RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 A0A096LNT2 108 aa10.19□□□□□ -0.78
PTPRA-201ENST00000216877 STHQ8IWL8 128 aa10.19□□□□□ -0.78
PTPRA-201ENST00000216877 LINC00269Q8N2A0 174 aa10.19□□□□□ -0.78
PTPRA-201ENST00000216877 FAM30AQ9NZY2 134 aa10.19□□□□□ -0.78
PTPRA-201ENST00000216877 C11orf71Q6IPW1 123 aa10.18□□□□□ -0.78
PTPRA-201ENST00000216877 PLAC8L1A1L4L8 177 aa10.18□□□□□ -0.78
PTPRA-201ENST00000216877 SPATA3Q8NHX4 192 aa10.17□□□□□ -0.78
PTPRA-201ENST00000216877 TRBV7-4A0A0J9YYF1 115 aa10.17□□□□□ -0.78
PTPRA-201ENST00000216877 FAM19A3Q7Z5A8 133 aa10.17□□□□□ -0.78
PTPRA-201ENST00000216877 IGHV3OR16-9A0A0B4J2B5 98 aa10.17□□□□□ -0.78
PTPRA-201ENST00000216877 F8P00451 2351 aa10.17□□□□□ -0.78
PTPRA-201ENST00000216877 ATRQ13535 2644 aa10.16□□□□□ -0.78
PTPRA-201ENST00000216877 C3orf84H3BNL1 204 aa10.16□□□□□ -0.78
PTPRA-201ENST00000216877 BCE1O60756 84 aa10.16□□□□□ -0.78
PTPRA-201ENST00000216877 IGLV1-40P01703 118 aa10.16□□□□□ -0.78
PTPRA-201ENST00000216877 LINC01006Q8NI28 216 aa10.16□□□□□ -0.78
PTPRA-201ENST00000216877 MUC7Q8TAX7 377 aa10.15□□□□□ -0.78
PTPRA-201ENST00000216877 DSCR9P59020 149 aa10.15□□□□□ -0.79
PTPRA-201ENST00000216877 LINC00575Q6W349 94 aa10.15□□□□□ -0.79
PTPRA-201ENST00000216877 PLA2G2AP14555 144 aa10.14□□□□□ -0.79
PTPRA-201ENST00000216877 FBN2P35556 2912 aa10.14□□□□□ -0.79
PTPRA-201ENST00000216877 DEFB130BP0DP73 79 aa10.14□□□□□ -0.79
PTPRA-201ENST00000216877 DEFB130AP0DP74 79 aa10.14□□□□□ -0.79
PTPRA-201ENST00000216877 DEFB113Q30KQ7 82 aa10.14□□□□□ -0.79
PTPRA-201ENST00000216877 C18orf65Q6ZTR6 163 aa10.14□□□□□ -0.79
PTPRA-201ENST00000216877 A6NDX4 124 aa10.13□□□□□ -0.79
PTPRA-201ENST00000216877 CXCL6P80162 114 aa10.13□□□□□ -0.79
PTPRA-201ENST00000216877 TMEM89A2RUT3 159 aa10.12□□□□□ -0.79
PTPRA-201ENST00000216877 LINC00959A0A1B0GUT2 108 aa10.12□□□□□ -0.79
PTPRA-201ENST00000216877 MAP6D1Q9H9H5 199 aa10.12□□□□□ -0.79
PTPRA-201ENST00000216877 NBEAL2Q6ZNJ1 2754 aa10.1□□□□□ -0.79
PTPRA-201ENST00000216877 DEFB105AQ8NG35 78 aa10.1□□□□□ -0.79
PTPRA-201ENST00000216877 UTP20O75691 2785 aaKnown RBP10.1□□□□□ -0.79
PTPRA-201ENST00000216877 LY6G6DO95868 133 aa10.1□□□□□ -0.79
PTPRA-201ENST00000216877 CD164L2Q6UWJ8 174 aa10.09□□□□□ -0.79
PTPRA-201ENST00000216877 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
PTPRA-201ENST00000216877 TRBV6-8A0A0A6YYG3 113 aa10.08□□□□□ -0.8
PTPRA-201ENST00000216877 A8MUN3 132 aa10.08□□□□□ -0.8
PTPRA-201ENST00000216877 PDE6GP18545 87 aa10.08□□□□□ -0.8
PTPRA-201ENST00000216877 C6orf223Q8N319 242 aa10.07□□□□□ -0.8
PTPRA-201ENST00000216877 LOC110117498A0A087WWA1 95 aa10.07□□□□□ -0.8
PTPRA-201ENST00000216877 C1orf64Q8NEQ6 169 aa10.06□□□□□ -0.8
PTPRA-201ENST00000216877 LINC00167Q96N53 147 aa10.06□□□□□ -0.8
PTPRA-201ENST00000216877 KLK12Q9UKR0 248 aa10.06□□□□□ -0.8
PTPRA-201ENST00000216877 GCN1Q92616 2671 aaKnown RBP10.06□□□□□ -0.8
PTPRA-201ENST00000216877 PRR15Q8IV56 129 aa10.06□□□□□ -0.8
PTPRA-201ENST00000216877 C1orf158Q8N1D5 194 aa10.06□□□□□ -0.8
PTPRA-201ENST00000216877 ZANQ9Y493 2812 aa10.06□□□□□ -0.8
PTPRA-201ENST00000216877 A8MU10 97 aa10.06□□□□□ -0.8
PTPRA-201ENST00000216877 CHKB-CPT1BH3BT56 60 aa10.05□□□□□ -0.8
PTPRA-201ENST00000216877 UBR5O95071 2799 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-201ENST00000216877 ANGP03950 147 aaKnown RBP10.04□□□□□ -0.8
PTPRA-201ENST00000216877 CD164Q04900 197 aa10.04□□□□□ -0.8
PTPRA-201ENST00000216877 DIRC1Q969H9 104 aa10.04□□□□□ -0.8
PTPRA-201ENST00000216877 SMR3AQ99954 134 aa10.04□□□□□ -0.8
PTPRA-201ENST00000216877 HIGD2BQ4VC39 106 aa10.04□□□□□ -0.8
PTPRA-201ENST00000216877 Q6ZRP5 223 aa10.04□□□□□ -0.8
PTPRA-201ENST00000216877 Q6ZTC4 211 aa10.04□□□□□ -0.8
PTPRA-201ENST00000216877 ESM1Q9NQ30 184 aa10.04□□□□□ -0.8
PTPRA-201ENST00000216877 SMIM29Q86T20 159 aa10.03□□□□□ -0.8
PTPRA-201ENST00000216877 TRAV22A0A0B4J277 110 aa10.03□□□□□ -0.8
PTPRA-201ENST00000216877 MGAM2Q2M2H8 2515 aa10.03□□□□□ -0.8
PTPRA-201ENST00000216877 C10orf25Q5T742 122 aa10.03□□□□□ -0.8
PTPRA-201ENST00000216877 MAST4O15021 2626 aa10.02□□□□□ -0.81
PTPRA-201ENST00000216877 UNQ6190/PRO20217Q6UXQ8 127 aa10.02□□□□□ -0.81
PTPRA-201ENST00000216877 TEX15Q9BXT5 2789 aa10.02□□□□□ -0.81
PTPRA-201ENST00000216877 Q8IZM0 81 aa10.02□□□□□ -0.81
PTPRA-201ENST00000216877 Q8NDZ9 215 aa10.02□□□□□ -0.81
PTPRA-201ENST00000216877 ANK3Q12955 4377 aaKnown RBP10.01□□□□□ -0.81
PTPRA-201ENST00000216877 GYPEP15421 78 aa10.01□□□□□ -0.81
PTPRA-201ENST00000216877 HTN3P15516 51 aa10□□□□□ -0.81
PTPRA-201ENST00000216877 hDV103S1A0JD37 113 aa10□□□□□ -0.81
PTPRA-201ENST00000216877 COX7BP24311 80 aa9.99□□□□□ -0.81
PTPRA-201ENST00000216877 WFDC10AQ9H1F0 79 aa9.99□□□□□ -0.81
PTPRA-201ENST00000216877 IGHV4-31P0DP07 118 aa9.98□□□□□ -0.81
PTPRA-201ENST00000216877 Q6ZRU5 148 aa9.98□□□□□ -0.81
PTPRA-201ENST00000216877 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-201ENST00000216877 OCR1Q9BZK8 76 aa9.98□□□□□ -0.81
PTPRA-201ENST00000216877 ITPR2Q14571 2701 aa9.98□□□□□ -0.81
PTPRA-201ENST00000216877 IGKV4-1P06312 121 aa9.97□□□□□ -0.81
PTPRA-201ENST00000216877 SPAG11BQ08648 103 aa9.96□□□□□ -0.81
PTPRA-201ENST00000216877 DEFB116Q30KQ4 102 aa9.96□□□□□ -0.81
PTPRA-201ENST00000216877 ODF3L2Q3SX64 289 aa9.96□□□□□ -0.81
PTPRA-201ENST00000216877 DEFB114Q30KQ6 69 aa9.95□□□□□ -0.82
PTPRA-201ENST00000216877 TENM4Q6N022 2769 aa9.94□□□□□ -0.82
PTPRA-201ENST00000216877 ZNF73O43830 326 aaPredicted RBP9.94□□□□□ -0.82
PTPRA-201ENST00000216877 PRR15LQ9BU68 103 aa9.94□□□□□ -0.82
PTPRA-201ENST00000216877 RBM12B-AS1Q9P1G2 102 aa9.94□□□□□ -0.82
PTPRA-201ENST00000216877 ERC2-IT1O76042 136 aa9.93□□□□□ -0.82
PTPRA-201ENST00000216877 APCP25054 2843 aa9.93□□□□□ -0.82
PTPRA-201ENST00000216877 A6NED7 52 aa9.93□□□□□ -0.82
PTPRA-201ENST00000216877 UNC79Q9P2D8 2635 aa9.92□□□□□ -0.82
PTPRA-201ENST00000216877 C9orf66Q5T8R8 295 aa9.92□□□□□ -0.82
PTPRA-201ENST00000216877 UBE2BP63146 152 aa9.91□□□□□ -0.82
PTPRA-201ENST00000216877 CMYA5Q8N3K9 4069 aa9.91□□□□□ -0.82
PTPRA-201ENST00000216877 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
PTPRA-201ENST00000216877 CYSRT1A8MQ03 144 aa9.91□□□□□ -0.82
PTPRA-201ENST00000216877 KMT2BQ9UMN6 2715 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-201ENST00000216877 DNAJC9-AS1A6NH13 148 aa9.9□□□□□ -0.82
PTPRA-201ENST00000216877 CCL24O00175 119 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms