RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Ifitm2Q99J93 144 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Chac2Q9CQG1 178 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Dnajc13D4AFX7 2248 aaKnown RBP10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Gm26602M0QWA4 95 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Gata2O09100 480 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Rpl27aP14115 148 aaKnown RBP10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Vsig8Q6P3A4 417 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Rhbdd2Q8VEK2 361 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Olfr877Q8VF62 311 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Olfr1195Q8VG21 308 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Ighv6-3A0A075B5T2 118 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Nsun4C4P6S0 806 aaKnown RBP10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Gm6096D3YTY6 151 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Gm10251J3QPM5 127 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 P18532 116 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Klf14Q19A41 325 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Mrpl3Q99N95 348 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Gm2916Q9D9B9 127 aa10.74□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Med12lQ8BQM9 2157 aa10.73□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Zfp931A2AHM2 298 aa10.73□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Klre1Q8CJC7 226 aa10.73□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Pxmp4Q9JJW0 212 aa10.73□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Gm11565A2A4M7 156 aa10.73□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Vmn1r78K7N608 313 aa10.73□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Insig2Q91WG1 225 aa10.73□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Mrps11Q9DCA2 191 aaKnown RBP10.73□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Fhl3Q9R059 289 aa10.73□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Gm6993A0A1W2P738 69 aa10.72□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Tnfaip6O08859 275 aa10.72□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Col8a2P25318 699 aa10.72□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 MyocosQ3UWS6 143 aa10.72□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Znf474Q6V5K9 347 aa10.72□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Vstm2aQ8R0A6 236 aa10.72□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Cysltr1Q99JA4 352 aa10.72□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 H2al3Q9D4U4 128 aa10.72□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Zfp950A0A0U1RQ46 609 aa10.72□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Ovol3D3YYM0 189 aa10.72□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 P01790 122 aa10.72□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Q9CR34 168 aa10.72□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Nxph4G3X9N5 304 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Hoxa3P02831 443 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 ErhP84089 104 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Spink11Q09TK7 88 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Dtx1Q61010 627 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Cisd1Q91WS0 108 aaKnown RBP10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Gm21775J3KMK6 180 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Pla2g2cP48076 150 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Q08AU9 97 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Gm10384Q3UQ87 92 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Vwc2lQ505H4 222 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Zfp420Q7TMN8 578 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Igfbpl1Q80W15 270 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Zcchc10Q9CX48 178 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Crybb1Q9WVJ5 250 aa10.71□□□□□ -0.69
Prpf38b-201ENSMUST00000029480 Arid1bE9Q4N7 2244 aa10.71□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Ighv5-9A0A075B5Q2 117 aa10.71□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 BsgP18572 389 aaKnown RBP10.71□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 ClcP97400 68 aa10.71□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gm4792Q569Q2 183 aa10.71□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Rasl11aQ6IMB1 242 aa10.71□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Rph3alQ768S4 302 aa10.71□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Csmd1Q923L3 3564 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 PkigO70139 76 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Tmem190Q9D2E9 166 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Trav16A0A075B653 116 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gm20379A0A087WR34 119 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gm21974F6W3F3 119 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Tnfsf12O54907 249 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 P01723 117 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 P01739 132 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Pate4Q09098 99 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Slc35d2Q762D5 326 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Tmem204Q7TQI0 226 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Pf4Q9Z126 105 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Frem1Q684R7 2191 aa10.7□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Zfp292Q9Z2U2 2698 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Defa13P50711 93 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Tmem241Q3UME2 297 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 MiaQ61865 130 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Fam206aQ80ZQ9 193 aaKnown RBP10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Fbxl15Q91W61 300 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Nus1Q99LJ8 297 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gpa33Q9JKA5 319 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Olfr1192-ps1A0A1L1SRD7 309 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 D930048N14RikA2AA67 225 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 eef1akmt3D3YWP0 232 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Tnfsf11O35235 316 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Rpl8P62918 257 aaKnown RBP10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gimap1P70224 277 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Vmn1r195Q5SVD6 316 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Msrb3Q8BU85 253 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Mrpl16Q99N93 251 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Ros1Q78DX7 2340 aa10.69□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Trbv19A0A0B4J1H4 117 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Igkv14-130A0A0G2JF45 117 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gm45785A0A1B0GT05 94 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Spint5J3KMK8 105 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gm21900J3QP38 180 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Ascl2O35885 263 aa10.68□□□□□ -0.7
Prpf38b-201ENSMUST00000029480 Gm10334Q792Y8 246 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 123.7 ms