RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ATP11AUNQ6ZP68 121 aa9.35□□□□□ -0.91
PCDHGA3-201ENST00000253812 LINC01561Q8N1V8 128 aa9.35□□□□□ -0.91
PCDHGA3-201ENST00000253812 TM2D3Q9BRN9 247 aa9.34□□□□□ -0.91
PCDHGA3-201ENST00000253812 A8MTW9 85 aa9.33□□□□□ -0.92
PCDHGA3-201ENST00000253812 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
PCDHGA3-201ENST00000253812 EYSQ5T1H1 3165 aa9.33□□□□□ -0.92
PCDHGA3-201ENST00000253812 IGLV1-40P01703 118 aa9.33□□□□□ -0.92
PCDHGA3-201ENST00000253812 C7orf33Q8WU49 177 aa9.33□□□□□ -0.92
PCDHGA3-201ENST00000253812 REV3LO60673 3130 aa9.32□□□□□ -0.92
PCDHGA3-201ENST00000253812 ACANP16112 2415 aa9.32□□□□□ -0.92
PCDHGA3-201ENST00000253812 TRAV10A0A0B4J240 114 aa9.32□□□□□ -0.92
PCDHGA3-201ENST00000253812 LINC01006Q8NI28 216 aa9.32□□□□□ -0.92
PCDHGA3-201ENST00000253812 TP53AIP1Q9HCN2 124 aa9.32□□□□□ -0.92
PCDHGA3-201ENST00000253812 KRTAP10-9P60411 292 aa9.32□□□□□ -0.92
PCDHGA3-201ENST00000253812 RETNLBQ9BQ08 111 aa9.32□□□□□ -0.92
PCDHGA3-201ENST00000253812 Q9BRP9 147 aa9.32□□□□□ -0.92
PCDHGA3-201ENST00000253812 MAST4O15021 2626 aa9.32□□□□□ -0.92
PCDHGA3-201ENST00000253812 AVPP01185 164 aa9.32□□□□□ -0.92
PCDHGA3-201ENST00000253812 A8MUN3 132 aa9.31□□□□□ -0.92
PCDHGA3-201ENST00000253812 ACYP2P14621 99 aa9.31□□□□□ -0.92
PCDHGA3-201ENST00000253812 FAM218AQ96MZ4 157 aa9.31□□□□□ -0.92
PCDHGA3-201ENST00000253812 LINC00474Q9P2X8 69 aa9.31□□□□□ -0.92
PCDHGA3-201ENST00000253812 VCANP13611 3396 aa9.31□□□□□ -0.92
PCDHGA3-201ENST00000253812 ERC2-IT1O76042 136 aa9.31□□□□□ -0.92
PCDHGA3-201ENST00000253812 Q6ZTC4 211 aa9.31□□□□□ -0.92
PCDHGA3-201ENST00000253812 ATG2AQ2TAZ0 1938 aa9.31□□□□□ -0.92
PCDHGA3-201ENST00000253812 SPEGQ15772 3267 aa9.3□□□□□ -0.92
PCDHGA3-201ENST00000253812 A0A1B0GUV1 79 aa9.3□□□□□ -0.92
PCDHGA3-201ENST00000253812 KIF25-AS1Q9Y6Z4 181 aa9.3□□□□□ -0.92
PCDHGA3-201ENST00000253812 LOC110117498A0A087WWA1 95 aa9.29□□□□□ -0.92
PCDHGA3-201ENST00000253812 Q6ZQT0 140 aa9.29□□□□□ -0.92
PCDHGA3-201ENST00000253812 LINC00482Q8N8I6 264 aa9.29□□□□□ -0.92
PCDHGA3-201ENST00000253812 WIPF1O43516 503 aa9.29□□□□□ -0.92
PCDHGA3-201ENST00000253812 LAMA1P25391 3075 aa9.28□□□□□ -0.92
PCDHGA3-201ENST00000253812 EXPH5Q8NEV8 1989 aa9.27□□□□□ -0.92
PCDHGA3-201ENST00000253812 ZNF702PQ9H963 129 aa9.27□□□□□ -0.92
PCDHGA3-201ENST00000253812 KLKP1Q107X0 134 aa9.27□□□□□ -0.93
PCDHGA3-201ENST00000253812 CPAMD8Q8IZJ3 1885 aa9.27□□□□□ -0.93
PCDHGA3-201ENST00000253812 KTN1-AS1Q86SY8 53 aa9.27□□□□□ -0.93
PCDHGA3-201ENST00000253812 C6orf223Q8N319 242 aa9.26□□□□□ -0.93
PCDHGA3-201ENST00000253812 HECTD1Q9ULT8 2610 aa9.26□□□□□ -0.93
PCDHGA3-201ENST00000253812 X6R8D5 127 aa9.26□□□□□ -0.93
PCDHGA3-201ENST00000253812 C2orf48Q96LS8 159 aa9.25□□□□□ -0.93
PCDHGA3-201ENST00000253812 FHL3Q13643 280 aa9.25□□□□□ -0.93
PCDHGA3-201ENST00000253812 SMCR5Q8TEV8 140 aa9.25□□□□□ -0.93
PCDHGA3-201ENST00000253812 EDN2P20800 178 aa9.25□□□□□ -0.93
PCDHGA3-201ENST00000253812 ODF3L2Q3SX64 289 aa9.25□□□□□ -0.93
PCDHGA3-201ENST00000253812 SPINT4Q6UDR6 99 aa9.25□□□□□ -0.93
PCDHGA3-201ENST00000253812 MDFIQ99750 246 aa9.25□□□□□ -0.93
PCDHGA3-201ENST00000253812 C18orf65Q6ZTR6 163 aa9.24□□□□□ -0.93
PCDHGA3-201ENST00000253812 COL4A2P08572 1712 aa9.24□□□□□ -0.93
PCDHGA3-201ENST00000253812 C11orf72Q8NBR9 251 aa9.24□□□□□ -0.93
PCDHGA3-201ENST00000253812 ATRQ13535 2644 aa9.24□□□□□ -0.93
PCDHGA3-201ENST00000253812 Q6ZSN1 163 aa9.24□□□□□ -0.93
PCDHGA3-201ENST00000253812 LCA10Q71F78 164 aa9.24□□□□□ -0.93
PCDHGA3-201ENST00000253812 IGLV5-45A0A087WSX0 123 aa9.24□□□□□ -0.93
PCDHGA3-201ENST00000253812 IGHV3OR16-9A0A0B4J2B5 98 aa9.24□□□□□ -0.93
PCDHGA3-201ENST00000253812 KIAA0087Q14695 138 aa9.24□□□□□ -0.93
PCDHGA3-201ENST00000253812 TRAV22A0A0B4J277 110 aa9.23□□□□□ -0.93
PCDHGA3-201ENST00000253812 C7orf65Q6ZTY9 151 aa9.23□□□□□ -0.93
PCDHGA3-201ENST00000253812 C6orf48Q9UBA6 75 aa9.22□□□□□ -0.93
PCDHGA3-201ENST00000253812 SPTBN5Q9NRC6 3674 aaKnown RBP9.22□□□□□ -0.93
PCDHGA3-201ENST00000253812 FSHBP01225 129 aa9.22□□□□□ -0.93
PCDHGA3-201ENST00000253812 USP34Q70CQ2 3546 aa9.21□□□□□ -0.93
PCDHGA3-201ENST00000253812 MYO15AQ9UKN7 3530 aa9.21□□□□□ -0.94
PCDHGA3-201ENST00000253812 MGAM2Q2M2H8 2515 aa9.21□□□□□ -0.94
PCDHGA3-201ENST00000253812 LINC00315P59091 139 aa9.2□□□□□ -0.94
PCDHGA3-201ENST00000253812 SMR3AQ99954 134 aa9.2□□□□□ -0.94
PCDHGA3-201ENST00000253812 LOC101927531A0A1B0GV80 90 aa9.2□□□□□ -0.94
PCDHGA3-201ENST00000253812 CIRBP-AS1Q8TBR5 109 aa9.2□□□□□ -0.94
PCDHGA3-201ENST00000253812 Q8NBF4 154 aa9.2□□□□□ -0.94
PCDHGA3-201ENST00000253812 BRI3O95415 125 aa9.19□□□□□ -0.94
PCDHGA3-201ENST00000253812 RAI1Q7Z5J4 1906 aaPredicted RBP9.19□□□□□ -0.94
PCDHGA3-201ENST00000253812 H7BZZ5 65 aa9.18□□□□□ -0.94
PCDHGA3-201ENST00000253812 SETXQ7Z333 2677 aaKnown RBP9.17□□□□□ -0.94
PCDHGA3-201ENST00000253812 ANKRD17O75179 2603 aaKnown RBP9.17□□□□□ -0.94
PCDHGA3-201ENST00000253812 USP24Q9UPU5 2620 aa9.16□□□□□ -0.94
PCDHGA3-201ENST00000253812 ELOF1P60002 83 aaKnown RBP9.16□□□□□ -0.94
PCDHGA3-201ENST00000253812 IGKV2D-30A0A075B6S6 120 aa9.15□□□□□ -0.94
PCDHGA3-201ENST00000253812 IGKV2-30P06310 120 aa9.15□□□□□ -0.94
PCDHGA3-201ENST00000253812 UQCR11O14957 56 aa9.15□□□□□ -0.95
PCDHGA3-201ENST00000253812 Q6ZRU5 148 aa9.15□□□□□ -0.95
PCDHGA3-201ENST00000253812 PRLHP81277 87 aa9.14□□□□□ -0.95
PCDHGA3-201ENST00000253812 COA5Q86WW8 74 aa9.14□□□□□ -0.95
PCDHGA3-201ENST00000253812 ADAMTS20P59510 1910 aa9.14□□□□□ -0.95
PCDHGA3-201ENST00000253812 VPS13AQ96RL7 3174 aa9.13□□□□□ -0.95
PCDHGA3-201ENST00000253812 LITAFQ99732 161 aa9.12□□□□□ -0.95
PCDHGA3-201ENST00000253812 LINC01600Q96MT4 127 aa9.11□□□□□ -0.95
PCDHGA3-201ENST00000253812 TRBV7-4A0A0J9YYF1 115 aa9.1□□□□□ -0.95
PCDHGA3-201ENST00000253812 SSBP3-AS1Q7Z2R9 100 aa9.1□□□□□ -0.95
PCDHGA3-201ENST00000253812 C22orf24Q9Y442 160 aa9.1□□□□□ -0.95
PCDHGA3-201ENST00000253812 PRR15Q8IV56 129 aa9.09□□□□□ -0.95
PCDHGA3-201ENST00000253812 LY6G6CO95867 125 aa9.08□□□□□ -0.96
PCDHGA3-201ENST00000253812 OXLD1Q5BKU9 147 aa9.08□□□□□ -0.96
PCDHGA3-201ENST00000253812 IGLV8-61A0A075B6I0 122 aa9.08□□□□□ -0.96
PCDHGA3-201ENST00000253812 IGLV1-51P01701 117 aa9.07□□□□□ -0.96
PCDHGA3-201ENST00000253812 LINC00476Q8WZB0 136 aa9.06□□□□□ -0.96
PCDHGA3-201ENST00000253812 LINC01556Q5JQF7 62 aa9.05□□□□□ -0.96
PCDHGA3-201ENST00000253812 LYPD5Q6UWN5 251 aa9.04□□□□□ -0.96
PCDHGA3-201ENST00000253812 MIR22HGQ0VDD5 57 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms