RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 COA6Q5JTJ3 125 aaKnown RBP7.87□□□□□ -1.15
APOBEC3A-201ENST00000249116 GAGE2EQ4V326 116 aa7.86□□□□□ -1.15
APOBEC3A-201ENST00000249116 FAM19A5Q7Z5A7 132 aaPredicted RBP7.86□□□□□ -1.15
APOBEC3A-201ENST00000249116 GAGE2DQ9UEU5 116 aa7.86□□□□□ -1.15
APOBEC3A-201ENST00000249116 RNF213Q63HN8 5207 aa7.85□□□□□ -1.15
APOBEC3A-201ENST00000249116 TMEM223A0PJW6 202 aa7.85□□□□□ -1.15
APOBEC3A-201ENST00000249116 FAM168BA1KXE4 195 aa7.85□□□□□ -1.15
APOBEC3A-201ENST00000249116 H0Y9J4 135 aa7.85□□□□□ -1.15
APOBEC3A-201ENST00000249116 MAP1LC3CQ9BXW4 147 aa7.85□□□□□ -1.15
APOBEC3A-201ENST00000249116 NDUFC2-KCTD14E9PQ53 114 aa7.84□□□□□ -1.15
APOBEC3A-201ENST00000249116 UBE2BP63146 152 aa7.84□□□□□ -1.15
APOBEC3A-201ENST00000249116 PRR26Q8N8Z3 221 aa7.84□□□□□ -1.15
APOBEC3A-201ENST00000249116 KRTAP4-8A0A0G2JLE6 195 aa7.83□□□□□ -1.16
APOBEC3A-201ENST00000249116 PLNP26678 52 aa7.83□□□□□ -1.16
APOBEC3A-201ENST00000249116 M0QXV9 152 aa7.82□□□□□ -1.16
APOBEC3A-201ENST00000249116 DPM2O94777 84 aa7.82□□□□□ -1.16
APOBEC3A-201ENST00000249116 PMCHL2Q9BQD1 86 aa7.82□□□□□ -1.16
APOBEC3A-201ENST00000249116 IGLV1-50A0A075B6I6 118 aa7.81□□□□□ -1.16
APOBEC3A-201ENST00000249116 SYS1-DBNDD2H3BUS1 97 aa7.81□□□□□ -1.16
APOBEC3A-201ENST00000249116 IGKCP01834 107 aa7.81□□□□□ -1.16
APOBEC3A-201ENST00000249116 KRTAP11-1Q8IUC1 163 aa7.81□□□□□ -1.16
APOBEC3A-201ENST00000249116 C9orf129Q5T035 196 aaKnown RBP7.8□□□□□ -1.16
APOBEC3A-201ENST00000249116 SFTA2Q6UW10 78 aa7.79□□□□□ -1.16
APOBEC3A-201ENST00000249116 ZNF625Q96I27 306 aaPredicted RBP7.79□□□□□ -1.16
APOBEC3A-201ENST00000249116 C3orf79P0CE67 100 aa7.78□□□□□ -1.16
APOBEC3A-201ENST00000249116 LINC01545Q5VT33 79 aa7.78□□□□□ -1.16
APOBEC3A-201ENST00000249116 PET117Q6UWS5 81 aa7.78□□□□□ -1.16
APOBEC3A-201ENST00000249116 KRTAP7-1Q8IUC3 87 aa7.78□□□□□ -1.16
APOBEC3A-201ENST00000249116 RPL13AP40429 203 aaKnown RBP7.78□□□□□ -1.16
APOBEC3A-201ENST00000249116 XAGE1AQ9HD64 81 aa7.78□□□□□ -1.16
APOBEC3A-201ENST00000249116 KRTAP1-4P0C5Y4 121 aa7.77□□□□□ -1.17
APOBEC3A-201ENST00000249116 KRTDAPP60985 99 aa7.77□□□□□ -1.17
APOBEC3A-201ENST00000249116 HERVK_113P61574 105 aa7.77□□□□□ -1.17
APOBEC3A-201ENST00000249116 ERG28Q9UKR5 140 aa7.77□□□□□ -1.17
APOBEC3A-201ENST00000249116 LEPROTO15243 131 aa7.76□□□□□ -1.17
APOBEC3A-201ENST00000249116 PFN2P35080 140 aa7.76□□□□□ -1.17
APOBEC3A-201ENST00000249116 TSPEAR-AS2P59090 65 aa7.76□□□□□ -1.17
APOBEC3A-201ENST00000249116 HIST3H2BBQ8N257 126 aa7.76□□□□□ -1.17
APOBEC3A-201ENST00000249116 S100A6P06703 90 aa7.75□□□□□ -1.17
APOBEC3A-201ENST00000249116 COX17Q14061 63 aa7.75□□□□□ -1.17
APOBEC3A-201ENST00000249116 PLEKHB2Q96CS7 222 aa7.75□□□□□ -1.17
APOBEC3A-201ENST00000249116 LBHQ53QV2 105 aaPredicted RBP7.74□□□□□ -1.17
APOBEC3A-201ENST00000249116 NDUFA12Q9UI09 145 aa7.74□□□□□ -1.17
APOBEC3A-201ENST00000249116 J3QQQ9 107 aa7.73□□□□□ -1.17
APOBEC3A-201ENST00000249116 ZNF861PO60384 105 aa7.73□□□□□ -1.17
APOBEC3A-201ENST00000249116 S100A2P29034 98 aa7.73□□□□□ -1.17
APOBEC3A-201ENST00000249116 HERV-K104P63124 156 aa7.73□□□□□ -1.17
APOBEC3A-201ENST00000249116 HIST1H2BLQ99880 126 aa7.73□□□□□ -1.17
APOBEC3A-201ENST00000249116 C22orf24Q9Y442 160 aa7.73□□□□□ -1.17
APOBEC3A-201ENST00000249116 MYMXA0A1B0GTQ4 84 aa7.72□□□□□ -1.17
APOBEC3A-201ENST00000249116 C20orf202A1L168 122 aa7.72□□□□□ -1.17
APOBEC3A-201ENST00000249116 E9PLD3 99 aa7.72□□□□□ -1.17
APOBEC3A-201ENST00000249116 LGALS3P17931 250 aaKnown RBP7.72□□□□□ -1.17
APOBEC3A-201ENST00000249116 PRR4Q16378 134 aa7.72□□□□□ -1.17
APOBEC3A-201ENST00000249116 SVIPQ8NHG7 77 aa7.72□□□□□ -1.17
APOBEC3A-201ENST00000249116 NMUP48645 174 aa7.71□□□□□ -1.17
APOBEC3A-201ENST00000249116 MEIG1Q5JSS6 88 aa7.71□□□□□ -1.17
APOBEC3A-201ENST00000249116 SND1-IT1Q9HBX3 110 aa7.71□□□□□ -1.17
APOBEC3A-201ENST00000249116 LINC00158P58513 81 aa7.7□□□□□ -1.18
APOBEC3A-201ENST00000249116 SNRPEP62304 92 aaKnown RBP7.7□□□□□ -1.18
APOBEC3A-201ENST00000249116 TP73-AS1Q9UF72 201 aa7.7□□□□□ -1.18
APOBEC3A-201ENST00000249116 A0A0U1RRA0 63 aa7.69□□□□□ -1.18
APOBEC3A-201ENST00000249116 SMIM13P0DJ93 91 aa7.69□□□□□ -1.18
APOBEC3A-201ENST00000249116 MRPL55Q7Z7F7 128 aaKnown RBP7.69□□□□□ -1.18
APOBEC3A-201ENST00000249116 C5orf52A6NGY3 159 aa7.69□□□□□ -1.18
APOBEC3A-201ENST00000249116 LINC00587B1AMM8 73 aa7.69□□□□□ -1.18
APOBEC3A-201ENST00000249116 RPL28P46779 137 aaKnown RBP7.69□□□□□ -1.18
APOBEC3A-201ENST00000249116 IGLV5-37A0A075B6J1 123 aa7.68□□□□□ -1.18
APOBEC3A-201ENST00000249116 TMEM238LA0A1B0GVL6 79 aa7.68□□□□□ -1.18
APOBEC3A-201ENST00000249116 AKR1D1P51857 326 aa7.68□□□□□ -1.18
APOBEC3A-201ENST00000249116 ATOH7Q8N100 152 aa7.68□□□□□ -1.18
APOBEC3A-201ENST00000249116 IGKV2D-26A0A0A0MRZ7 120 aa7.67□□□□□ -1.18
APOBEC3A-201ENST00000249116 MIR7-3HGQ8N6C7 128 aa7.67□□□□□ -1.18
APOBEC3A-201ENST00000249116 NKAPP1Q8N9T2 125 aa7.67□□□□□ -1.18
APOBEC3A-201ENST00000249116 LPAP08519 4548 aa7.66□□□□□ -1.18
APOBEC3A-201ENST00000249116 BCE1O60756 84 aa7.66□□□□□ -1.18
APOBEC3A-201ENST00000249116 VPREB1P12018 145 aa7.66□□□□□ -1.18
APOBEC3A-201ENST00000249116 Q8NDZ9 215 aa7.66□□□□□ -1.18
APOBEC3A-201ENST00000249116 A0A0J9YXY3 114 aa7.65□□□□□ -1.18
APOBEC3A-201ENST00000249116 TSPAN13O95857 204 aa7.64□□□□□ -1.19
APOBEC3A-201ENST00000249116 CRYGAP11844 174 aa7.64□□□□□ -1.19
APOBEC3A-201ENST00000249116 RPL24P83731 157 aaKnown RBP7.64□□□□□ -1.19
APOBEC3A-201ENST00000249116 ANKRD39Q53RE8 183 aa7.64□□□□□ -1.19
APOBEC3A-201ENST00000249116 DAND5Q8N907 189 aa7.64□□□□□ -1.19
APOBEC3A-201ENST00000249116 LINC00167Q96N53 147 aa7.64□□□□□ -1.19
APOBEC3A-201ENST00000249116 GAGE10A6NGK3 116 aa7.63□□□□□ -1.19
APOBEC3A-201ENST00000249116 RPL37AP8A6NKH3 93 aa7.63□□□□□ -1.19
APOBEC3A-201ENST00000249116 ZNF815PA8K554 130 aa7.63□□□□□ -1.19
APOBEC3A-201ENST00000249116 TYMSOSQ8TAI1 123 aa7.63□□□□□ -1.19
APOBEC3A-201ENST00000249116 TTTY13Q9BZ97 58 aa7.63□□□□□ -1.19
APOBEC3A-201ENST00000249116 LCE1DQ5T752 114 aa7.62□□□□□ -1.19
APOBEC3A-201ENST00000249116 A0A087X002 238 aa7.61□□□□□ -1.19
APOBEC3A-201ENST00000249116 UBE2AP49459 152 aa7.61□□□□□ -1.19
APOBEC3A-201ENST00000249116 BOD1L2Q8IYS8 172 aa7.61□□□□□ -1.19
APOBEC3A-201ENST00000249116 LOC107984156A0A0G2JMH3 177 aa7.61□□□□□ -1.19
APOBEC3A-201ENST00000249116 A0A0U1RQV1 116 aa7.61□□□□□ -1.19
APOBEC3A-201ENST00000249116 ARL17AQ8IVW1 177 aa7.61□□□□□ -1.19
APOBEC3A-201ENST00000249116 IGKV2-28A0A075B6P5 120 aa7.6□□□□□ -1.19
APOBEC3A-201ENST00000249116 TIMM17BO60830 172 aa7.6□□□□□ -1.19
APOBEC3A-201ENST00000249116 IGKV2D-28P01615 120 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms