RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Tmem89Q9DA04 169 aa17.67■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Igkv1-131A0A140T8M8 120 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Ldlrad2Q3V0V0 142 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Klre1Q8CJC7 226 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Olfr1445Q8VFW9 314 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Olfr802Q8VGJ2 312 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Olfr709-ps1A0A140T8J9 307 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Olfr1192-ps1A0A1L1SRD7 309 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Plcxd2B2RXA1 340 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Atp6v0cP63082 155 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Gm10188Q3V432 135 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Olfr1243Q8VGM7 305 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Necap1Q9CR95 275 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Q9D8L0 127 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Trappc2lQ9JME7 139 aa17.66■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Nav3Q80TN7 2359 aa17.65■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Gm21900J3QP38 180 aa17.65■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Gm26661M0QWV4 156 aa17.65■□□□□ 0.42
Scn1b-201ENSMUST00000098548 P01727 129 aa17.65■□□□□ 0.42
Scn1b-201ENSMUST00000098548 GchfrP99025 84 aa17.65■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Sh3bgrl3Q91VW3 93 aa17.65■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Itpr2Q9Z329 2701 aa17.65■□□□□ 0.42
Scn1b-201ENSMUST00000098548 AtrQ9JKK8 2635 aa17.65■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Gm6096D3YTY6 151 aa17.64■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Tm4sf19E9Q9H8 206 aa17.64■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Gm10803Q3TZS6 135 aa17.64■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Fam173aQ501J2 229 aa17.64■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Gm5468Q8C3D3 155 aa17.64■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr810Q8VFH9 312 aa17.64■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr873Q8VFJ0 319 aa17.64■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Tmem210Q9D2F0 147 aa17.64■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Cnn3Q9DAW9 330 aaKnown RBP17.64■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Chd9Q8BYH8 2885 aa17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr1016A2ASV2 309 aa17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 BsgP18572 389 aaKnown RBP17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Rps10P63325 165 aaKnown RBP17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Sfrp2P97299 295 aa17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 CdsnQ7TPC1 561 aa17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr963Q7TRA9 311 aa17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Prr9Q8BV84 116 aa17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Eda2rQ8BX35 297 aa17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 PgpQ8CHP8 321 aa17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr1441Q8VFV3 318 aa17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr1256Q8VGP1 306 aa17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Nsd1O88491 2588 aaKnown RBP17.63■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Ighv1-15A0A0A6YXA5 117 aa17.62■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Rnase9P60154 184 aa17.62■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Susd2Q9DBX3 820 aa17.62■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Gm6525A0A0A6YW33 106 aa17.62■□□□□ 0.41
Scn1b-201ENSMUST00000098548 D830044I16RikA0A1D5RM53 117 aa17.62■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr624F8VQI7 308 aa17.62■□□□□ 0.41
Scn1b-201ENSMUST00000098548 P03980 138 aa17.62■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Fn1P11276 2477 aaKnown RBP17.62■□□□□ 0.41
Scn1b-201ENSMUST00000098548 V1rd19Q3KNP5 305 aa17.62■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Ndfip1Q8R0W6 221 aa17.62■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Derl1Q99J56 251 aa17.62■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr159Q9QZ19 319 aa17.62■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Gm5741B2RVA4 72 aa17.61■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Gm10203F6QJ09 66 aa17.61■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Rpl19P84099 196 aaKnown RBP17.61■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Fbln7Q501P1 440 aa17.61■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr1440Q8VFV4 315 aa17.61■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr33Q8VGX7 318 aa17.61■□□□□ 0.41
Scn1b-201ENSMUST00000098548 ManbalQ9D8X0 85 aa17.61■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Tspan4Q9DCK3 238 aa17.61■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Tmprss5Q9ER04 455 aa17.61■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Wnk1P83741 2377 aa17.61■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Rsg1A2A825 258 aa17.6■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Vmn1r232A2RTT5 351 aa17.6■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Gm15293D3YX02 93 aa17.6■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr218E9PWV2 313 aa17.6■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Gm3512L7N206 146 aa17.6■□□□□ 0.41
Scn1b-201ENSMUST00000098548 P01787 123 aa17.6■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Srp14P16254 110 aaKnown RBP17.6■□□□□ 0.41
Scn1b-201ENSMUST00000098548 RhogP84096 191 aa17.6■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Ripply2Q2WG76 128 aa17.6■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Ceacam12Q3UKP4 300 aa17.6■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr996Q7TRA0 314 aa17.6■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Gpr87Q99MT7 358 aa17.6■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Mettl8A2AUU0 281 aa17.59■□□□□ 0.41
Scn1b-201ENSMUST00000098548 KprpB2RUR4 657 aa17.59■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Gm26965M0QWH4 86 aa17.59■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Tnfsf11O35235 316 aa17.59■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Znf474Q6V5K9 347 aa17.59■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Znf641Q8BZ34 422 aa17.59■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr981Q8VEU2 310 aa17.59■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Rasl11bQ922H7 247 aa17.59■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Ccl24Q9JKC0 119 aa17.59■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Edn1P22387 202 aa17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr15P23275 312 aa17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Slc25a5P51881 298 aaKnown RBP17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 RanP62827 216 aaKnown RBP17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr16Q62007 309 aa17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 2810408A11RikQ6NSU2 435 aa17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Wipf2Q6PEV3 440 aa17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr823Q7TRH2 315 aa17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Rnf24Q8BGI1 148 aa17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Gm12689Q8BQU9 117 aa17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Vmn1r70Q8R254 298 aa17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 Olfr824Q8VFU4 315 aa17.58■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms