RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 IGLV5-45A0A087WSX0 123 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 TRAV13-2A0A0B4J235 113 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 BCE1O60756 84 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 RPL35AP18077 110 aaKnown RBP4.22□□□□□ -1.73
CASC19-260ENST00000641828 ECSCRQ19T08 205 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 TMEM86BQ8N661 226 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 Q8N9W7 124 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 MINOS1-NBL1R4GNA1 71 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 NOTCH1P46531 2555 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 IGHV3-16A0A0C4DH30 117 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 H0YGX0 51 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 XCL1P47992 114 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 SEC61GP60059 68 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 KRTAP24-1Q3LI83 254 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 CD164L2Q6UWJ8 174 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 Q9HAA7 133 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 C14orf132Q9NPU4 83 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 XCL2Q9UBD3 114 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 TRBV10-3A0A0K0K1G6 114 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 KNCNA6PVL3 124 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 F6UB75 175 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 NDUFA4O00483 81 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 ATP6V0E1O15342 81 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 RS1O15537 224 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 FAM223AQ8IWN6 122 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 CDKN2A-AS1Q9UH64 79 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 V9GYY9 64 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 MAP1AP78559 2803 aaPredicted RBP4.21□□□□□ -1.74
CASC19-260ENST00000641828 E7EQL1 145 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 IGHV4-31P0DP07 118 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 DEFB1P60022 68 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 LYPD5Q6UWN5 251 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 SOSTDC1Q6X4U4 206 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 C20orf197Q8N268 126 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 TLN2Q9Y4G6 2542 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 H7BZZ5 65 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 TRBV12-3P01733 135 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 CCKP06307 115 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 SIRPDQ9H106 197 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 C16orf95Q9H693 158 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 PKIGQ9Y2B9 76 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 SONP18583 2426 aaKnown RBP4.19□□□□□ -1.74
CASC19-260ENST00000641828 LYNX1G3V0Z9 82 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 G3V318 75 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 CRPP02741 224 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 LYNX1P0DP58 116 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 KLKP1Q107X0 134 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 RNASE13Q5GAN3 156 aaKnown RBP4.19□□□□□ -1.74
CASC19-260ENST00000641828 TGP01266 2768 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 PKD1L1Q8TDX9 2849 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 TRAV7A0A075B6U4 112 aa4.18□□□□□ -1.74
CASC19-260ENST00000641828 TRAV23DV6A0A075B6W5 121 aa4.18□□□□□ -1.74
CASC19-260ENST00000641828 C9orf129Q5T035 196 aaKnown RBP4.18□□□□□ -1.74
CASC19-260ENST00000641828 C1orf195Q5TG92 126 aa4.18□□□□□ -1.74
CASC19-260ENST00000641828 CHCHD7Q9BUK0 85 aa4.18□□□□□ -1.74
CASC19-260ENST00000641828 IGHV1OR15-1A0A075B7D0 117 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 A0A0U1RRA0 63 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 JMJD7-PLA2G4BH0Y9G9 81 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 UNQ9165/PRO28630Q6UXU0 137 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 FP248Q71RG6 208 aaPredicted RBP4.17□□□□□ -1.74
CASC19-260ENST00000641828 FAM19A3Q7Z5A8 133 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 ZNF625Q96I27 306 aaPredicted RBP4.17□□□□□ -1.74
CASC19-260ENST00000641828 A0A087WYN8 130 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 NDUFC1O43677 76 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
CASC19-260ENST00000641828 HILS1P60008 231 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 NCR3O14931 201 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 COX6A2Q02221 97 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.16□□□□□ -1.74
CASC19-260ENST00000641828 SMIM11BQ8TCY0 68 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 RHPN1-AS1Q9BWJ2 59 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 ORMDL1Q9P0S3 153 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 IGLV9-49A0A0B4J1Y8 123 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 DNAJC9-AS1A6NH13 148 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 SMIM1B2RUZ4 78 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 LINC00242Q5T6M2 205 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 ENHOQ6UWT2 76 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 LINC00337Q8N6G1 96 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 UBL5Q9BZL1 73 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 IGKV3-7A0A075B6H7 116 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.15□□□□□ -1.75
CASC19-260ENST00000641828 IGKV2-29A2NJV5 120 aaPredicted RBP4.15□□□□□ -1.75
CASC19-260ENST00000641828 LECT2O14960 151 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 FAM19A1Q7Z5A9 133 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 MIR7-3HGQ8N6C7 128 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 USMG5Q96IX5 58 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 LINC00467Q9BRT7 94 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 SND1-IT1Q9HBX3 110 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 IGKV2-28A0A075B6P5 120 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 IGHV3OR16-12A0A075B7B8 117 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 TMEM89A2RUT3 159 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 IGKV2D-28P01615 120 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 BLCAPP62952 87 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 RPL36AP83881 106 aaKnown RBP4.14□□□□□ -1.75
CASC19-260ENST00000641828 BRK1Q8WUW1 75 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 TRBV7-6A0A0J9YX20 115 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 K7EMT4 169 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 TMEM256-PLSCR3K7ERE1 68 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 RBM3P98179 157 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms