RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 DIRC1Q969H9 104 aa11.82□□□□□ -0.52
PTPN18-201ENST00000175756 C22orf24Q9Y442 160 aa11.81□□□□□ -0.52
PTPN18-201ENST00000175756 LINC01561Q8N1V8 128 aa11.81□□□□□ -0.52
PTPN18-201ENST00000175756 CSNK1G2-AS1Q8NCQ2 148 aa11.8□□□□□ -0.52
PTPN18-201ENST00000175756 IGKV2D-24A0A075B6R9 120 aa11.79□□□□□ -0.52
PTPN18-201ENST00000175756 TRBV10-3A0A0K0K1G6 114 aa11.79□□□□□ -0.52
PTPN18-201ENST00000175756 A0A1B0GUV1 79 aa11.79□□□□□ -0.52
PTPN18-201ENST00000175756 COL6A5A8TX70 2615 aa11.78□□□□□ -0.52
PTPN18-201ENST00000175756 C19orf73Q9NVV2 129 aa11.78□□□□□ -0.52
PTPN18-201ENST00000175756 STAB1Q9NY15 2570 aa11.77□□□□□ -0.53
PTPN18-201ENST00000175756 LYRM9A8MSI8 78 aa11.76□□□□□ -0.53
PTPN18-201ENST00000175756 C9orf66Q5T8R8 295 aa11.76□□□□□ -0.53
PTPN18-201ENST00000175756 COX7BP24311 80 aa11.76□□□□□ -0.53
PTPN18-201ENST00000175756 CRYGAP11844 174 aa11.76□□□□□ -0.53
PTPN18-201ENST00000175756 TMEM258P61165 79 aa11.75□□□□□ -0.53
PTPN18-201ENST00000175756 CELA1Q9UNI1 258 aa11.75□□□□□ -0.53
PTPN18-201ENST00000175756 LINC00575Q6W349 94 aa11.75□□□□□ -0.53
PTPN18-201ENST00000175756 SMIM9A6NGZ8 99 aa11.74□□□□□ -0.53
PTPN18-201ENST00000175756 CYSTM1Q9H1C7 97 aa11.74□□□□□ -0.53
PTPN18-201ENST00000175756 X6R8D5 127 aa11.74□□□□□ -0.53
PTPN18-201ENST00000175756 COX17Q14061 63 aa11.74□□□□□ -0.53
PTPN18-201ENST00000175756 NKAPP1Q8N9T2 125 aa11.73□□□□□ -0.53
PTPN18-201ENST00000175756 HRCT1Q6UXD1 115 aa11.72□□□□□ -0.53
PTPN18-201ENST00000175756 C3orf84H3BNL1 204 aa11.72□□□□□ -0.53
PTPN18-201ENST00000175756 ATP5EP2Q5VTU8 51 aa11.72□□□□□ -0.53
PTPN18-201ENST00000175756 C1orf43Q9BWL3 253 aa11.71□□□□□ -0.54
PTPN18-201ENST00000175756 ZNF73O43830 326 aaPredicted RBP11.7□□□□□ -0.54
PTPN18-201ENST00000175756 NDUFC2O95298 119 aa11.7□□□□□ -0.54
PTPN18-201ENST00000175756 INAFM1C9JVW0 142 aa11.7□□□□□ -0.54
PTPN18-201ENST00000175756 C2orf48Q96LS8 159 aa11.7□□□□□ -0.54
PTPN18-201ENST00000175756 NREPQ16612 68 aa11.7□□□□□ -0.54
PTPN18-201ENST00000175756 FAM236DA0A1B0GTK5 79 aa11.69□□□□□ -0.54
PTPN18-201ENST00000175756 FAM236CP0DP71 79 aa11.69□□□□□ -0.54
PTPN18-201ENST00000175756 Q6ZVQ6 151 aa11.69□□□□□ -0.54
PTPN18-201ENST00000175756 Q8N9L7 120 aa11.69□□□□□ -0.54
PTPN18-201ENST00000175756 KIAA0087Q14695 138 aa11.68□□□□□ -0.54
PTPN18-201ENST00000175756 DPH3Q96FX2 82 aa11.68□□□□□ -0.54
PTPN18-201ENST00000175756 LINC01547P58512 204 aaPredicted RBP11.68□□□□□ -0.54
PTPN18-201ENST00000175756 M0R2N4 97 aa11.68□□□□□ -0.54
PTPN18-201ENST00000175756 NANOS2P60321 138 aaKnown RBP11.68□□□□□ -0.54
PTPN18-201ENST00000175756 LELP1Q5T871 98 aa11.68□□□□□ -0.54
PTPN18-201ENST00000175756 NBPF19A0A087WUL8 3843 aa11.67□□□□□ -0.54
PTPN18-201ENST00000175756 RETNQ9HD89 108 aa11.67□□□□□ -0.54
PTPN18-201ENST00000175756 LY6G6DO95868 133 aa11.66□□□□□ -0.54
PTPN18-201ENST00000175756 KRTAP1-3Q8IUG1 177 aa11.66□□□□□ -0.54
PTPN18-201ENST00000175756 PRB2P02812 416 aaPredicted RBP11.66□□□□□ -0.54
PTPN18-201ENST00000175756 SPATA3Q8NHX4 192 aa11.66□□□□□ -0.54
PTPN18-201ENST00000175756 RMI2Q96E14 147 aa11.65□□□□□ -0.54
PTPN18-201ENST00000175756 HIVEP1P15822 2718 aa11.65□□□□□ -0.54
PTPN18-201ENST00000175756 C16orf95Q9H693 158 aa11.65□□□□□ -0.54
PTPN18-201ENST00000175756 C5orf47Q569G3 176 aa11.65□□□□□ -0.54
PTPN18-201ENST00000175756 WFDC10BQ8IUB3 73 aa11.64□□□□□ -0.55
PTPN18-201ENST00000175756 C4orf26Q17RF5 130 aa11.64□□□□□ -0.55
PTPN18-201ENST00000175756 Q8NDZ9 215 aa11.64□□□□□ -0.55
PTPN18-201ENST00000175756 TRAV10A0A0B4J240 114 aa11.64□□□□□ -0.55
PTPN18-201ENST00000175756 F8WEM9 126 aa11.63□□□□□ -0.55
PTPN18-201ENST00000175756 IGHV4-30-4P0DP06 118 aa11.63□□□□□ -0.55
PTPN18-201ENST00000175756 MUC7Q8TAX7 377 aa11.63□□□□□ -0.55
PTPN18-201ENST00000175756 MIFP14174 115 aa11.62□□□□□ -0.55
PTPN18-201ENST00000175756 KPRPQ5T749 579 aaPredicted RBP11.62□□□□□ -0.55
PTPN18-201ENST00000175756 Q6ZQT0 140 aa11.62□□□□□ -0.55
PTPN18-201ENST00000175756 C6orf48Q9UBA6 75 aa11.62□□□□□ -0.55
PTPN18-201ENST00000175756 PDE6GP18545 87 aa11.62□□□□□ -0.55
PTPN18-201ENST00000175756 RPL37AP8A6NKH3 93 aa11.61□□□□□ -0.55
PTPN18-201ENST00000175756 OXLD1Q5BKU9 147 aa11.6□□□□□ -0.55
PTPN18-201ENST00000175756 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.59□□□□□ -0.55
PTPN18-201ENST00000175756 OBSCN-AS1Q96MR7 158 aa11.59□□□□□ -0.55
PTPN18-201ENST00000175756 BPY2O14599 106 aa11.59□□□□□ -0.55
PTPN18-201ENST00000175756 KRTAP10-3P60369 221 aa11.59□□□□□ -0.55
PTPN18-201ENST00000175756 TRAV7A0A075B6U4 112 aa11.58□□□□□ -0.55
PTPN18-201ENST00000175756 Q6ZRU5 148 aa11.58□□□□□ -0.55
PTPN18-201ENST00000175756 TENM4Q6N022 2769 aa11.58□□□□□ -0.56
PTPN18-201ENST00000175756 LYPD5Q6UWN5 251 aa11.58□□□□□ -0.56
PTPN18-201ENST00000175756 UBE2BP63146 152 aa11.57□□□□□ -0.56
PTPN18-201ENST00000175756 MPLKIPQ8TAP9 179 aa11.57□□□□□ -0.56
PTPN18-201ENST00000175756 VWFP04275 2813 aa11.56□□□□□ -0.56
PTPN18-201ENST00000175756 ETDCA0A1B0GVM5 59 aa11.56□□□□□ -0.56
PTPN18-201ENST00000175756 BAHCC1Q9P281 2608 aa11.56□□□□□ -0.56
PTPN18-201ENST00000175756 M0R378 163 aa11.55□□□□□ -0.56
PTPN18-201ENST00000175756 Q6ZTC4 211 aa11.55□□□□□ -0.56
PTPN18-201ENST00000175756 MRAPQ8TCY5 172 aa11.55□□□□□ -0.56
PTPN18-201ENST00000175756 FUSP35637 526 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTPN18-201ENST00000175756 TM2D3Q9BRN9 247 aa11.54□□□□□ -0.56
PTPN18-201ENST00000175756 SYCNQ0VAF6 134 aa11.54□□□□□ -0.56
PTPN18-201ENST00000175756 NSD1Q96L73 2696 aaPredicted RBP11.53□□□□□ -0.56
PTPN18-201ENST00000175756 IGLV6-57P01721 117 aa11.51□□□□□ -0.57
PTPN18-201ENST00000175756 RPS28P62857 69 aaKnown RBP11.51□□□□□ -0.57
PTPN18-201ENST00000175756 Q8NAQ8 132 aa11.5□□□□□ -0.57
PTPN18-201ENST00000175756 DEFB131BA0A096LNP1 70 aa11.5□□□□□ -0.57
PTPN18-201ENST00000175756 A0A0J9YWU9 116 aa11.5□□□□□ -0.57
PTPN18-201ENST00000175756 LINC00612Q8N6U2 182 aa11.5□□□□□ -0.57
PTPN18-201ENST00000175756 KRTAP1-1Q07627 177 aa11.49□□□□□ -0.57
PTPN18-201ENST00000175756 H3BQ85 93 aa11.49□□□□□ -0.57
PTPN18-201ENST00000175756 EGFEM1PQ0D2K5 195 aa11.48□□□□□ -0.57
PTPN18-201ENST00000175756 FAM30AQ9NZY2 134 aa11.48□□□□□ -0.57
PTPN18-201ENST00000175756 LRCOL1A6NCL2 159 aa11.48□□□□□ -0.57
PTPN18-201ENST00000175756 NDUFC2-KCTD14E9PQ53 114 aa11.48□□□□□ -0.57
PTPN18-201ENST00000175756 PRR4Q16378 134 aa11.48□□□□□ -0.57
PTPN18-201ENST00000175756 LINC00167Q96N53 147 aa11.47□□□□□ -0.57
PTPN18-201ENST00000175756 LOC110117498A0A087WWA1 95 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms