RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 CD164L2Q6UWJ8 174 aa13.73□□□□□ -0.21
PPP1R3F-201ENST00000055335 LINC00167Q96N53 147 aa13.73□□□□□ -0.21
PPP1R3F-201ENST00000055335 F8WEM9 126 aa13.71□□□□□ -0.21
PPP1R3F-201ENST00000055335 PRO0255Q9UI72 69 aa13.71□□□□□ -0.21
PPP1R3F-201ENST00000055335 SPAG11BQ08648 103 aa13.71□□□□□ -0.21
PPP1R3F-201ENST00000055335 C19orf73Q9NVV2 129 aa13.71□□□□□ -0.21
PPP1R3F-201ENST00000055335 ZNF561-AS1K7EIQ3 104 aa13.71□□□□□ -0.22
PPP1R3F-201ENST00000055335 DEFB113Q30KQ7 82 aa13.7□□□□□ -0.22
PPP1R3F-201ENST00000055335 H7BZZ5 65 aa13.7□□□□□ -0.22
PPP1R3F-201ENST00000055335 A0A1B0GUV1 79 aa13.69□□□□□ -0.22
PPP1R3F-201ENST00000055335 LINC00482Q8N8I6 264 aa13.69□□□□□ -0.22
PPP1R3F-201ENST00000055335 TRAV7A0A075B6U4 112 aa13.68□□□□□ -0.22
PPP1R3F-201ENST00000055335 IGLV1-51P01701 117 aa13.68□□□□□ -0.22
PPP1R3F-201ENST00000055335 CMC4P56277 68 aaPredicted RBP13.68□□□□□ -0.22
PPP1R3F-201ENST00000055335 Q8N9L7 120 aa13.68□□□□□ -0.22
PPP1R3F-201ENST00000055335 CYSRT1A8MQ03 144 aa13.67□□□□□ -0.22
PPP1R3F-201ENST00000055335 TM2D3Q9BRN9 247 aa13.67□□□□□ -0.22
PPP1R3F-201ENST00000055335 TRBV10-3A0A0K0K1G6 114 aa13.66□□□□□ -0.22
PPP1R3F-201ENST00000055335 KLK12Q9UKR0 248 aa13.66□□□□□ -0.22
PPP1R3F-201ENST00000055335 VWFP04275 2813 aa13.66□□□□□ -0.22
PPP1R3F-201ENST00000055335 LYPD5Q6UWN5 251 aa13.66□□□□□ -0.22
PPP1R3F-201ENST00000055335 UNC79Q9P2D8 2635 aa13.66□□□□□ -0.22
PPP1R3F-201ENST00000055335 COX17Q14061 63 aa13.65□□□□□ -0.22
PPP1R3F-201ENST00000055335 DEFB135Q30KP9 77 aa13.65□□□□□ -0.22
PPP1R3F-201ENST00000055335 NDUFC2-KCTD14E9PQ53 114 aa13.63□□□□□ -0.23
PPP1R3F-201ENST00000055335 MUC7Q8TAX7 377 aa13.62□□□□□ -0.23
PPP1R3F-201ENST00000055335 LINC00336Q6ZUF6 198 aa13.61□□□□□ -0.23
PPP1R3F-201ENST00000055335 F8P00451 2351 aa13.61□□□□□ -0.23
PPP1R3F-201ENST00000055335 DAD1P61803 113 aa13.61□□□□□ -0.23
PPP1R3F-201ENST00000055335 SERP1Q9Y6X1 66 aa13.6□□□□□ -0.23
PPP1R3F-201ENST00000055335 LINC00474Q9P2X8 69 aa13.6□□□□□ -0.23
PPP1R3F-201ENST00000055335 DIRC1Q969H9 104 aa13.6□□□□□ -0.23
PPP1R3F-201ENST00000055335 USP24Q9UPU5 2620 aa13.59□□□□□ -0.23
PPP1R3F-201ENST00000055335 HIGD2BQ4VC39 106 aa13.59□□□□□ -0.23
PPP1R3F-201ENST00000055335 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.59□□□□□ -0.23
PPP1R3F-201ENST00000055335 C1orf43Q9BWL3 253 aa13.59□□□□□ -0.23
PPP1R3F-201ENST00000055335 LOC110117498A0A087WWA1 95 aa13.57□□□□□ -0.24
PPP1R3F-201ENST00000055335 X6R8D5 127 aa13.57□□□□□ -0.24
PPP1R3F-201ENST00000055335 PKIGQ9Y2B9 76 aa13.56□□□□□ -0.24
PPP1R3F-201ENST00000055335 MPLKIPQ8TAP9 179 aa13.56□□□□□ -0.24
PPP1R3F-201ENST00000055335 IGHV4-28A0A0C4DH34 117 aa13.55□□□□□ -0.24
PPP1R3F-201ENST00000055335 DEFB105AQ8NG35 78 aa13.55□□□□□ -0.24
PPP1R3F-201ENST00000055335 ITPR2Q14571 2701 aa13.55□□□□□ -0.24
PPP1R3F-201ENST00000055335 ZNF73O43830 326 aaPredicted RBP13.54□□□□□ -0.24
PPP1R3F-201ENST00000055335 COX7BP24311 80 aa13.54□□□□□ -0.24
PPP1R3F-201ENST00000055335 C3orf84H3BNL1 204 aa13.54□□□□□ -0.24
PPP1R3F-201ENST00000055335 KLKP1Q107X0 134 aa13.53□□□□□ -0.24
PPP1R3F-201ENST00000055335 WIPF1O43516 503 aa13.52□□□□□ -0.24
PPP1R3F-201ENST00000055335 IGLV6-57P01721 117 aa13.52□□□□□ -0.24
PPP1R3F-201ENST00000055335 NREPQ16612 68 aa13.52□□□□□ -0.24
PPP1R3F-201ENST00000055335 MIFP14174 115 aa13.52□□□□□ -0.25
PPP1R3F-201ENST00000055335 BPY2O14599 106 aa13.51□□□□□ -0.25
PPP1R3F-201ENST00000055335 TRBV7-6A0A0J9YX20 115 aa13.51□□□□□ -0.25
PPP1R3F-201ENST00000055335 C6orf48Q9UBA6 75 aa13.5□□□□□ -0.25
PPP1R3F-201ENST00000055335 CELA1Q9UNI1 258 aa13.5□□□□□ -0.25
PPP1R3F-201ENST00000055335 CXCL6P80162 114 aa13.49□□□□□ -0.25
PPP1R3F-201ENST00000055335 FP248Q71RG6 208 aaPredicted RBP13.49□□□□□ -0.25
PPP1R3F-201ENST00000055335 BRK1Q8WUW1 75 aa13.49□□□□□ -0.25
PPP1R3F-201ENST00000055335 A0A0U1RQV1 116 aa13.49□□□□□ -0.25
PPP1R3F-201ENST00000055335 PDE6GP18545 87 aa13.49□□□□□ -0.25
PPP1R3F-201ENST00000055335 ATRQ13535 2644 aa13.48□□□□□ -0.25
PPP1R3F-201ENST00000055335 UBR5O95071 2799 aaPredicted RBP13.47□□□□□ -0.25
PPP1R3F-201ENST00000055335 TMEM254Q8TBM7 123 aa13.47□□□□□ -0.25
PPP1R3F-201ENST00000055335 CAMK2N2Q96S95 79 aa13.47□□□□□ -0.25
PPP1R3F-201ENST00000055335 TEP1Q99973 2627 aaKnown RBP13.47□□□□□ -0.25
PPP1R3F-201ENST00000055335 SMIM26A0A096LP01 95 aa13.47□□□□□ -0.25
PPP1R3F-201ENST00000055335 LINC00612Q8N6U2 182 aa13.45□□□□□ -0.26
PPP1R3F-201ENST00000055335 KRTAP1-3Q8IUG1 177 aa13.45□□□□□ -0.26
PPP1R3F-201ENST00000055335 FASNP49327 2511 aaKnown RBP13.43□□□□□ -0.26
PPP1R3F-201ENST00000055335 A0A0J9YWU9 116 aa13.43□□□□□ -0.26
PPP1R3F-201ENST00000055335 TRBV7-4A0A0J9YYF1 115 aa13.43□□□□□ -0.26
PPP1R3F-201ENST00000055335 IGHV4-30-4P0DP06 118 aa13.43□□□□□ -0.26
PPP1R3F-201ENST00000055335 MRAPQ8TCY5 172 aa13.42□□□□□ -0.26
PPP1R3F-201ENST00000055335 C9orf66Q5T8R8 295 aa13.42□□□□□ -0.26
PPP1R3F-201ENST00000055335 LRCOL1A6NCL2 159 aa13.42□□□□□ -0.26
PPP1R3F-201ENST00000055335 PRO0628Q9UI54 55 aa13.42□□□□□ -0.26
PPP1R3F-201ENST00000055335 LYRM9A8MSI8 78 aa13.41□□□□□ -0.26
PPP1R3F-201ENST00000055335 PKD1L1Q8TDX9 2849 aa13.41□□□□□ -0.26
PPP1R3F-201ENST00000055335 BCE1O60756 84 aa13.39□□□□□ -0.27
PPP1R3F-201ENST00000055335 FAM229BQ4G0N7 80 aa13.39□□□□□ -0.27
PPP1R3F-201ENST00000055335 HIGD2AQ9BW72 106 aa13.39□□□□□ -0.27
PPP1R3F-201ENST00000055335 PRB2P02812 416 aaPredicted RBP13.38□□□□□ -0.27
PPP1R3F-201ENST00000055335 ELOF1P60002 83 aaKnown RBP13.38□□□□□ -0.27
PPP1R3F-201ENST00000055335 HIVEP1P15822 2718 aa13.38□□□□□ -0.27
PPP1R3F-201ENST00000055335 LELP1Q5T871 98 aa13.37□□□□□ -0.27
PPP1R3F-201ENST00000055335 SMR3AQ99954 134 aa13.37□□□□□ -0.27
PPP1R3F-201ENST00000055335 FAM30AQ9NZY2 134 aa13.37□□□□□ -0.27
PPP1R3F-201ENST00000055335 Q6ZRU5 148 aa13.36□□□□□ -0.27
PPP1R3F-201ENST00000055335 TENM1Q9UKZ4 2725 aa13.35□□□□□ -0.27
PPP1R3F-201ENST00000055335 NDUFC1O43677 76 aa13.35□□□□□ -0.27
PPP1R3F-201ENST00000055335 C16orf95Q9H693 158 aa13.35□□□□□ -0.27
PPP1R3F-201ENST00000055335 KRTAP10-3P60369 221 aa13.35□□□□□ -0.27
PPP1R3F-201ENST00000055335 PDZD2O15018 2839 aa13.34□□□□□ -0.27
PPP1R3F-201ENST00000055335 WFDC10BQ8IUB3 73 aa13.34□□□□□ -0.27
PPP1R3F-201ENST00000055335 FUSP35637 526 aaKnown RBP eCLIP13.33□□□□□ -0.27
PPP1R3F-201ENST00000055335 EPM2AB3EWF7 344 aa13.33□□□□□ -0.28
PPP1R3F-201ENST00000055335 VPREB1P12018 145 aa13.33□□□□□ -0.28
PPP1R3F-201ENST00000055335 PRYO14603 147 aa13.32□□□□□ -0.28
PPP1R3F-201ENST00000055335 SPART-AS1P0CW21 52 aa13.32□□□□□ -0.28
PPP1R3F-201ENST00000055335 IGKV4-1P06312 121 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms