RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 DEFB105AQ8NG35 78 aa7.79□□□□□ -1.16
LIN28A-201ENST00000254231 A0A096LNI7 61 aa7.78□□□□□ -1.16
LIN28A-201ENST00000254231 H7C423 109 aa7.78□□□□□ -1.16
LIN28A-201ENST00000254231 NDUFA1O15239 70 aa7.78□□□□□ -1.16
LIN28A-201ENST00000254231 CARD19Q96LW7 228 aa7.78□□□□□ -1.16
LIN28A-201ENST00000254231 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.77□□□□□ -1.17
LIN28A-201ENST00000254231 MUC7Q8TAX7 377 aa7.76□□□□□ -1.17
LIN28A-201ENST00000254231 FAM168BA1KXE4 195 aa7.76□□□□□ -1.17
LIN28A-201ENST00000254231 DNAH10Q8IVF4 4471 aa7.76□□□□□ -1.17
LIN28A-201ENST00000254231 LRCOL1A6NCL2 159 aa7.75□□□□□ -1.17
LIN28A-201ENST00000254231 TRIAP1O43715 76 aa7.75□□□□□ -1.17
LIN28A-201ENST00000254231 SYCNQ0VAF6 134 aa7.75□□□□□ -1.17
LIN28A-201ENST00000254231 IGLV5-39A0A0G2JS06 123 aa7.75□□□□□ -1.17
LIN28A-201ENST00000254231 LINC01556Q5JQF7 62 aa7.75□□□□□ -1.17
LIN28A-201ENST00000254231 PRO0461Q9UI25 63 aa7.75□□□□□ -1.17
LIN28A-201ENST00000254231 DNAH7Q8WXX0 4024 aa7.74□□□□□ -1.17
LIN28A-201ENST00000254231 C6orf48Q9UBA6 75 aa7.74□□□□□ -1.17
LIN28A-201ENST00000254231 NUPR2A6NF83 97 aa7.74□□□□□ -1.17
LIN28A-201ENST00000254231 APLNQ9ULZ1 77 aa7.74□□□□□ -1.17
LIN28A-201ENST00000254231 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
LIN28A-201ENST00000254231 NHLRC4P0CG21 123 aaPredicted RBP7.73□□□□□ -1.17
LIN28A-201ENST00000254231 CDIP1Q9H305 208 aa7.73□□□□□ -1.17
LIN28A-201ENST00000254231 LITAFQ99732 161 aa7.72□□□□□ -1.17
LIN28A-201ENST00000254231 DNAH9Q9NYC9 4486 aa7.72□□□□□ -1.17
LIN28A-201ENST00000254231 IGLV5-45A0A087WSX0 123 aa7.72□□□□□ -1.17
LIN28A-201ENST00000254231 LINC00337Q8N6G1 96 aa7.72□□□□□ -1.17
LIN28A-201ENST00000254231 GAGE2AQ6NT46 116 aa7.71□□□□□ -1.17
LIN28A-201ENST00000254231 Q8IZM0 81 aa7.71□□□□□ -1.17
LIN28A-201ENST00000254231 HERV-K104P63124 156 aa7.71□□□□□ -1.18
LIN28A-201ENST00000254231 UBE2BP63146 152 aa7.71□□□□□ -1.18
LIN28A-201ENST00000254231 DNAL4O96015 105 aa7.71□□□□□ -1.18
LIN28A-201ENST00000254231 KIAA0087Q14695 138 aa7.71□□□□□ -1.18
LIN28A-201ENST00000254231 C15orf56Q8N910 161 aa7.71□□□□□ -1.18
LIN28A-201ENST00000254231 NKAPP1Q8N9T2 125 aa7.71□□□□□ -1.18
LIN28A-201ENST00000254231 PLECQ15149 4684 aaKnown RBP7.7□□□□□ -1.18
LIN28A-201ENST00000254231 PRR34Q9NV39 138 aa7.7□□□□□ -1.18
LIN28A-201ENST00000254231 KMT2AQ03164 3969 aa7.69□□□□□ -1.18
LIN28A-201ENST00000254231 STARD9Q9P2P6 4700 aa7.69□□□□□ -1.18
LIN28A-201ENST00000254231 NBDYA0A0U1RRE5 68 aa7.68□□□□□ -1.18
LIN28A-201ENST00000254231 Q6ZRP5 223 aa7.68□□□□□ -1.18
LIN28A-201ENST00000254231 PPDPFQ9H3Y8 114 aa7.68□□□□□ -1.18
LIN28A-201ENST00000254231 IBA57-AS1B1ANH7 110 aa7.68□□□□□ -1.18
LIN28A-201ENST00000254231 IFITM1P13164 125 aa7.68□□□□□ -1.18
LIN28A-201ENST00000254231 C6orf99Q4VX62 202 aa7.68□□□□□ -1.18
LIN28A-201ENST00000254231 Q8NDZ9 215 aa7.68□□□□□ -1.18
LIN28A-201ENST00000254231 H3BNG1 76 aa7.68□□□□□ -1.18
LIN28A-201ENST00000254231 SMIM20Q8N5G0 67 aa7.68□□□□□ -1.18
LIN28A-201ENST00000254231 RMI2Q96E14 147 aa7.68□□□□□ -1.18
LIN28A-201ENST00000254231 SCGB1A1P11684 91 aa7.67□□□□□ -1.18
LIN28A-201ENST00000254231 SMIM11BQ8TCY0 68 aa7.67□□□□□ -1.18
LIN28A-201ENST00000254231 CCDC179H3BU77 68 aa7.66□□□□□ -1.18
LIN28A-201ENST00000254231 HIGD2AQ9BW72 106 aa7.66□□□□□ -1.18
LIN28A-201ENST00000254231 SPANXCQ9NY87 97 aa7.66□□□□□ -1.18
LIN28A-201ENST00000254231 TRBV10-2A0A0K0K1G8 114 aa7.66□□□□□ -1.18
LIN28A-201ENST00000254231 TRBV10-3A0A0K0K1G6 114 aa7.65□□□□□ -1.18
LIN28A-201ENST00000254231 WWC2-AS2Q96NR7 200 aa7.65□□□□□ -1.18
LIN28A-201ENST00000254231 BAALC-AS2P0C853 105 aa7.65□□□□□ -1.19
LIN28A-201ENST00000254231 FAM236AA0A1B0GUQ0 79 aa7.64□□□□□ -1.19
LIN28A-201ENST00000254231 FAM236BA0A1B0GV22 79 aa7.64□□□□□ -1.19
LIN28A-201ENST00000254231 NDUFV3P56181 108 aaKnown RBP7.64□□□□□ -1.19
LIN28A-201ENST00000254231 A0A0B4J2C4 111 aa7.63□□□□□ -1.19
LIN28A-201ENST00000254231 IGKV3D-7A0A0C4DH55 119 aa7.63□□□□□ -1.19
LIN28A-201ENST00000254231 SPANXDQ9BXN6 97 aa7.62□□□□□ -1.19
LIN28A-201ENST00000254231 TNP2Q05952 138 aa7.62□□□□□ -1.19
LIN28A-201ENST00000254231 SERTAD4-AS1Q5TG53 156 aa7.62□□□□□ -1.19
LIN28A-201ENST00000254231 HIST1H4AP62805 103 aaKnown RBP7.62□□□□□ -1.19
LIN28A-201ENST00000254231 SMR3BP02814 79 aaPredicted RBP7.61□□□□□ -1.19
LIN28A-201ENST00000254231 C1orf134Q5TEV5 83 aa7.61□□□□□ -1.19
LIN28A-201ENST00000254231 TRAV13-2A0A0B4J235 113 aa7.61□□□□□ -1.19
LIN28A-201ENST00000254231 A0A087WYN8 130 aa7.61□□□□□ -1.19
LIN28A-201ENST00000254231 CXCL5P42830 114 aa7.61□□□□□ -1.19
LIN28A-201ENST00000254231 COPS9Q8WXC6 57 aa7.61□□□□□ -1.19
LIN28A-201ENST00000254231 FAM218AQ96MZ4 157 aa7.61□□□□□ -1.19
LIN28A-201ENST00000254231 PRLHP81277 87 aa7.6□□□□□ -1.19
LIN28A-201ENST00000254231 A0A0G2JQZ4 141 aa7.6□□□□□ -1.19
LIN28A-201ENST00000254231 A0A1W2PNN7 141 aa7.6□□□□□ -1.19
LIN28A-201ENST00000254231 NDUFC2-KCTD14E9PQ53 114 aa7.6□□□□□ -1.19
LIN28A-201ENST00000254231 C3orf22Q8N5N4 141 aa7.6□□□□□ -1.19
LIN28A-201ENST00000254231 LAMTOR3Q9UHA4 124 aa7.59□□□□□ -1.19
LIN28A-201ENST00000254231 PHF5AQ7RTV0 110 aaKnown RBP7.59□□□□□ -1.19
LIN28A-201ENST00000254231 TRBV30A0A0K0K1B3 111 aa7.58□□□□□ -1.2
LIN28A-201ENST00000254231 C9orf153Q5TBE3 101 aa7.58□□□□□ -1.2
LIN28A-201ENST00000254231 C14orf132Q9NPU4 83 aa7.58□□□□□ -1.2
LIN28A-201ENST00000254231 KRTAP26-1Q6PEX3 210 aa7.58□□□□□ -1.2
LIN28A-201ENST00000254231 TMEM126AQ9H061 195 aa7.57□□□□□ -1.2
LIN28A-201ENST00000254231 C9orf129Q5T035 196 aaKnown RBP7.57□□□□□ -1.2
LIN28A-201ENST00000254231 IGLV5-52A0A0A0MRZ9 124 aa7.57□□□□□ -1.2
LIN28A-201ENST00000254231 LST1O00453 97 aa7.56□□□□□ -1.2
LIN28A-201ENST00000254231 SDIM1Q6ZPB5 146 aa7.56□□□□□ -1.2
LIN28A-201ENST00000254231 PANO1I0J062 215 aa7.55□□□□□ -1.2
LIN28A-201ENST00000254231 H3BT86 120 aa7.55□□□□□ -1.2
LIN28A-201ENST00000254231 ANAPC11Q9NYG5 84 aa7.55□□□□□ -1.2
LIN28A-201ENST00000254231 M0QXV9 152 aa7.55□□□□□ -1.2
LIN28A-201ENST00000254231 TIMM17BO60830 172 aa7.55□□□□□ -1.2
LIN28A-201ENST00000254231 FAM19A1Q7Z5A9 133 aa7.55□□□□□ -1.2
LIN28A-201ENST00000254231 Q6ZQY7 126 aa7.54□□□□□ -1.2
LIN28A-201ENST00000254231 FAM19A3Q7Z5A8 133 aa7.54□□□□□ -1.2
LIN28A-201ENST00000254231 C22orf24Q9Y442 160 aa7.54□□□□□ -1.2
LIN28A-201ENST00000254231 ETDCA0A1B0GVM5 59 aa7.54□□□□□ -1.2
LIN28A-201ENST00000254231 HRCT1Q6UXD1 115 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms