RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 SETD2Q9BYW2 2564 aaPredicted RBP12.4□□□□□ -0.42
EFR3A-201ENST00000254624 A0A087WVE0 104 aa12.4□□□□□ -0.42
EFR3A-201ENST00000254624 ELOF1P60002 83 aaKnown RBP12.4□□□□□ -0.42
EFR3A-201ENST00000254624 CCDC179H3BU77 68 aa12.39□□□□□ -0.43
EFR3A-201ENST00000254624 C19orf73Q9NVV2 129 aa12.39□□□□□ -0.43
EFR3A-201ENST00000254624 CXCL6P80162 114 aa12.38□□□□□ -0.43
EFR3A-201ENST00000254624 PRR4Q16378 134 aa12.38□□□□□ -0.43
EFR3A-201ENST00000254624 A0A1B0GW54 56 aa12.38□□□□□ -0.43
EFR3A-201ENST00000254624 LINC00846Q9NV44 126 aa12.38□□□□□ -0.43
EFR3A-201ENST00000254624 FASNP49327 2511 aaKnown RBP12.37□□□□□ -0.43
EFR3A-201ENST00000254624 HCG22E2RYF7 251 aa12.37□□□□□ -0.43
EFR3A-201ENST00000254624 SOSTDC1Q6X4U4 206 aa12.37□□□□□ -0.43
EFR3A-201ENST00000254624 MTORP42345 2549 aa12.37□□□□□ -0.43
EFR3A-201ENST00000254624 KRTAP10-11P60412 298 aa12.36□□□□□ -0.43
EFR3A-201ENST00000254624 POLQO75417 2590 aa12.35□□□□□ -0.43
EFR3A-201ENST00000254624 Q6ZRX8 168 aa12.34□□□□□ -0.43
EFR3A-201ENST00000254624 K7EIL1 84 aa12.34□□□□□ -0.43
EFR3A-201ENST00000254624 SPATA3Q8NHX4 192 aa12.34□□□□□ -0.43
EFR3A-201ENST00000254624 KRTAP1-3Q8IUG1 177 aa12.33□□□□□ -0.44
EFR3A-201ENST00000254624 Q6ZRP5 223 aa12.33□□□□□ -0.44
EFR3A-201ENST00000254624 DEFB116Q30KQ4 102 aa12.32□□□□□ -0.44
EFR3A-201ENST00000254624 PHF5AQ7RTV0 110 aaKnown RBP12.32□□□□□ -0.44
EFR3A-201ENST00000254624 KRTAP10-3P60369 221 aa12.32□□□□□ -0.44
EFR3A-201ENST00000254624 H0Y9P7 68 aa12.31□□□□□ -0.44
EFR3A-201ENST00000254624 MOBPQ13875 183 aa12.3□□□□□ -0.44
EFR3A-201ENST00000254624 FAM229AH3BQW9 127 aa12.3□□□□□ -0.44
EFR3A-201ENST00000254624 LINC00612Q8N6U2 182 aa12.27□□□□□ -0.45
EFR3A-201ENST00000254624 Q8NBF4 154 aa12.27□□□□□ -0.45
EFR3A-201ENST00000254624 EPM2AB3EWF7 344 aa12.26□□□□□ -0.45
EFR3A-201ENST00000254624 FAM218AQ96MZ4 157 aa12.26□□□□□ -0.45
EFR3A-201ENST00000254624 TRBV7-7A0A0K0K1E9 115 aa12.26□□□□□ -0.45
EFR3A-201ENST00000254624 MUC4Q99102 2169 aa12.26□□□□□ -0.45
EFR3A-201ENST00000254624 ACANP16112 2415 aa12.25□□□□□ -0.45
EFR3A-201ENST00000254624 RETNLBQ9BQ08 111 aa12.25□□□□□ -0.45
EFR3A-201ENST00000254624 BCE1O60756 84 aa12.25□□□□□ -0.45
EFR3A-201ENST00000254624 GIG44P09565 113 aaPredicted RBP12.25□□□□□ -0.45
EFR3A-201ENST00000254624 CRYGAP11844 174 aa12.25□□□□□ -0.45
EFR3A-201ENST00000254624 EPG5Q9HCE0 2579 aa12.25□□□□□ -0.45
EFR3A-201ENST00000254624 SMIM26A0A096LP01 95 aa12.25□□□□□ -0.45
EFR3A-201ENST00000254624 A6NED7 52 aa12.24□□□□□ -0.45
EFR3A-201ENST00000254624 LOC110117498A0A087WWA1 95 aa12.24□□□□□ -0.45
EFR3A-201ENST00000254624 KRTAP1-1Q07627 177 aa12.23□□□□□ -0.45
EFR3A-201ENST00000254624 LITAFQ99732 161 aa12.23□□□□□ -0.45
EFR3A-201ENST00000254624 hDV103S1A0JD37 113 aa12.22□□□□□ -0.45
EFR3A-201ENST00000254624 VPREB1P12018 145 aa12.22□□□□□ -0.45
EFR3A-201ENST00000254624 PCOTHQ58A44 107 aa12.22□□□□□ -0.45
EFR3A-201ENST00000254624 TMEM254Q8TBM7 123 aa12.22□□□□□ -0.45
EFR3A-201ENST00000254624 PRR34Q9NV39 138 aa12.21□□□□□ -0.45
EFR3A-201ENST00000254624 SPACA4Q8TDM5 124 aa12.21□□□□□ -0.45
EFR3A-201ENST00000254624 LINC00476Q8WZB0 136 aa12.21□□□□□ -0.45
EFR3A-201ENST00000254624 TP53AIP1Q9HCN2 124 aa12.21□□□□□ -0.45
EFR3A-201ENST00000254624 IGLV6-57P01721 117 aa12.21□□□□□ -0.46
EFR3A-201ENST00000254624 SVIPQ8NHG7 77 aa12.2□□□□□ -0.46
EFR3A-201ENST00000254624 Q6ZQT0 140 aa12.19□□□□□ -0.46
EFR3A-201ENST00000254624 TM2D3Q9BRN9 247 aa12.19□□□□□ -0.46
EFR3A-201ENST00000254624 SMCPP49901 116 aaPredicted RBP12.19□□□□□ -0.46
EFR3A-201ENST00000254624 CDIP1Q9H305 208 aa12.18□□□□□ -0.46
EFR3A-201ENST00000254624 F8P00451 2351 aa12.17□□□□□ -0.46
EFR3A-201ENST00000254624 CHTF8P0CG12 524 aa12.17□□□□□ -0.46
EFR3A-201ENST00000254624 PRO0461Q9UI25 63 aa12.17□□□□□ -0.46
EFR3A-201ENST00000254624 TYMSOSQ8TAI1 123 aa12.16□□□□□ -0.46
EFR3A-201ENST00000254624 C1orf64Q8NEQ6 169 aa12.16□□□□□ -0.46
EFR3A-201ENST00000254624 SMIM29Q86T20 159 aa12.15□□□□□ -0.47
EFR3A-201ENST00000254624 ST20-AS1Q8NBB2 130 aa12.15□□□□□ -0.47
EFR3A-201ENST00000254624 PLA2G1BP04054 148 aaKnown RBP12.14□□□□□ -0.47
EFR3A-201ENST00000254624 IGLV1-50A0A075B6I6 118 aa12.13□□□□□ -0.47
EFR3A-201ENST00000254624 KCNQ1DNQ9H478 68 aa12.12□□□□□ -0.47
EFR3A-201ENST00000254624 FAM168BA1KXE4 195 aa12.1□□□□□ -0.47
EFR3A-201ENST00000254624 SERTAD4-AS1Q5TG53 156 aa12.1□□□□□ -0.47
EFR3A-201ENST00000254624 C15orf56Q8N910 161 aa12.1□□□□□ -0.47
EFR3A-201ENST00000254624 TRBV7-4A0A0J9YYF1 115 aa12.09□□□□□ -0.47
EFR3A-201ENST00000254624 IGKV2D-30A0A075B6S6 120 aa12.09□□□□□ -0.47
EFR3A-201ENST00000254624 IGKV2-30P06310 120 aa12.09□□□□□ -0.47
EFR3A-201ENST00000254624 RPL37AP61513 92 aaKnown RBP12.09□□□□□ -0.47
EFR3A-201ENST00000254624 TLX1NBP0CAT3 122 aa12.06□□□□□ -0.48
EFR3A-201ENST00000254624 LINC00313P59037 77 aa12.06□□□□□ -0.48
EFR3A-201ENST00000254624 DNAH12Q6ZR08 3092 aa12.06□□□□□ -0.48
EFR3A-201ENST00000254624 SPINK1P00995 79 aa12.06□□□□□ -0.48
EFR3A-201ENST00000254624 H3BPC8 53 aa12.05□□□□□ -0.48
EFR3A-201ENST00000254624 PLA2G2DQ9UNK4 145 aa12.04□□□□□ -0.48
EFR3A-201ENST00000254624 A0A087WTM6 91 aa12.03□□□□□ -0.48
EFR3A-201ENST00000254624 A0A0U1RQV1 116 aa12.03□□□□□ -0.48
EFR3A-201ENST00000254624 LINC00528Q8N1L1 170 aa12.03□□□□□ -0.48
EFR3A-201ENST00000254624 APLNQ9ULZ1 77 aa12.01□□□□□ -0.49
EFR3A-201ENST00000254624 C7orf65Q6ZTY9 151 aa12.01□□□□□ -0.49
EFR3A-201ENST00000254624 C9orf163Q8N9P6 203 aa12□□□□□ -0.49
EFR3A-201ENST00000254624 C8orf87E5RJ46 101 aa12□□□□□ -0.49
EFR3A-201ENST00000254624 C9orf129Q5T035 196 aaKnown RBP11.98□□□□□ -0.49
EFR3A-201ENST00000254624 ACYP2P14621 99 aa11.96□□□□□ -0.49
EFR3A-201ENST00000254624 LINC00336Q6ZUF6 198 aa11.96□□□□□ -0.5
EFR3A-201ENST00000254624 ZNF861PO60384 105 aa11.96□□□□□ -0.5
EFR3A-201ENST00000254624 A8MWP4 228 aa11.95□□□□□ -0.5
EFR3A-201ENST00000254624 HECTD1Q9ULT8 2610 aa11.94□□□□□ -0.5
EFR3A-201ENST00000254624 TRAV22A0A0B4J277 110 aa11.94□□□□□ -0.5
EFR3A-201ENST00000254624 CNBPP62633 177 aaKnown RBP11.93□□□□□ -0.5
EFR3A-201ENST00000254624 SSBP3-AS1Q7Z2R9 100 aa11.93□□□□□ -0.5
EFR3A-201ENST00000254624 ZNF575Q86XF7 245 aa11.92□□□□□ -0.5
EFR3A-201ENST00000254624 SPAG11AQ6PDA7 123 aa11.9□□□□□ -0.5
EFR3A-201ENST00000254624 Q96NJ1 140 aa11.9□□□□□ -0.5
EFR3A-201ENST00000254624 EIF4EBP3O60516 100 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms