RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 C20orf197Q8N268 126 aa11.75□□□□□ -0.53
H2AFV-201ENST00000222690 CYSRT1A8MQ03 144 aa11.74□□□□□ -0.53
H2AFV-201ENST00000222690 SPATA3Q8NHX4 192 aa11.74□□□□□ -0.53
H2AFV-201ENST00000222690 COX17Q14061 63 aa11.73□□□□□ -0.53
H2AFV-201ENST00000222690 C16orf95Q9H693 158 aa11.73□□□□□ -0.53
H2AFV-201ENST00000222690 IGHV4-28A0A0C4DH34 117 aa11.73□□□□□ -0.53
H2AFV-201ENST00000222690 NDUFC2O95298 119 aa11.73□□□□□ -0.53
H2AFV-201ENST00000222690 LINC00575Q6W349 94 aa11.72□□□□□ -0.53
H2AFV-201ENST00000222690 CELA1Q9UNI1 258 aa11.71□□□□□ -0.53
H2AFV-201ENST00000222690 M0R2N4 97 aa11.71□□□□□ -0.53
H2AFV-201ENST00000222690 SCXQ7RTU7 201 aa11.71□□□□□ -0.54
H2AFV-201ENST00000222690 TENM4Q6N022 2769 aa11.69□□□□□ -0.54
H2AFV-201ENST00000222690 KRTAP10-3P60369 221 aa11.69□□□□□ -0.54
H2AFV-201ENST00000222690 HIGD2BQ4VC39 106 aa11.69□□□□□ -0.54
H2AFV-201ENST00000222690 LYRM9A8MSI8 78 aa11.69□□□□□ -0.54
H2AFV-201ENST00000222690 TEP1Q99973 2627 aaKnown RBP11.69□□□□□ -0.54
H2AFV-201ENST00000222690 TMEM258P61165 79 aa11.68□□□□□ -0.54
H2AFV-201ENST00000222690 KRTAP1-1Q07627 177 aa11.68□□□□□ -0.54
H2AFV-201ENST00000222690 LINC00612Q8N6U2 182 aa11.68□□□□□ -0.54
H2AFV-201ENST00000222690 SMIM9A6NGZ8 99 aa11.68□□□□□ -0.54
H2AFV-201ENST00000222690 TRBV10-3A0A0K0K1G6 114 aa11.68□□□□□ -0.54
H2AFV-201ENST00000222690 LINC00167Q96N53 147 aa11.67□□□□□ -0.54
H2AFV-201ENST00000222690 ZNF561-AS1K7EIQ3 104 aa11.66□□□□□ -0.54
H2AFV-201ENST00000222690 ATP5EP2Q5VTU8 51 aa11.66□□□□□ -0.54
H2AFV-201ENST00000222690 DPH3Q96FX2 82 aa11.66□□□□□ -0.54
H2AFV-201ENST00000222690 Q6ZQT0 140 aa11.65□□□□□ -0.54
H2AFV-201ENST00000222690 TENM1Q9UKZ4 2725 aa11.64□□□□□ -0.55
H2AFV-201ENST00000222690 DIRC1Q969H9 104 aa11.64□□□□□ -0.55
H2AFV-201ENST00000222690 APOC4P55056 127 aa11.63□□□□□ -0.55
H2AFV-201ENST00000222690 Q6ZVQ6 151 aa11.62□□□□□ -0.55
H2AFV-201ENST00000222690 SPART-AS1P0CW21 52 aa11.62□□□□□ -0.55
H2AFV-201ENST00000222690 LINC01547P58512 204 aaPredicted RBP11.62□□□□□ -0.55
H2AFV-201ENST00000222690 SNURFQ9Y675 71 aa11.62□□□□□ -0.55
H2AFV-201ENST00000222690 CAMK2N2Q96S95 79 aa11.61□□□□□ -0.55
H2AFV-201ENST00000222690 C9orf66Q5T8R8 295 aa11.6□□□□□ -0.55
H2AFV-201ENST00000222690 LELP1Q5T871 98 aa11.6□□□□□ -0.55
H2AFV-201ENST00000222690 C6orf48Q9UBA6 75 aa11.6□□□□□ -0.55
H2AFV-201ENST00000222690 PDZD2O15018 2839 aa11.6□□□□□ -0.55
H2AFV-201ENST00000222690 ZNF73O43830 326 aaPredicted RBP11.59□□□□□ -0.55
H2AFV-201ENST00000222690 TRAV10A0A0B4J240 114 aa11.58□□□□□ -0.56
H2AFV-201ENST00000222690 COX7BP24311 80 aa11.58□□□□□ -0.56
H2AFV-201ENST00000222690 F8P00451 2351 aa11.58□□□□□ -0.56
H2AFV-201ENST00000222690 IGLV6-57P01721 117 aa11.57□□□□□ -0.56
H2AFV-201ENST00000222690 OXTP01178 125 aa11.56□□□□□ -0.56
H2AFV-201ENST00000222690 HIVEP1P15822 2718 aa11.56□□□□□ -0.56
H2AFV-201ENST00000222690 MUC7Q8TAX7 377 aa11.56□□□□□ -0.56
H2AFV-201ENST00000222690 RPS28P62857 69 aaKnown RBP11.56□□□□□ -0.56
H2AFV-201ENST00000222690 A0A0J9YWU9 116 aa11.55□□□□□ -0.56
H2AFV-201ENST00000222690 IGHV4-30-4P0DP06 118 aa11.55□□□□□ -0.56
H2AFV-201ENST00000222690 DEFB105AQ8NG35 78 aa11.55□□□□□ -0.56
H2AFV-201ENST00000222690 Q8NAQ8 132 aa11.54□□□□□ -0.56
H2AFV-201ENST00000222690 C4orf26Q17RF5 130 aa11.54□□□□□ -0.56
H2AFV-201ENST00000222690 WFDC10BQ8IUB3 73 aa11.54□□□□□ -0.56
H2AFV-201ENST00000222690 MIFP14174 115 aa11.53□□□□□ -0.56
H2AFV-201ENST00000222690 HRCT1Q6UXD1 115 aa11.53□□□□□ -0.56
H2AFV-201ENST00000222690 LOC110117498A0A087WWA1 95 aa11.53□□□□□ -0.56
H2AFV-201ENST00000222690 FAM236DA0A1B0GTK5 79 aa11.53□□□□□ -0.56
H2AFV-201ENST00000222690 FAM236CP0DP71 79 aa11.53□□□□□ -0.56
H2AFV-201ENST00000222690 Q8N9L7 120 aa11.53□□□□□ -0.56
H2AFV-201ENST00000222690 PKD1L1Q8TDX9 2849 aa11.52□□□□□ -0.56
H2AFV-201ENST00000222690 RMI2Q96E14 147 aa11.52□□□□□ -0.56
H2AFV-201ENST00000222690 C5orf47Q569G3 176 aa11.52□□□□□ -0.57
H2AFV-201ENST00000222690 LYPD5Q6UWN5 251 aa11.52□□□□□ -0.57
H2AFV-201ENST00000222690 INAFM1C9JVW0 142 aa11.51□□□□□ -0.57
H2AFV-201ENST00000222690 ANK3Q12955 4377 aaKnown RBP11.51□□□□□ -0.57
H2AFV-201ENST00000222690 TRRAPQ9Y4A5 3859 aa11.5□□□□□ -0.57
H2AFV-201ENST00000222690 TRAV7A0A075B6U4 112 aa11.5□□□□□ -0.57
H2AFV-201ENST00000222690 RETNQ9HD89 108 aa11.5□□□□□ -0.57
H2AFV-201ENST00000222690 PDE6GP18545 87 aa11.49□□□□□ -0.57
H2AFV-201ENST00000222690 Q6ZRU5 148 aa11.49□□□□□ -0.57
H2AFV-201ENST00000222690 OTOGQ6ZRI0 2925 aa11.49□□□□□ -0.57
H2AFV-201ENST00000222690 PRR34Q9NV39 138 aa11.49□□□□□ -0.57
H2AFV-201ENST00000222690 IGKV2D-24A0A075B6R9 120 aa11.48□□□□□ -0.57
H2AFV-201ENST00000222690 C3orf84H3BNL1 204 aa11.48□□□□□ -0.57
H2AFV-201ENST00000222690 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.48□□□□□ -0.57
H2AFV-201ENST00000222690 TM2D3Q9BRN9 247 aa11.47□□□□□ -0.57
H2AFV-201ENST00000222690 F8WEM9 126 aa11.46□□□□□ -0.57
H2AFV-201ENST00000222690 KPRPQ5T749 579 aaPredicted RBP11.46□□□□□ -0.57
H2AFV-201ENST00000222690 NSD1Q96L73 2696 aaPredicted RBP11.46□□□□□ -0.57
H2AFV-201ENST00000222690 ELOF1P60002 83 aaKnown RBP11.45□□□□□ -0.58
H2AFV-201ENST00000222690 C1orf43Q9BWL3 253 aa11.44□□□□□ -0.58
H2AFV-201ENST00000222690 VPREB1P12018 145 aa11.44□□□□□ -0.58
H2AFV-201ENST00000222690 H7BZZ5 65 aa11.43□□□□□ -0.58
H2AFV-201ENST00000222690 M0R378 163 aa11.43□□□□□ -0.58
H2AFV-201ENST00000222690 NREPQ16612 68 aa11.43□□□□□ -0.58
H2AFV-201ENST00000222690 NKAPP1Q8N9T2 125 aa11.42□□□□□ -0.58
H2AFV-201ENST00000222690 CXCL6P80162 114 aa11.42□□□□□ -0.58
H2AFV-201ENST00000222690 Q6ZTC4 211 aa11.42□□□□□ -0.58
H2AFV-201ENST00000222690 GVQW2A0A096LPI5 108 aaPredicted RBP11.42□□□□□ -0.58
H2AFV-201ENST00000222690 TRBV7-4A0A0J9YYF1 115 aa11.41□□□□□ -0.58
H2AFV-201ENST00000222690 NDUFC2-KCTD14E9PQ53 114 aa11.41□□□□□ -0.58
H2AFV-201ENST00000222690 EGFEM1PQ0D2K5 195 aa11.4□□□□□ -0.58
H2AFV-201ENST00000222690 NOTCH1P46531 2555 aa11.4□□□□□ -0.58
H2AFV-201ENST00000222690 H3BQ85 93 aa11.4□□□□□ -0.59
H2AFV-201ENST00000222690 J3QKU1 62 aa11.4□□□□□ -0.59
H2AFV-201ENST00000222690 OXLD1Q5BKU9 147 aa11.39□□□□□ -0.59
H2AFV-201ENST00000222690 BAHCC1Q9P281 2608 aa11.39□□□□□ -0.59
H2AFV-201ENST00000222690 BPY2O14599 106 aa11.39□□□□□ -0.59
H2AFV-201ENST00000222690 Q6ZRP5 223 aa11.39□□□□□ -0.59
H2AFV-201ENST00000222690 RPL37AP8A6NKH3 93 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms