa8.52□□□□□ -1.05
USP30-201ENST00000257548 IGHV4-31P0DP07 118 aa8.52□□□□□ -1.05
USP30-201ENST00000257548 IGKV2D-24A0A075B6R9 120 aa8.51□□□□□ -1.05
USP30-201ENST00000257548 FAM19A3Q7Z5A8 133 aa8.51□□□□□ -1.05
USP30-201ENST00000257548 ZNF73O43830 326 aaPredicted RBP8.51□□□□□ -1.05
USP30-201ENST00000257548 PDE6GP18545 87 aa8.51□□□□□ -1.05
USP30-201ENST00000257548 SPATA3Q8NHX4 192 aa8.5□□□□□ -1.05
USP30-201ENST00000257548 Q6ZQT0 140 aa8.5□□□□□ -1.05
USP30-201ENST00000257548 Q5XG85 94 aa8.5□□□□□ -1.05
USP30-201ENST00000257548 HIGD2AQ9BW72 106 aa8.49□□□□□ -1.05
USP30-201ENST00000257548 TEP1Q99973 2627 aaKnown RBP8.48□□□□□ -1.05
USP30-201ENST00000257548 SPTSSBQ8NFR3 76 aa8.47□□□□□ -1.05
USP30-201ENST00000257548 BAHCC1Q9P281 2608 aa8.46□□□□□ -1.05
USP30-201ENST00000257548 NDUFC1O43677 76 aa8.46□□□□□ -1.05
USP30-201ENST00000257548 UBE2BP63146 152 aa8.46□□□□□ -1.05
USP30-201ENST00000257548 PRYO14603 147 aa8.45□□□□□ -1.06
USP30-201ENST00000257548 DEFB116Q30KQ4 102 aa8.45□□□□□ -1.06
USP30-201ENST00000257548 A0A096LNT2 108 aa8.45□□□□□ -1.06
USP30-201ENST00000257548 RPL37AP8A6NKH3 93 aa8.45□□□□□ -1.06
USP30-201ENST00000257548 OTOGQ6ZRI0 2925 aa8.44□□□□□ -1.06
USP30-201ENST00000257548 COX17Q14061 63 aa8.44□□□□□ -1.06
USP30-201ENST00000257548 DEFB113Q30KQ7 82 aa8.44□□□□□ -1.06
USP30-201ENST00000257548 WFDC13Q8IUB5 93 aa8.43□□□□□ -1.06
USP30-201ENST00000257548 ETDCA0A1B0GVM5 59 aa8.43□□□□□ -1.06
USP30-201ENST00000257548 WFDC10BQ8IUB3 73 aa8.42□□□□□ -1.06
USP30-201ENST00000257548 NOTCH1P46531 2555 aa8.42□□□□□ -1.06
USP30-201ENST00000257548 A0A096LNI7 61 aa8.42□□□□□ -1.06
USP30-201ENST00000257548 TENM1Q9UKZ4 2725 aa8.41□□□□□ -1.06
USP30-201ENST00000257548 A0A0J9YWU9 116 aa8.41□□□□□ -1.06
USP30-201ENST00000257548 OBSCN-AS1Q96MR7 158 aa8.41□□□□□ -1.06
USP30-201ENST00000257548 ESRGQ1W209 222 aa8.41□□□□□ -1.06
USP30-201ENST00000257548 SPART-AS1P0CW21 52 aa8.4□□□□□ -1.06
USP30-201ENST00000257548 LYPD5Q6UWN5 251 aa8.4□□□□□ -1.07
USP30-201ENST00000257548 NBEAL1Q6ZS30 2694 aa8.39□□□□□ -1.07
USP30-201ENST00000257548 A0A1B0GUV1 79 aa8.39□□□□□ -1.07
USP30-201ENST00000257548 LY6G6DO95868 133 aa8.39□□□□□ -1.07
USP30-201ENST00000257548 GIG44P09565 113 aaPredicted RBP8.39□□□□□ -1.07
USP30-201ENST00000257548 CXCL6P80162 114 aa8.39□□□□□ -1.07
USP30-201ENST00000257548 KLKP1Q107X0 134 aa8.39□□□□□ -1.07
USP30-201ENST00000257548 SMIM29Q86T20 159 aa8.39□□□□□ -1.07
USP30-201ENST00000257548 Q8NDZ9 215 aa8.38□□□□□ -1.07
USP30-201ENST00000257548 MGAM2Q2M2H8 2515 aa8.37□□□□□ -1.07
USP30-201ENST00000257548 SEC61GP60059 68 aa8.37□□□□□ -1.07
USP30-201ENST00000257548 PLAC8L1A1L4L8 177 aa8.37□□□□□ -1.07
USP30-201ENST00000257548 IGLV1-51P01701 117 aa8.37□□□□□ -1.07
USP30-201ENST00000257548 FP248Q71RG6 208 aaPredicted RBP8.37□□□□□ -1.07
USP30-201ENST00000257548 HIVEP1P15822 2718 aa8.36□□□□□ -1.07
USP30-201ENST00000257548 COL6A5A8TX70 2615 aa8.36□□□□□ -1.07
USP30-201ENST00000257548 WIPF1O43516 503 aa8.36□□□□□ -1.07
USP30-201ENST00000257548 APOC4P55056 127 aa8.36□□□□□ -1.07
USP30-201ENST00000257548 KIAA0087Q14695 138 aa8.36□□□□□ -1.07
USP30-201ENST00000257548 ATP5EP56381 51 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms