RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 LINC00167Q96N53 147 aa9.94□□□□□ -0.82
ZC3H4-201ENST00000253048 A0A087WYN8 130 aa9.92□□□□□ -0.82
ZC3H4-201ENST00000253048 K7EIL1 84 aa9.92□□□□□ -0.82
ZC3H4-201ENST00000253048 AMELXQ99217 191 aa9.91□□□□□ -0.82
ZC3H4-201ENST00000253048 ABCA2Q9BZC7 2435 aa9.9□□□□□ -0.82
ZC3H4-201ENST00000253048 CEP295Q9C0D2 2601 aa9.9□□□□□ -0.82
ZC3H4-201ENST00000253048 MYO9AB2RTY4 2548 aa9.9□□□□□ -0.82
ZC3H4-201ENST00000253048 Q8N3U1 123 aa9.9□□□□□ -0.82
ZC3H4-201ENST00000253048 C11orf72Q8NBR9 251 aa9.89□□□□□ -0.83
ZC3H4-201ENST00000253048 CCDC179H3BU77 68 aa9.89□□□□□ -0.83
ZC3H4-201ENST00000253048 LINC00313P59037 77 aa9.89□□□□□ -0.83
ZC3H4-201ENST00000253048 Q96NJ1 140 aa9.89□□□□□ -0.83
ZC3H4-201ENST00000253048 C6orf48Q9UBA6 75 aa9.88□□□□□ -0.83
ZC3H4-201ENST00000253048 Q8NAQ8 132 aa9.87□□□□□ -0.83
ZC3H4-201ENST00000253048 TP53AIP1Q9HCN2 124 aa9.87□□□□□ -0.83
ZC3H4-201ENST00000253048 SSBP3-AS1Q7Z2R9 100 aa9.86□□□□□ -0.83
ZC3H4-201ENST00000253048 COL4A2P08572 1712 aa9.86□□□□□ -0.83
ZC3H4-201ENST00000253048 A8MTW9 85 aa9.86□□□□□ -0.83
ZC3H4-201ENST00000253048 SMR3BP02814 79 aaPredicted RBP9.86□□□□□ -0.83
ZC3H4-201ENST00000253048 MYO18BQ8IUG5 2567 aa9.85□□□□□ -0.83
ZC3H4-201ENST00000253048 EPM2AB3EWF7 344 aa9.85□□□□□ -0.83
ZC3H4-201ENST00000253048 KIAA0087Q14695 138 aa9.85□□□□□ -0.83
ZC3H4-201ENST00000253048 URB1-AS1Q96HZ7 61 aa9.85□□□□□ -0.83
ZC3H4-201ENST00000253048 C5orf42Q9H799 3197 aa9.85□□□□□ -0.83
ZC3H4-201ENST00000253048 CXCL6P80162 114 aa9.84□□□□□ -0.83
ZC3H4-201ENST00000253048 BCE1O60756 84 aa9.84□□□□□ -0.83
ZC3H4-201ENST00000253048 KRTAP10-11P60412 298 aa9.84□□□□□ -0.83
ZC3H4-201ENST00000253048 C2orf91Q6ZV80 131 aa9.84□□□□□ -0.83
ZC3H4-201ENST00000253048 CRIPTQ9P021 101 aa9.84□□□□□ -0.83
ZC3H4-201ENST00000253048 Q9UF83 564 aa9.84□□□□□ -0.83
ZC3H4-201ENST00000253048 PRRC2CQ9Y520 2896 aaKnown RBP9.84□□□□□ -0.83
ZC3H4-201ENST00000253048 IGLV8-61A0A075B6I0 122 aa9.83□□□□□ -0.84
ZC3H4-201ENST00000253048 A0A087WVE0 104 aa9.83□□□□□ -0.84
ZC3H4-201ENST00000253048 APLNQ9ULZ1 77 aa9.82□□□□□ -0.84
ZC3H4-201ENST00000253048 C8orf87E5RJ46 101 aa9.81□□□□□ -0.84
ZC3H4-201ENST00000253048 BPTFQ12830 3046 aa9.81□□□□□ -0.84
ZC3H4-201ENST00000253048 LINC00304Q8N9R0 145 aa9.8□□□□□ -0.84
ZC3H4-201ENST00000253048 ADAMTSL4-AS1Q5T5F5 129 aa9.8□□□□□ -0.84
ZC3H4-201ENST00000253048 TSPEAR-AS2P59090 65 aa9.79□□□□□ -0.84
ZC3H4-201ENST00000253048 ANKRD11Q6UB99 2663 aaPredicted RBP9.78□□□□□ -0.84
ZC3H4-201ENST00000253048 DNAH10OSP0CZ25 163 aa9.78□□□□□ -0.84
ZC3H4-201ENST00000253048 CHD7Q9P2D1 2997 aa9.77□□□□□ -0.85
ZC3H4-201ENST00000253048 COX8CQ7Z4L0 72 aa9.77□□□□□ -0.85
ZC3H4-201ENST00000253048 TM2D3Q9BRN9 247 aa9.76□□□□□ -0.85
ZC3H4-201ENST00000253048 GVQW2A0A096LPI5 108 aaPredicted RBP9.75□□□□□ -0.85
ZC3H4-201ENST00000253048 TLN2Q9Y4G6 2542 aa9.75□□□□□ -0.85
ZC3H4-201ENST00000253048 HTTP42858 3142 aa9.75□□□□□ -0.85
ZC3H4-201ENST00000253048 BRCA2P51587 3418 aa9.73□□□□□ -0.85
ZC3H4-201ENST00000253048 SMIM29Q86T20 159 aa9.73□□□□□ -0.85
ZC3H4-201ENST00000253048 USP9XQ93008 2570 aaPredicted RBP9.73□□□□□ -0.85
ZC3H4-201ENST00000253048 MUC4Q99102 2169 aa9.72□□□□□ -0.85
ZC3H4-201ENST00000253048 SETD2Q9BYW2 2564 aaPredicted RBP9.72□□□□□ -0.85
ZC3H4-201ENST00000253048 TRAV22A0A0B4J277 110 aa9.71□□□□□ -0.85
ZC3H4-201ENST00000253048 Q6ZRX8 168 aa9.71□□□□□ -0.85
ZC3H4-201ENST00000253048 IGHV3OR16-9A0A0B4J2B5 98 aa9.71□□□□□ -0.85
ZC3H4-201ENST00000253048 A0A087WTM6 91 aa9.71□□□□□ -0.86
ZC3H4-201ENST00000253048 USP9YO00507 2555 aaPredicted RBP9.71□□□□□ -0.86
ZC3H4-201ENST00000253048 LRRK2Q5S007 2527 aa9.71□□□□□ -0.86
ZC3H4-201ENST00000253048 C9orf92A6NGG3 77 aa9.7□□□□□ -0.86
ZC3H4-201ENST00000253048 C19orf73Q9NVV2 129 aa9.7□□□□□ -0.86
ZC3H4-201ENST00000253048 LINC00476Q8WZB0 136 aa9.7□□□□□ -0.86
ZC3H4-201ENST00000253048 RBM12B-AS1Q9P1G2 102 aa9.69□□□□□ -0.86
ZC3H4-201ENST00000253048 LINC00528Q8N1L1 170 aa9.69□□□□□ -0.86
ZC3H4-201ENST00000253048 ST20-AS1Q8NBB2 130 aa9.69□□□□□ -0.86
ZC3H4-201ENST00000253048 A0A096LNJ9 63 aa9.68□□□□□ -0.86
ZC3H4-201ENST00000253048 MKI67P46013 3256 aaKnown RBP9.68□□□□□ -0.86
ZC3H4-201ENST00000253048 A0A0C4DFX4 3053 aa9.68□□□□□ -0.86
ZC3H4-201ENST00000253048 JMJD1CQ15652 2540 aa9.67□□□□□ -0.86
ZC3H4-201ENST00000253048 RANBP2P49792 3224 aaKnown RBP9.67□□□□□ -0.86
ZC3H4-201ENST00000253048 ELOF1P60002 83 aaKnown RBP9.67□□□□□ -0.86
ZC3H4-201ENST00000253048 FAM19A4Q96LR4 140 aa9.67□□□□□ -0.86
ZC3H4-201ENST00000253048 CHD8Q9HCK8 2581 aa9.67□□□□□ -0.86
ZC3H4-201ENST00000253048 AGRNO00468 2067 aa9.66□□□□□ -0.86
ZC3H4-201ENST00000253048 LINC01600Q96MT4 127 aa9.65□□□□□ -0.86
ZC3H4-201ENST00000253048 IGLV5-39A0A0G2JS06 123 aa9.65□□□□□ -0.86
ZC3H4-201ENST00000253048 H3BPC8 53 aa9.64□□□□□ -0.87
ZC3H4-201ENST00000253048 LINC01554Q52M75 96 aa9.63□□□□□ -0.87
ZC3H4-201ENST00000253048 SPTBN4Q9H254 2564 aa9.63□□□□□ -0.87
ZC3H4-201ENST00000253048 FAM168BA1KXE4 195 aa9.62□□□□□ -0.87
ZC3H4-201ENST00000253048 IGLV5-37A0A075B6J1 123 aa9.62□□□□□ -0.87
ZC3H4-201ENST00000253048 KRTAP10-3P60369 221 aa9.62□□□□□ -0.87
ZC3H4-201ENST00000253048 C9orf129Q5T035 196 aaKnown RBP9.62□□□□□ -0.87
ZC3H4-201ENST00000253048 LAMA3Q16787 3333 aa9.61□□□□□ -0.87
ZC3H4-201ENST00000253048 LUZP6Q538Z0 58 aa9.61□□□□□ -0.87
ZC3H4-201ENST00000253048 ABCA12Q86UK0 2595 aa9.61□□□□□ -0.87
ZC3H4-201ENST00000253048 M0R2T5 61 aa9.61□□□□□ -0.87
ZC3H4-201ENST00000253048 ZNF861PO60384 105 aa9.6□□□□□ -0.87
ZC3H4-201ENST00000253048 LOC101927531A0A1B0GV80 90 aa9.59□□□□□ -0.87
ZC3H4-201ENST00000253048 A0A1B0GW54 56 aa9.59□□□□□ -0.87
ZC3H4-201ENST00000253048 LINC00846Q9NV44 126 aa9.57□□□□□ -0.88
ZC3H4-201ENST00000253048 OBSCN-AS1Q96MR7 158 aa9.57□□□□□ -0.88
ZC3H4-201ENST00000253048 IGLV6-57P01721 117 aa9.56□□□□□ -0.88
ZC3H4-201ENST00000253048 CHD9Q3L8U1 2897 aa9.55□□□□□ -0.88
ZC3H4-201ENST00000253048 DSCR10P59022 87 aa9.55□□□□□ -0.88
ZC3H4-201ENST00000253048 CASC10Q5T4H9 136 aa9.55□□□□□ -0.88
ZC3H4-201ENST00000253048 PRO0628Q9UI54 55 aa9.55□□□□□ -0.88
ZC3H4-201ENST00000253048 UQCR11O14957 56 aa9.55□□□□□ -0.88
ZC3H4-201ENST00000253048 IGLV7-43P04211 117 aa9.54□□□□□ -0.88
ZC3H4-201ENST00000253048 LAMA2P24043 3122 aaKnown RBP9.53□□□□□ -0.88
ZC3H4-201ENST00000253048 ZFYVE26Q68DK2 2539 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms