RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Pde6hP61249 83 aa12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Otx1P80205 355 aa12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 H2al1nQ497L1 109 aa12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 C1qtnf5Q8K479 243 aa12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Cysltr1Q99JA4 352 aa12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Igkv14-111A0A140T8P9 117 aa12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Ssbp1Q9CYR0 152 aaKnown RBP12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Pex7P97865 318 aa12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Fbxl7Q5BJ29 491 aa12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Klk4Q9Z0M1 255 aa12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Ang6Q5GAN0 147 aa12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Vmn1r197Q8R265 298 aa12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Rchy1Q9CR50 261 aa12.07□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 1700084M14RikB1AT01 78 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Gm6793B2RXM2 351 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Gm10881P01642 115 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 P01660 111 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Cox8bP48772 70 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Ccl12Q62401 104 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 CklfQ9DAS1 152 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Tcrg-C1A0A075B5Z0 172 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Tcrg-C3L7N479 172 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Rnf166Q3U9F6 237 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Vdac2Q60930 295 aaKnown RBP12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Pxt1Q8K459 51 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 4930583I09RikQ9D2E3 102 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Pradc1Q9D9N8 188 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Col11a1Q61245 1804 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Ighv1-31A0A0A6YWK5 117 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Gm867A0A1W2P7T4 151 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Gm6871L7N248 545 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 OtosQ8R448 89 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Gm26938S4R185 226 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Gm10775Q3V290 127 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Immp1lQ9CQU8 166 aa12.06□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Rnf138Q9CQE0 245 aaKnown RBP12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Spata45Q9CVW4 97 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Plpp2Q9DAX2 276 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Abca7Q91V24 2159 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Olfr1373Q7TQT6 311 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Ifi27l2aQ8R412 90 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Ube2cQ9D1C1 179 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 HilpdaQ9JLS0 64 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Loxhd1C8YR32 2068 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Thsd7bQ6P4U0 1607 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Gm29666A0A087WQ99 126 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 F11rO88792 300 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 P01736 120 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Defb30Q30KN4 75 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Scn2aA0A0J9YTW6 2006 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Tmem8bB1AWJ5 472 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Olfr317Q5NCD6 327 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Igfbpl1Q80W15 270 aa12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Snrnp200Q6P4T2 2136 aaKnown RBP12.05□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 3110082J24RikF6Z6Z2 108 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 P01649 108 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 P01802 115 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Rpl36aP83882 106 aaKnown RBP12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Defa20Q45VN2 95 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Trav2Q5R1I9 109 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Olfr984Q8VFN1 314 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Sfta2E9PXB6 77 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Gm11444F6QMA6 170 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Atp23Q9CWQ3 201 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 CrebbpP45481 2441 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Defa1P11477 93 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 GgctQ9D7X8 188 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Defb3Q9WTL0 63 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Gm16503Q8C6M9 103 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Fxyd1Q9Z239 92 aa12.04□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Ighv1-18A0A0A6YXN4 117 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Gm10020E9QAZ2 204 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Foxh1O88621 401 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Srsf6Q3TWW8 339 aaKnown RBP12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 5730522E02RikQ5SP45 163 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Rpl15Q9CZM2 204 aaKnown RBP12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Lyzl4Q9D925 145 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Tanc1Q0VGY8 1856 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Atg2bQ80XK6 2075 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Gm12845A0A0N4SUM5 588 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Hbb-bsA8DUK4 147 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Hbb-b1P02088 147 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Klf13Q9JJZ6 289 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 1500009C09RikD3YYW9 81 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Tex54G3UW99 86 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 P01680 129 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Repin1Q5U4E2 545 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Olfr976Q8VF15 326 aa12.03□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Shank1D3YZU1 2167 aa12.02□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Tmem141A2AJB2 108 aa12.02□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 MycbQ6P8Z1 170 aa12.02□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Lmo1Q924W9 156 aa12.02□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Cacna1iE9Q7P2 2199 aa12.02□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Dock3Q8CIQ7 2027 aa12.02□□□□□ -0.49
Pcdh20-201ENSMUST00000061628 Ints1Q6P4S8 2195 aa12.02□□□□□ -0.49
Pcdh20-201ENSMUST00000061628 Trbv3A0A0A6YYE2 117 aa12.02□□□□□ -0.49
Pcdh20-201ENSMUST00000061628 Cox7a2lQ61387 111 aa12.02□□□□□ -0.49
Pcdh20-201ENSMUST00000061628 Cdcp2Q8BQH6 427 aa12.02□□□□□ -0.49
Pcdh20-201ENSMUST00000061628 3110018I06RikQ9CXS0 120 aa12.02□□□□□ -0.49
Pcdh20-201ENSMUST00000061628 Stpg1Q9D2F5 341 aa12.02□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms