RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 H7BZZ5 65 aa6.54□□□□□ -1.36
HLA-DOA-201ENST00000229829 CSNK1G2-AS1Q8NCQ2 148 aa6.54□□□□□ -1.36
HLA-DOA-201ENST00000229829 F8P00451 2351 aa6.54□□□□□ -1.36
HLA-DOA-201ENST00000229829 LINC01006Q8NI28 216 aa6.54□□□□□ -1.36
HLA-DOA-201ENST00000229829 C16orf74Q96GX8 76 aa6.54□□□□□ -1.36
HLA-DOA-201ENST00000229829 NDUFC2-KCTD14E9PQ53 114 aa6.53□□□□□ -1.36
HLA-DOA-201ENST00000229829 IGHV3OR16-9A0A0B4J2B5 98 aa6.53□□□□□ -1.36
HLA-DOA-201ENST00000229829 TRBV6-4A0A1B0GX49 114 aa6.53□□□□□ -1.36
HLA-DOA-201ENST00000229829 A0A087WZ39 114 aa6.53□□□□□ -1.36
HLA-DOA-201ENST00000229829 TRBV6-8A0A0A6YYG3 113 aa6.53□□□□□ -1.36
HLA-DOA-201ENST00000229829 FP248Q71RG6 208 aaPredicted RBP6.53□□□□□ -1.36
HLA-DOA-201ENST00000229829 HIVEP2P31629 2446 aa6.53□□□□□ -1.36
HLA-DOA-201ENST00000229829 DEFB130BP0DP73 79 aa6.52□□□□□ -1.37
HLA-DOA-201ENST00000229829 DEFB130AP0DP74 79 aa6.52□□□□□ -1.37
HLA-DOA-201ENST00000229829 IGLV1-51P01701 117 aa6.51□□□□□ -1.37
HLA-DOA-201ENST00000229829 LINC00482Q8N8I6 264 aa6.51□□□□□ -1.37
HLA-DOA-201ENST00000229829 LYPD5Q6UWN5 251 aa6.51□□□□□ -1.37
HLA-DOA-201ENST00000229829 TRAV7A0A075B6U4 112 aa6.51□□□□□ -1.37
HLA-DOA-201ENST00000229829 A0A096LPF7 62 aa6.5□□□□□ -1.37
HLA-DOA-201ENST00000229829 JMJD7-PLA2G4BH0Y9G9 81 aa6.5□□□□□ -1.37
HLA-DOA-201ENST00000229829 SERTAD4-AS1Q5TG53 156 aa6.5□□□□□ -1.37
HLA-DOA-201ENST00000229829 TM2D3Q9BRN9 247 aa6.5□□□□□ -1.37
HLA-DOA-201ENST00000229829 M0R2N4 97 aa6.5□□□□□ -1.37
HLA-DOA-201ENST00000229829 Q8N3U1 123 aa6.5□□□□□ -1.37
HLA-DOA-201ENST00000229829 Q8N9L7 120 aa6.5□□□□□ -1.37
HLA-DOA-201ENST00000229829 C6orf99Q4VX62 202 aa6.49□□□□□ -1.37
HLA-DOA-201ENST00000229829 LINC00959A0A1B0GUT2 108 aa6.49□□□□□ -1.37
HLA-DOA-201ENST00000229829 PRR4Q16378 134 aa6.49□□□□□ -1.37
HLA-DOA-201ENST00000229829 TMEM256-PLSCR3K7ERE1 68 aa6.48□□□□□ -1.37
HLA-DOA-201ENST00000229829 MIFP14174 115 aa6.48□□□□□ -1.37
HLA-DOA-201ENST00000229829 TENM1Q9UKZ4 2725 aa6.47□□□□□ -1.37
HLA-DOA-201ENST00000229829 J3QL48 77 aa6.47□□□□□ -1.37
HLA-DOA-201ENST00000229829 GYPEP15421 78 aa6.47□□□□□ -1.37
HLA-DOA-201ENST00000229829 LINC01547P58512 204 aaPredicted RBP6.47□□□□□ -1.37
HLA-DOA-201ENST00000229829 HELZ2Q9BYK8 2649 aaKnown RBP6.47□□□□□ -1.37
HLA-DOA-201ENST00000229829 IGLV10-54A0A075B6I4 117 aa6.47□□□□□ -1.37
HLA-DOA-201ENST00000229829 IBA57-AS1B1ANH7 110 aa6.47□□□□□ -1.37
HLA-DOA-201ENST00000229829 ATP5EP2Q5VTU8 51 aa6.47□□□□□ -1.37
HLA-DOA-201ENST00000229829 FAM229BQ4G0N7 80 aa6.46□□□□□ -1.38
HLA-DOA-201ENST00000229829 CMC4P56277 68 aaPredicted RBP6.46□□□□□ -1.38
HLA-DOA-201ENST00000229829 Q8N814 137 aa6.46□□□□□ -1.38
HLA-DOA-201ENST00000229829 TRRAPQ9Y4A5 3859 aa6.46□□□□□ -1.38
HLA-DOA-201ENST00000229829 CYSRT1A8MQ03 144 aa6.45□□□□□ -1.38
HLA-DOA-201ENST00000229829 VPREB1P12018 145 aa6.45□□□□□ -1.38
HLA-DOA-201ENST00000229829 C9orf116Q5BN46 136 aaPredicted RBP6.45□□□□□ -1.38
HLA-DOA-201ENST00000229829 Q6ZVQ6 151 aa6.45□□□□□ -1.38
HLA-DOA-201ENST00000229829 RETNQ9HD89 108 aa6.45□□□□□ -1.38
HLA-DOA-201ENST00000229829 UNC79Q9P2D8 2635 aa6.45□□□□□ -1.38
HLA-DOA-201ENST00000229829 PSPHP1O15172 72 aa6.45□□□□□ -1.38
HLA-DOA-201ENST00000229829 DEFB4AO15263 64 aa6.45□□□□□ -1.38
HLA-DOA-201ENST00000229829 NANOS2P60321 138 aaKnown RBP6.45□□□□□ -1.38
HLA-DOA-201ENST00000229829 SPATA3Q8NHX4 192 aa6.45□□□□□ -1.38
HLA-DOA-201ENST00000229829 C16orf95Q9H693 158 aa6.44□□□□□ -1.38
HLA-DOA-201ENST00000229829 KRTAP10-3P60369 221 aa6.44□□□□□ -1.38
HLA-DOA-201ENST00000229829 NREPQ16612 68 aa6.44□□□□□ -1.38
HLA-DOA-201ENST00000229829 Q6ZQY7 126 aa6.44□□□□□ -1.38
HLA-DOA-201ENST00000229829 FUSP35637 526 aaKnown RBP eCLIP6.43□□□□□ -1.38
HLA-DOA-201ENST00000229829 CELA1Q9UNI1 258 aa6.43□□□□□ -1.38
HLA-DOA-201ENST00000229829 IGHV4-28A0A0C4DH34 117 aa6.43□□□□□ -1.38
HLA-DOA-201ENST00000229829 TMEM254Q8TBM7 123 aa6.43□□□□□ -1.38
HLA-DOA-201ENST00000229829 SMR3AQ99954 134 aa6.43□□□□□ -1.38
HLA-DOA-201ENST00000229829 X6R8D5 127 aa6.43□□□□□ -1.38
HLA-DOA-201ENST00000229829 OTOGQ6ZRI0 2925 aa6.42□□□□□ -1.38
HLA-DOA-201ENST00000229829 LINC00269Q8N2A0 174 aa6.42□□□□□ -1.38
HLA-DOA-201ENST00000229829 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.42□□□□□ -1.38
HLA-DOA-201ENST00000229829 KLKP1Q107X0 134 aa6.41□□□□□ -1.38
HLA-DOA-201ENST00000229829 LINC00612Q8N6U2 182 aa6.41□□□□□ -1.38
HLA-DOA-201ENST00000229829 OBSCN-AS1Q96MR7 158 aa6.41□□□□□ -1.38
HLA-DOA-201ENST00000229829 A0A1B0GUV1 79 aa6.41□□□□□ -1.38
HLA-DOA-201ENST00000229829 BPY2O14599 106 aa6.41□□□□□ -1.38
HLA-DOA-201ENST00000229829 Q8NDZ9 215 aa6.41□□□□□ -1.38
HLA-DOA-201ENST00000229829 DNAH7Q8WXX0 4024 aa6.41□□□□□ -1.38
HLA-DOA-201ENST00000229829 LY6G6DO95868 133 aa6.4□□□□□ -1.38
HLA-DOA-201ENST00000229829 Q8IZM0 81 aa6.4□□□□□ -1.38
HLA-DOA-201ENST00000229829 PRO0255Q9UI72 69 aa6.4□□□□□ -1.38
HLA-DOA-201ENST00000229829 KIAA0087Q14695 138 aa6.4□□□□□ -1.39
HLA-DOA-201ENST00000229829 HIGD2AQ9BW72 106 aa6.4□□□□□ -1.39
HLA-DOA-201ENST00000229829 HECTD1Q9ULT8 2610 aa6.4□□□□□ -1.39
HLA-DOA-201ENST00000229829 ATRQ13535 2644 aa6.4□□□□□ -1.39
HLA-DOA-201ENST00000229829 HIVEP1P15822 2718 aa6.39□□□□□ -1.39
HLA-DOA-201ENST00000229829 PMAIP1Q13794 54 aa6.39□□□□□ -1.39
HLA-DOA-201ENST00000229829 C3orf84H3BNL1 204 aa6.39□□□□□ -1.39
HLA-DOA-201ENST00000229829 ESRGQ1W209 222 aa6.38□□□□□ -1.39
HLA-DOA-201ENST00000229829 DEFB135Q30KP9 77 aa6.38□□□□□ -1.39
HLA-DOA-201ENST00000229829 CHCHD10Q8WYQ3 142 aaPredicted RBP6.38□□□□□ -1.39
HLA-DOA-201ENST00000229829 PKD1L1Q8TDX9 2849 aa6.38□□□□□ -1.39
HLA-DOA-201ENST00000229829 ANGP03950 147 aaKnown RBP6.38□□□□□ -1.39
HLA-DOA-201ENST00000229829 Q6ZQT0 140 aa6.38□□□□□ -1.39
HLA-DOA-201ENST00000229829 C6orf223Q8N319 242 aa6.37□□□□□ -1.39
HLA-DOA-201ENST00000229829 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
HLA-DOA-201ENST00000229829 PRYO14603 147 aa6.37□□□□□ -1.39
HLA-DOA-201ENST00000229829 SPTSSBQ8NFR3 76 aa6.37□□□□□ -1.39
HLA-DOA-201ENST00000229829 TNP2Q05952 138 aa6.37□□□□□ -1.39
HLA-DOA-201ENST00000229829 REG3AQ06141 175 aa6.37□□□□□ -1.39
HLA-DOA-201ENST00000229829 C10orf25Q5T742 122 aa6.37□□□□□ -1.39
HLA-DOA-201ENST00000229829 CD164L2Q6UWJ8 174 aa6.37□□□□□ -1.39
HLA-DOA-201ENST00000229829 TRBV10-3A0A0K0K1G6 114 aa6.36□□□□□ -1.39
HLA-DOA-201ENST00000229829 NDUFC1O43677 76 aa6.36□□□□□ -1.39
HLA-DOA-201ENST00000229829 TEP1Q99973 2627 aaKnown RBP6.36□□□□□ -1.39
HLA-DOA-201ENST00000229829 DEFB105AQ8NG35 78 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms