RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 DEFB130AP0DP74 79 aa7.06□□□□□ -1.28
MCM3-201ENST00000229854 PDE6GP18545 87 aa7.05□□□□□ -1.28
MCM3-201ENST00000229854 C16orf74Q96GX8 76 aa7.05□□□□□ -1.28
MCM3-201ENST00000229854 USP9YO00507 2555 aaPredicted RBP7.05□□□□□ -1.28
MCM3-201ENST00000229854 POLQO75417 2590 aa7.05□□□□□ -1.28
MCM3-201ENST00000229854 ZNF462Q96JM2 2506 aa7.05□□□□□ -1.28
MCM3-201ENST00000229854 FUSP35637 526 aaKnown RBP eCLIP7.04□□□□□ -1.28
MCM3-201ENST00000229854 WFDC10AQ9H1F0 79 aa7.04□□□□□ -1.28
MCM3-201ENST00000229854 SETD2Q9BYW2 2564 aaPredicted RBP7.04□□□□□ -1.28
MCM3-201ENST00000229854 PLAC8L1A1L4L8 177 aa7.04□□□□□ -1.28
MCM3-201ENST00000229854 PRYO14603 147 aa7.03□□□□□ -1.28
MCM3-201ENST00000229854 COX17Q14061 63 aa7.03□□□□□ -1.28
MCM3-201ENST00000229854 LRCOL1A6NCL2 159 aa7.03□□□□□ -1.28
MCM3-201ENST00000229854 GYPEP15421 78 aa7.03□□□□□ -1.28
MCM3-201ENST00000229854 ESRGQ1W209 222 aa7.03□□□□□ -1.28
MCM3-201ENST00000229854 ACACBO00763 2458 aa7.03□□□□□ -1.28
MCM3-201ENST00000229854 KIAA0087Q14695 138 aa7.02□□□□□ -1.29
MCM3-201ENST00000229854 C9orf66Q5T8R8 295 aa7.02□□□□□ -1.29
MCM3-201ENST00000229854 LRRK2Q5S007 2527 aa7.02□□□□□ -1.29
MCM3-201ENST00000229854 CHCHD10Q8WYQ3 142 aaPredicted RBP7.01□□□□□ -1.29
MCM3-201ENST00000229854 HIGD2AQ9BW72 106 aa7.01□□□□□ -1.29
MCM3-201ENST00000229854 ITPR3Q14573 2671 aa7.01□□□□□ -1.29
MCM3-201ENST00000229854 SONP18583 2426 aaKnown RBP7.01□□□□□ -1.29
MCM3-201ENST00000229854 PDZD2O15018 2839 aa7.01□□□□□ -1.29
MCM3-201ENST00000229854 GIG44P09565 113 aaPredicted RBP7□□□□□ -1.29
MCM3-201ENST00000229854 UNQ6190/PRO20217Q6UXQ8 127 aa7□□□□□ -1.29
MCM3-201ENST00000229854 LINC01006Q8NI28 216 aa7□□□□□ -1.29
MCM3-201ENST00000229854 ANGP03950 147 aaKnown RBP7□□□□□ -1.29
MCM3-201ENST00000229854 C10orf25Q5T742 122 aa7□□□□□ -1.29
MCM3-201ENST00000229854 TENM4Q6N022 2769 aa7□□□□□ -1.29
MCM3-201ENST00000229854 CD164L2Q6UWJ8 174 aa6.99□□□□□ -1.29
MCM3-201ENST00000229854 CHD6Q8TD26 2715 aa6.99□□□□□ -1.29
MCM3-201ENST00000229854 DNAJC9-AS1A6NH13 148 aa6.99□□□□□ -1.29
MCM3-201ENST00000229854 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.99□□□□□ -1.29
MCM3-201ENST00000229854 DIRC1Q969H9 104 aa6.99□□□□□ -1.29
MCM3-201ENST00000229854 PTPN13Q12923 2485 aa6.99□□□□□ -1.29
MCM3-201ENST00000229854 ESM1Q9NQ30 184 aa6.98□□□□□ -1.29
MCM3-201ENST00000229854 A0A1B0GUV1 79 aa6.98□□□□□ -1.29
MCM3-201ENST00000229854 KRTAP1-1Q07627 177 aa6.98□□□□□ -1.29
MCM3-201ENST00000229854 ZFYVE26Q68DK2 2539 aa6.98□□□□□ -1.29
MCM3-201ENST00000229854 JMJD1CQ15652 2540 aa6.98□□□□□ -1.29
MCM3-201ENST00000229854 ERC2-IT1O76042 136 aa6.97□□□□□ -1.29
MCM3-201ENST00000229854 XAGE1AQ9HD64 81 aa6.97□□□□□ -1.29
MCM3-201ENST00000229854 ABCA12Q86UK0 2595 aa6.97□□□□□ -1.29
MCM3-201ENST00000229854 SETXQ7Z333 2677 aaKnown RBP6.97□□□□□ -1.29
MCM3-201ENST00000229854 IGLV6-57P01721 117 aa6.97□□□□□ -1.29
MCM3-201ENST00000229854 SPAG11BQ08648 103 aa6.97□□□□□ -1.29
MCM3-201ENST00000229854 IGHV4-28A0A0C4DH34 117 aa6.97□□□□□ -1.29
MCM3-201ENST00000229854 H3BQ85 93 aa6.97□□□□□ -1.29
MCM3-201ENST00000229854 COX7BP24311 80 aa6.97□□□□□ -1.29
MCM3-201ENST00000229854 Q6ZTC4 211 aa6.97□□□□□ -1.29
MCM3-201ENST00000229854 CELA1Q9UNI1 258 aa6.97□□□□□ -1.29
MCM3-201ENST00000229854 MYO9AB2RTY4 2548 aa6.97□□□□□ -1.29
MCM3-201ENST00000229854 IGKV4-1P06312 121 aa6.96□□□□□ -1.29
MCM3-201ENST00000229854 REG3AQ06141 175 aa6.96□□□□□ -1.29
MCM3-201ENST00000229854 TLN2Q9Y4G6 2542 aa6.96□□□□□ -1.3
MCM3-201ENST00000229854 C3orf84H3BNL1 204 aa6.96□□□□□ -1.3
MCM3-201ENST00000229854 OCR1Q9BZK8 76 aa6.96□□□□□ -1.3
MCM3-201ENST00000229854 FAM30AQ9NZY2 134 aa6.96□□□□□ -1.3
MCM3-201ENST00000229854 NAV2Q8IVL1 2488 aa6.96□□□□□ -1.3
MCM3-201ENST00000229854 NF1P21359 2839 aa6.96□□□□□ -1.3
MCM3-201ENST00000229854 CYSRT1A8MQ03 144 aa6.95□□□□□ -1.3
MCM3-201ENST00000229854 CCL24O00175 119 aa6.95□□□□□ -1.3
MCM3-201ENST00000229854 ZNF73O43830 326 aaPredicted RBP6.95□□□□□ -1.3
MCM3-201ENST00000229854 FAM208BQ5VWN6 2430 aa6.95□□□□□ -1.3
MCM3-201ENST00000229854 NIPBLQ6KC79 2804 aaeCLIP6.94□□□□□ -1.35e-7■■■■□ 20.9
MCM3-201ENST00000229854 C19orf73Q9NVV2 129 aa6.94□□□□□ -1.3
MCM3-201ENST00000229854 PMAIP1Q13794 54 aa6.94□□□□□ -1.3
MCM3-201ENST00000229854 FN1P02751 2386 aaKnown RBP6.94□□□□□ -1.3
MCM3-201ENST00000229854 PSPHP1O15172 72 aa6.93□□□□□ -1.3
MCM3-201ENST00000229854 KLK12Q9UKR0 248 aa6.93□□□□□ -1.3
MCM3-201ENST00000229854 PRB2P02812 416 aaPredicted RBP6.93□□□□□ -1.3
MCM3-201ENST00000229854 EPG5Q9HCE0 2579 aa6.93□□□□□ -1.3
MCM3-201ENST00000229854 HIGD2BQ4VC39 106 aa6.92□□□□□ -1.3
MCM3-201ENST00000229854 CSNK1G2-AS1Q8NCQ2 148 aa6.92□□□□□ -1.3
MCM3-201ENST00000229854 PRO0255Q9UI72 69 aa6.91□□□□□ -1.3
MCM3-201ENST00000229854 FLNAP21333 2647 aaKnown RBP6.91□□□□□ -1.3
MCM3-201ENST00000229854 IGLV1-51P01701 117 aa6.91□□□□□ -1.3
MCM3-201ENST00000229854 PRR4Q16378 134 aa6.91□□□□□ -1.3
MCM3-201ENST00000229854 SMIM29Q86T20 159 aa6.91□□□□□ -1.3
MCM3-201ENST00000229854 hDV103S1A0JD37 113 aa6.9□□□□□ -1.3
MCM3-201ENST00000229854 DEFB105AQ8NG35 78 aa6.9□□□□□ -1.3
MCM3-201ENST00000229854 CMC4P56277 68 aaPredicted RBP6.9□□□□□ -1.31
MCM3-201ENST00000229854 ELOF1P60002 83 aaKnown RBP6.9□□□□□ -1.31
MCM3-201ENST00000229854 PRR15Q8IV56 129 aa6.9□□□□□ -1.31
MCM3-201ENST00000229854 C1orf64Q8NEQ6 169 aa6.9□□□□□ -1.31
MCM3-201ENST00000229854 Q6ZRP5 223 aa6.89□□□□□ -1.31
MCM3-201ENST00000229854 LINC00612Q8N6U2 182 aa6.88□□□□□ -1.31
MCM3-201ENST00000229854 A0A0J9YWU9 116 aa6.88□□□□□ -1.31
MCM3-201ENST00000229854 IGHV4-30-4P0DP06 118 aa6.88□□□□□ -1.31
MCM3-201ENST00000229854 DEFB4AO15263 64 aa6.87□□□□□ -1.31
MCM3-201ENST00000229854 C6orf48Q9UBA6 75 aa6.87□□□□□ -1.31
MCM3-201ENST00000229854 KMT2BQ9UMN6 2715 aaPredicted RBP6.85□□□□□ -1.31
MCM3-201ENST00000229854 Q1T7F1 81 aa6.85□□□□□ -1.31
MCM3-201ENST00000229854 TRAV22A0A0B4J277 110 aa6.84□□□□□ -1.31
MCM3-201ENST00000229854 HTN3P15516 51 aa6.84□□□□□ -1.31
MCM3-201ENST00000229854 Q6ZRU5 148 aa6.84□□□□□ -1.31
MCM3-201ENST00000229854 LINC00528Q8N1L1 170 aa6.83□□□□□ -1.32
MCM3-201ENST00000229854 M0R378 163 aa6.82□□□□□ -1.32
MCM3-201ENST00000229854 KRTAP10-3P60369 221 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms