RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 FUSP35637 526 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTPN12-201ENST00000248594 CELA1Q9UNI1 258 aa12.68□□□□□ -0.38
PTPN12-201ENST00000248594 BPY2O14599 106 aa12.68□□□□□ -0.38
PTPN12-201ENST00000248594 C1orf158Q8N1D5 194 aa12.67□□□□□ -0.38
PTPN12-201ENST00000248594 NBPF19A0A087WUL8 3843 aa12.67□□□□□ -0.38
PTPN12-201ENST00000248594 TRBV10-3A0A0K0K1G6 114 aa12.66□□□□□ -0.38
PTPN12-201ENST00000248594 HIGD2AQ9BW72 106 aa12.65□□□□□ -0.38
PTPN12-201ENST00000248594 IGHV4-28A0A0C4DH34 117 aa12.65□□□□□ -0.39
PTPN12-201ENST00000248594 LINC00959A0A1B0GUT2 108 aa12.65□□□□□ -0.39
PTPN12-201ENST00000248594 BBC3Q96PG8 261 aaPredicted RBP12.64□□□□□ -0.39
PTPN12-201ENST00000248594 WFDC10AQ9H1F0 79 aa12.64□□□□□ -0.39
PTPN12-201ENST00000248594 EPM2AB3EWF7 344 aa12.63□□□□□ -0.39
PTPN12-201ENST00000248594 ZNF561-AS1K7EIQ3 104 aa12.63□□□□□ -0.39
PTPN12-201ENST00000248594 ESM1Q9NQ30 184 aa12.62□□□□□ -0.39
PTPN12-201ENST00000248594 PMAIP1Q13794 54 aa12.62□□□□□ -0.39
PTPN12-201ENST00000248594 TRBV6-8A0A0A6YYG3 113 aa12.61□□□□□ -0.39
PTPN12-201ENST00000248594 C3orf84H3BNL1 204 aa12.61□□□□□ -0.39
PTPN12-201ENST00000248594 ESRGQ1W209 222 aa12.61□□□□□ -0.39
PTPN12-201ENST00000248594 LINC00575Q6W349 94 aa12.61□□□□□ -0.39
PTPN12-201ENST00000248594 UBR5O95071 2799 aaPredicted RBP12.61□□□□□ -0.39
PTPN12-201ENST00000248594 Q8NDZ9 215 aa12.6□□□□□ -0.39
PTPN12-201ENST00000248594 LINC01006Q8NI28 216 aa12.6□□□□□ -0.39
PTPN12-201ENST00000248594 ITPR2Q14571 2701 aa12.6□□□□□ -0.39
PTPN12-201ENST00000248594 LY6G6DO95868 133 aa12.6□□□□□ -0.39
PTPN12-201ENST00000248594 FAM19A3Q7Z5A8 133 aa12.59□□□□□ -0.39
PTPN12-201ENST00000248594 FAM30AQ9NZY2 134 aa12.59□□□□□ -0.39
PTPN12-201ENST00000248594 XAGE1AQ9HD64 81 aa12.59□□□□□ -0.39
PTPN12-201ENST00000248594 PRYO14603 147 aa12.59□□□□□ -0.39
PTPN12-201ENST00000248594 NDUFC1O43677 76 aa12.59□□□□□ -0.39
PTPN12-201ENST00000248594 MUC7Q8TAX7 377 aa12.59□□□□□ -0.39
PTPN12-201ENST00000248594 TRBV7-4A0A0J9YYF1 115 aa12.58□□□□□ -0.4
PTPN12-201ENST00000248594 ODF3L2Q3SX64 289 aa12.57□□□□□ -0.4
PTPN12-201ENST00000248594 HECTD1Q9ULT8 2610 aa12.56□□□□□ -0.4
PTPN12-201ENST00000248594 VWFP04275 2813 aa12.56□□□□□ -0.4
PTPN12-201ENST00000248594 C6orf223Q8N319 242 aa12.56□□□□□ -0.4
PTPN12-201ENST00000248594 PDZD2O15018 2839 aa12.55□□□□□ -0.4
PTPN12-201ENST00000248594 DEFB105AQ8NG35 78 aa12.54□□□□□ -0.4
PTPN12-201ENST00000248594 ANGP03950 147 aaKnown RBP12.53□□□□□ -0.4
PTPN12-201ENST00000248594 LINC00167Q96N53 147 aa12.53□□□□□ -0.4
PTPN12-201ENST00000248594 B4DSR2 109 aa12.53□□□□□ -0.4
PTPN12-201ENST00000248594 UNC79Q9P2D8 2635 aa12.53□□□□□ -0.4
PTPN12-201ENST00000248594 GYPEP15421 78 aa12.53□□□□□ -0.4
PTPN12-201ENST00000248594 DEFB114Q30KQ6 69 aa12.53□□□□□ -0.4
PTPN12-201ENST00000248594 UNQ6190/PRO20217Q6UXQ8 127 aa12.52□□□□□ -0.4
PTPN12-201ENST00000248594 FASNP49327 2511 aaKnown RBP12.52□□□□□ -0.41
PTPN12-201ENST00000248594 CXCL6P80162 114 aa12.5□□□□□ -0.41
PTPN12-201ENST00000248594 C10orf25Q5T742 122 aa12.5□□□□□ -0.41
PTPN12-201ENST00000248594 ATRQ13535 2644 aa12.5□□□□□ -0.41
PTPN12-201ENST00000248594 KLK12Q9UKR0 248 aa12.5□□□□□ -0.41
PTPN12-201ENST00000248594 TEP1Q99973 2627 aaKnown RBP12.5□□□□□ -0.41
PTPN12-201ENST00000248594 ATP5EP56381 51 aaPredicted RBP12.5□□□□□ -0.41
PTPN12-201ENST00000248594 CD164L2Q6UWJ8 174 aa12.49□□□□□ -0.41
PTPN12-201ENST00000248594 KRTAP10-9P60411 292 aa12.49□□□□□ -0.41
PTPN12-201ENST00000248594 Q8IZM0 81 aa12.48□□□□□ -0.41
PTPN12-201ENST00000248594 HIVEP1P15822 2718 aa12.48□□□□□ -0.41
PTPN12-201ENST00000248594 LOC110117498A0A087WWA1 95 aa12.47□□□□□ -0.41
PTPN12-201ENST00000248594 CHCHD10Q8WYQ3 142 aaPredicted RBP12.47□□□□□ -0.41
PTPN12-201ENST00000248594 BCE1O60756 84 aa12.46□□□□□ -0.42
PTPN12-201ENST00000248594 A8MU10 97 aa12.44□□□□□ -0.42
PTPN12-201ENST00000248594 DEFB4AO15263 64 aa12.44□□□□□ -0.42
PTPN12-201ENST00000248594 SPTSSBQ8NFR3 76 aa12.44□□□□□ -0.42
PTPN12-201ENST00000248594 KMT2BQ9UMN6 2715 aaPredicted RBP12.44□□□□□ -0.42
PTPN12-201ENST00000248594 DIRC1Q969H9 104 aa12.44□□□□□ -0.42
PTPN12-201ENST00000248594 ZNF702PQ9H963 129 aa12.43□□□□□ -0.42
PTPN12-201ENST00000248594 SPAG11BQ08648 103 aa12.42□□□□□ -0.42
PTPN12-201ENST00000248594 SMIM29Q86T20 159 aa12.42□□□□□ -0.42
PTPN12-201ENST00000248594 PLAC8L1A1L4L8 177 aa12.42□□□□□ -0.42
PTPN12-201ENST00000248594 LINC01356Q8N9X3 169 aa12.42□□□□□ -0.42
PTPN12-201ENST00000248594 HTN3P15516 51 aa12.41□□□□□ -0.42
PTPN12-201ENST00000248594 HELZ2Q9BYK8 2649 aaKnown RBP12.41□□□□□ -0.42
PTPN12-201ENST00000248594 PDE6GP18545 87 aa12.4□□□□□ -0.42
PTPN12-201ENST00000248594 Q6ZTC4 211 aa12.4□□□□□ -0.42
PTPN12-201ENST00000248594 COX7BP24311 80 aa12.39□□□□□ -0.43
PTPN12-201ENST00000248594 C1orf64Q8NEQ6 169 aa12.39□□□□□ -0.43
PTPN12-201ENST00000248594 IGKV4-1P06312 121 aa12.38□□□□□ -0.43
PTPN12-201ENST00000248594 HIGD2BQ4VC39 106 aa12.38□□□□□ -0.43
PTPN12-201ENST00000248594 C16orf74Q96GX8 76 aa12.38□□□□□ -0.43
PTPN12-201ENST00000248594 A8MUN3 132 aa12.38□□□□□ -0.43
PTPN12-201ENST00000248594 CYSRT1A8MQ03 144 aa12.37□□□□□ -0.43
PTPN12-201ENST00000248594 KIAA0087Q14695 138 aa12.37□□□□□ -0.43
PTPN12-201ENST00000248594 Q6ZRP5 223 aa12.37□□□□□ -0.43
PTPN12-201ENST00000248594 REG3AQ06141 175 aa12.37□□□□□ -0.43
PTPN12-201ENST00000248594 MRPL55Q7Z7F7 128 aaKnown RBP12.36□□□□□ -0.43
PTPN12-201ENST00000248594 ZNF73O43830 326 aaPredicted RBP12.36□□□□□ -0.43
PTPN12-201ENST00000248594 CD164Q04900 197 aa12.36□□□□□ -0.43
PTPN12-201ENST00000248594 C4orf48Q5BLP8 95 aa12.36□□□□□ -0.43
PTPN12-201ENST00000248594 DEFB116Q30KQ4 102 aa12.36□□□□□ -0.43
PTPN12-201ENST00000248594 OCR1Q9BZK8 76 aa12.35□□□□□ -0.43
PTPN12-201ENST00000248594 PKD1L1Q8TDX9 2849 aa12.35□□□□□ -0.43
PTPN12-201ENST00000248594 TRAV22A0A0B4J277 110 aa12.31□□□□□ -0.44
PTPN12-201ENST00000248594 BAHCC1Q9P281 2608 aa12.31□□□□□ -0.44
PTPN12-201ENST00000248594 TENM1Q9UKZ4 2725 aa12.31□□□□□ -0.44
PTPN12-201ENST00000248594 hDV103S1A0JD37 113 aa12.31□□□□□ -0.44
PTPN12-201ENST00000248594 GIG44P09565 113 aaPredicted RBP12.3□□□□□ -0.44
PTPN12-201ENST00000248594 C9orf66Q5T8R8 295 aa12.3□□□□□ -0.44
PTPN12-201ENST00000248594 LINC00612Q8N6U2 182 aa12.3□□□□□ -0.44
PTPN12-201ENST00000248594 COX17Q14061 63 aa12.3□□□□□ -0.44
PTPN12-201ENST00000248594 PRR15Q8IV56 129 aa12.28□□□□□ -0.44
PTPN12-201ENST00000248594 CHKB-CPT1BH3BT56 60 aa12.27□□□□□ -0.44
PTPN12-201ENST00000248594 CCL24O00175 119 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms