RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 LINC01006Q8NI28 216 aa9.7□□□□□ -0.86
SF1-201ENST00000227503 TRGV4A0A0C4DH28 118 aa9.69□□□□□ -0.86
SF1-201ENST00000227503 TM2D3Q9BRN9 247 aa9.69□□□□□ -0.86
SF1-201ENST00000227503 LINC00959A0A1B0GUT2 108 aa9.69□□□□□ -0.86
SF1-201ENST00000227503 IGLV1-51P01701 117 aa9.69□□□□□ -0.86
SF1-201ENST00000227503 RBM3P98179 157 aaKnown RBP9.69□□□□□ -0.86
SF1-201ENST00000227503 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
SF1-201ENST00000227503 LINC00167Q96N53 147 aa9.68□□□□□ -0.86
SF1-201ENST00000227503 UNC79Q9P2D8 2635 aa9.68□□□□□ -0.86
SF1-201ENST00000227503 Q6ZVQ6 151 aa9.68□□□□□ -0.86
SF1-201ENST00000227503 TRBV6-8A0A0A6YYG3 113 aa9.67□□□□□ -0.86
SF1-201ENST00000227503 Q6ZQT0 140 aa9.67□□□□□ -0.86
SF1-201ENST00000227503 IGLV10-54A0A075B6I4 117 aa9.67□□□□□ -0.86
SF1-201ENST00000227503 EPM2AB3EWF7 344 aa9.67□□□□□ -0.86
SF1-201ENST00000227503 BRK1Q8WUW1 75 aa9.66□□□□□ -0.86
SF1-201ENST00000227503 KRTAP1-1Q07627 177 aa9.66□□□□□ -0.86
SF1-201ENST00000227503 Q8N3U1 123 aa9.65□□□□□ -0.86
SF1-201ENST00000227503 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.86
SF1-201ENST00000227503 PDZD2O15018 2839 aa9.65□□□□□ -0.86
SF1-201ENST00000227503 FAM229BQ4G0N7 80 aa9.65□□□□□ -0.86
SF1-201ENST00000227503 TRBV7-6A0A0J9YX20 115 aa9.64□□□□□ -0.87
SF1-201ENST00000227503 LINC00269Q8N2A0 174 aa9.64□□□□□ -0.87
SF1-201ENST00000227503 LINC00482Q8N8I6 264 aa9.64□□□□□ -0.87
SF1-201ENST00000227503 Q8N9L7 120 aa9.64□□□□□ -0.87
SF1-201ENST00000227503 KLKP1Q107X0 134 aa9.63□□□□□ -0.87
SF1-201ENST00000227503 DEFB130BP0DP73 79 aa9.62□□□□□ -0.87
SF1-201ENST00000227503 DEFB130AP0DP74 79 aa9.62□□□□□ -0.87
SF1-201ENST00000227503 TRBV10-3A0A0K0K1G6 114 aa9.62□□□□□ -0.87
SF1-201ENST00000227503 Q6ZQY7 126 aa9.61□□□□□ -0.87
SF1-201ENST00000227503 SMIM26A0A096LP01 95 aa9.61□□□□□ -0.87
SF1-201ENST00000227503 LINC00575Q6W349 94 aa9.61□□□□□ -0.87
SF1-201ENST00000227503 C6orf223Q8N319 242 aa9.59□□□□□ -0.87
SF1-201ENST00000227503 OTOGQ6ZRI0 2925 aa9.58□□□□□ -0.88
SF1-201ENST00000227503 Q8IZM0 81 aa9.58□□□□□ -0.88
SF1-201ENST00000227503 ZNF561-AS1K7EIQ3 104 aa9.57□□□□□ -0.88
SF1-201ENST00000227503 C10orf25Q5T742 122 aa9.57□□□□□ -0.88
SF1-201ENST00000227503 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.57□□□□□ -0.88
SF1-201ENST00000227503 LINC00612Q8N6U2 182 aa9.57□□□□□ -0.88
SF1-201ENST00000227503 HIVEP2P31629 2446 aa9.56□□□□□ -0.88
SF1-201ENST00000227503 MIFP14174 115 aa9.56□□□□□ -0.88
SF1-201ENST00000227503 GYPEP15421 78 aa9.56□□□□□ -0.88
SF1-201ENST00000227503 DAD1P61803 113 aa9.56□□□□□ -0.88
SF1-201ENST00000227503 KIAA0087Q14695 138 aa9.56□□□□□ -0.88
SF1-201ENST00000227503 TRBV7-4A0A0J9YYF1 115 aa9.55□□□□□ -0.88
SF1-201ENST00000227503 KMT2BQ9UMN6 2715 aaPredicted RBP9.55□□□□□ -0.88
SF1-201ENST00000227503 NREPQ16612 68 aa9.55□□□□□ -0.88
SF1-201ENST00000227503 LOC110117498A0A087WWA1 95 aa9.54□□□□□ -0.88
SF1-201ENST00000227503 MUC7Q8TAX7 377 aa9.54□□□□□ -0.88
SF1-201ENST00000227503 KRTAP10-3P60369 221 aa9.53□□□□□ -0.88
SF1-201ENST00000227503 UNQ6190/PRO20217Q6UXQ8 127 aa9.53□□□□□ -0.88
SF1-201ENST00000227503 LRCOL1A6NCL2 159 aa9.53□□□□□ -0.88
SF1-201ENST00000227503 VWFP04275 2813 aa9.53□□□□□ -0.88
SF1-201ENST00000227503 TMEM254Q8TBM7 123 aa9.53□□□□□ -0.88
SF1-201ENST00000227503 A0A1B0GUV1 79 aa9.52□□□□□ -0.89
SF1-201ENST00000227503 BPY2O14599 106 aa9.52□□□□□ -0.89
SF1-201ENST00000227503 X6R8D5 127 aa9.52□□□□□ -0.89
SF1-201ENST00000227503 FLNBO75369 2602 aaKnown RBP9.51□□□□□ -0.89
SF1-201ENST00000227503 CHCHD10Q8WYQ3 142 aaPredicted RBP9.51□□□□□ -0.89
SF1-201ENST00000227503 XAGE1AQ9HD64 81 aa9.51□□□□□ -0.89
SF1-201ENST00000227503 ANGP03950 147 aaKnown RBP9.5□□□□□ -0.89
SF1-201ENST00000227503 CXCL6P80162 114 aa9.49□□□□□ -0.89
SF1-201ENST00000227503 C1orf195Q5TG92 126 aa9.49□□□□□ -0.89
SF1-201ENST00000227503 SMR3AQ99954 134 aa9.49□□□□□ -0.89
SF1-201ENST00000227503 PRO0255Q9UI72 69 aa9.49□□□□□ -0.89
SF1-201ENST00000227503 HIGD2AQ9BW72 106 aa9.47□□□□□ -0.89
SF1-201ENST00000227503 DEFB4AO15263 64 aa9.47□□□□□ -0.89
SF1-201ENST00000227503 TENM1Q9UKZ4 2725 aa9.47□□□□□ -0.89
SF1-201ENST00000227503 BCE1O60756 84 aa9.46□□□□□ -0.89
SF1-201ENST00000227503 C3orf84H3BNL1 204 aa9.45□□□□□ -0.9
SF1-201ENST00000227503 REG3AQ06141 175 aa9.45□□□□□ -0.9
SF1-201ENST00000227503 CD164L2Q6UWJ8 174 aa9.45□□□□□ -0.9
SF1-201ENST00000227503 CELA1Q9UNI1 258 aa9.45□□□□□ -0.9
SF1-201ENST00000227503 COX17Q14061 63 aa9.44□□□□□ -0.9
SF1-201ENST00000227503 C9orf66Q5T8R8 295 aa9.44□□□□□ -0.9
SF1-201ENST00000227503 PRB2P02812 416 aaPredicted RBP9.44□□□□□ -0.9
SF1-201ENST00000227503 SPAG11BQ08648 103 aa9.44□□□□□ -0.9
SF1-201ENST00000227503 CYSRT1A8MQ03 144 aa9.43□□□□□ -0.9
SF1-201ENST00000227503 IGLV6-57P01721 117 aa9.43□□□□□ -0.9
SF1-201ENST00000227503 LYRM9A8MSI8 78 aa9.43□□□□□ -0.9
SF1-201ENST00000227503 PRYO14603 147 aa9.43□□□□□ -0.9
SF1-201ENST00000227503 NDUFC1O43677 76 aa9.43□□□□□ -0.9
SF1-201ENST00000227503 KLK12Q9UKR0 248 aa9.42□□□□□ -0.9
SF1-201ENST00000227503 ATRQ13535 2644 aa9.42□□□□□ -0.9
SF1-201ENST00000227503 F8WDY8 70 aa9.42□□□□□ -0.9
SF1-201ENST00000227503 FUSP35637 526 aaKnown RBP eCLIP9.42□□□□□ -0.95e-13■□□□□ 10.2
SF1-201ENST00000227503 V9GYY9 64 aa9.42□□□□□ -0.9
SF1-201ENST00000227503 IGKV4-1P06312 121 aa9.42□□□□□ -0.9
SF1-201ENST00000227503 HIVEP1P15822 2718 aa9.41□□□□□ -0.9
SF1-201ENST00000227503 IGHV4-28A0A0C4DH34 117 aa9.41□□□□□ -0.9
SF1-201ENST00000227503 SEC61GP60059 68 aa9.41□□□□□ -0.9
SF1-201ENST00000227503 DIRC1Q969H9 104 aa9.41□□□□□ -0.9
SF1-201ENST00000227503 FAM30AQ9NZY2 134 aa9.41□□□□□ -0.9
SF1-201ENST00000227503 ESRGQ1W209 222 aa9.4□□□□□ -0.91
SF1-201ENST00000227503 F8P00451 2351 aa9.4□□□□□ -0.91
SF1-201ENST00000227503 TEP1Q99973 2627 aaKnown RBP9.4□□□□□ -0.91
SF1-201ENST00000227503 TRRAPQ9Y4A5 3859 aa9.4□□□□□ -0.91
SF1-201ENST00000227503 ZNF73O43830 326 aaPredicted RBP9.39□□□□□ -0.91
SF1-201ENST00000227503 DEFB135Q30KP9 77 aa9.39□□□□□ -0.91
SF1-201ENST00000227503 OCR1Q9BZK8 76 aa9.39□□□□□ -0.91
SF1-201ENST00000227503 Q6ZTC4 211 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms