RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 GAGE2EQ4V326 116 aa11.66□□□□□ -0.54
PHGDH-223ENST00000641597 ANAPC13Q9BS18 74 aa11.66□□□□□ -0.54
PHGDH-223ENST00000641597 GAGE2DQ9UEU5 116 aa11.66□□□□□ -0.54
PHGDH-223ENST00000641597 IGLV10-54A0A075B6I4 117 aa11.66□□□□□ -0.54
PHGDH-223ENST00000641597 LY6G6DO95868 133 aa11.65□□□□□ -0.54
PHGDH-223ENST00000641597 CRPP02741 224 aa11.65□□□□□ -0.54
PHGDH-223ENST00000641597 BAALC-AS2P0C853 105 aa11.65□□□□□ -0.54
PHGDH-223ENST00000641597 C9orf129Q5T035 196 aaKnown RBP11.65□□□□□ -0.54
PHGDH-223ENST00000641597 A0A087WYN8 130 aa11.65□□□□□ -0.55
PHGDH-223ENST00000641597 ATP5G1P05496 136 aa11.65□□□□□ -0.55
PHGDH-223ENST00000641597 SMIM11BQ8TCY0 68 aa11.65□□□□□ -0.55
PHGDH-223ENST00000641597 PRR3P79522 188 aaKnown RBP11.64□□□□□ -0.55
PHGDH-223ENST00000641597 C6orf226Q5I0X4 101 aa11.63□□□□□ -0.55
PHGDH-223ENST00000641597 KIR2DL5BQ8NHK3 375 aa11.62□□□□□ -0.55
PHGDH-223ENST00000641597 INAFM1C9JVW0 142 aa11.62□□□□□ -0.55
PHGDH-223ENST00000641597 PAX4O43316 350 aa11.62□□□□□ -0.55
PHGDH-223ENST00000641597 DEFB121Q5J5C9 76 aa11.62□□□□□ -0.55
PHGDH-223ENST00000641597 LINC00612Q8N6U2 182 aa11.62□□□□□ -0.55
PHGDH-223ENST00000641597 SMCR5Q8TEV8 140 aa11.62□□□□□ -0.55
PHGDH-223ENST00000641597 COPS9Q8WXC6 57 aa11.62□□□□□ -0.55
PHGDH-223ENST00000641597 LINC00269Q8N2A0 174 aa11.61□□□□□ -0.55
PHGDH-223ENST00000641597 NDUFV3P56181 108 aaKnown RBP11.61□□□□□ -0.55
PHGDH-223ENST00000641597 OR13C6PQ8NH95 151 aa11.6□□□□□ -0.55
PHGDH-223ENST00000641597 TRAV13-2A0A0B4J235 113 aa11.6□□□□□ -0.55
PHGDH-223ENST00000641597 RPL28P46779 137 aaKnown RBP11.6□□□□□ -0.55
PHGDH-223ENST00000641597 C9orf116Q5BN46 136 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-223ENST00000641597 CELA1Q9UNI1 258 aa11.6□□□□□ -0.55
PHGDH-223ENST00000641597 SLPIP03973 132 aa11.59□□□□□ -0.55
PHGDH-223ENST00000641597 PRO0255Q9UI72 69 aa11.59□□□□□ -0.55
PHGDH-223ENST00000641597 TRACP01848 142 aa11.58□□□□□ -0.56
PHGDH-223ENST00000641597 IBA57-AS1B1ANH7 110 aa11.58□□□□□ -0.56
PHGDH-223ENST00000641597 LINC00526Q96FQ7 95 aa11.58□□□□□ -0.56
PHGDH-223ENST00000641597 HTN3P15516 51 aa11.57□□□□□ -0.56
PHGDH-223ENST00000641597 IGHV4-28A0A0C4DH34 117 aa11.56□□□□□ -0.56
PHGDH-223ENST00000641597 SS18Q15532 418 aa11.56□□□□□ -0.56
PHGDH-223ENST00000641597 CCDC179H3BU77 68 aa11.55□□□□□ -0.56
PHGDH-223ENST00000641597 LECT2O14960 151 aa11.55□□□□□ -0.56
PHGDH-223ENST00000641597 ANGP03950 147 aaKnown RBP11.55□□□□□ -0.56
PHGDH-223ENST00000641597 FAM240AA0A1B0GVK7 77 aa11.54□□□□□ -0.56
PHGDH-223ENST00000641597 MALP21145 153 aa11.54□□□□□ -0.56
PHGDH-223ENST00000641597 A0A1B0GUV1 79 aa11.53□□□□□ -0.56
PHGDH-223ENST00000641597 B5MCH6 92 aa11.53□□□□□ -0.56
PHGDH-223ENST00000641597 GAGE2AQ6NT46 116 aa11.53□□□□□ -0.56
PHGDH-223ENST00000641597 Q8NDZ9 215 aa11.53□□□□□ -0.56
PHGDH-223ENST00000641597 CHCHD10Q8WYQ3 142 aaPredicted RBP11.52□□□□□ -0.56
PHGDH-223ENST00000641597 C14orf132Q9NPU4 83 aa11.52□□□□□ -0.56
PHGDH-223ENST00000641597 TENM3Q9P273 2699 aa11.52□□□□□ -0.57
PHGDH-223ENST00000641597 KIAA0087Q14695 138 aa11.51□□□□□ -0.57
PHGDH-223ENST00000641597 C6orf223Q8N319 242 aa11.51□□□□□ -0.57
PHGDH-223ENST00000641597 DNAL4O96015 105 aa11.5□□□□□ -0.57
PHGDH-223ENST00000641597 DAD1P61803 113 aa11.5□□□□□ -0.57
PHGDH-223ENST00000641597 REG3AQ06141 175 aa11.5□□□□□ -0.57
PHGDH-223ENST00000641597 Q8IZM0 81 aa11.5□□□□□ -0.57
PHGDH-223ENST00000641597 NCR3O14931 201 aa11.5□□□□□ -0.57
PHGDH-223ENST00000641597 SS18L2Q9UHA2 77 aa11.5□□□□□ -0.57
PHGDH-223ENST00000641597 NANOS2P60321 138 aaKnown RBP11.49□□□□□ -0.57
PHGDH-223ENST00000641597 C10orf25Q5T742 122 aa11.49□□□□□ -0.57
PHGDH-223ENST00000641597 PPDPFQ9H3Y8 114 aa11.49□□□□□ -0.57
PHGDH-223ENST00000641597 STAB1Q9NY15 2570 aa11.49□□□□□ -0.57
PHGDH-223ENST00000641597 SMIM9A6NGZ8 99 aa11.48□□□□□ -0.57
PHGDH-223ENST00000641597 C9orf66Q5T8R8 295 aa11.48□□□□□ -0.57
PHGDH-223ENST00000641597 Q6Q795 121 aa11.48□□□□□ -0.57
PHGDH-223ENST00000641597 C3orf56Q8N813 242 aa11.48□□□□□ -0.57
PHGDH-223ENST00000641597 Q8NAQ8 132 aa11.48□□□□□ -0.57
PHGDH-223ENST00000641597 LYRM9A8MSI8 78 aa11.47□□□□□ -0.57
PHGDH-223ENST00000641597 CD164L2Q6UWJ8 174 aa11.47□□□□□ -0.57
PHGDH-223ENST00000641597 ANK2Q01484 3957 aa11.47□□□□□ -0.57
PHGDH-223ENST00000641597 FAM236AA0A1B0GUQ0 79 aa11.45□□□□□ -0.58
PHGDH-223ENST00000641597 FAM236BA0A1B0GV22 79 aa11.45□□□□□ -0.58
PHGDH-223ENST00000641597 UNQ6190/PRO20217Q6UXQ8 127 aa11.45□□□□□ -0.58
PHGDH-223ENST00000641597 FLNBO75369 2602 aaKnown RBP11.45□□□□□ -0.58
PHGDH-223ENST00000641597 TRBV7-7A0A0K0K1E9 115 aa11.44□□□□□ -0.58
PHGDH-223ENST00000641597 KLK12Q9UKR0 248 aa11.44□□□□□ -0.58
PHGDH-223ENST00000641597 MRPL23Q16540 153 aaKnown RBP11.43□□□□□ -0.58
PHGDH-223ENST00000641597 FBN1P35555 2871 aaKnown RBP11.43□□□□□ -0.58
PHGDH-223ENST00000641597 NOTCH1P46531 2555 aa11.42□□□□□ -0.58
PHGDH-223ENST00000641597 H0YGX0 51 aa11.42□□□□□ -0.58
PHGDH-223ENST00000641597 IGHV4-30-4P0DP06 118 aa11.42□□□□□ -0.58
PHGDH-223ENST00000641597 F8P00451 2351 aa11.42□□□□□ -0.58
PHGDH-223ENST00000641597 ACYP1P07311 99 aa11.42□□□□□ -0.58
PHGDH-223ENST00000641597 APOC4P55056 127 aa11.42□□□□□ -0.58
PHGDH-223ENST00000641597 RETNQ9HD89 108 aa11.42□□□□□ -0.58
PHGDH-223ENST00000641597 INAFM2P0DMQ5 153 aa11.4□□□□□ -0.58
PHGDH-223ENST00000641597 MAST4O15021 2626 aa11.4□□□□□ -0.58
PHGDH-223ENST00000641597 SDIM1Q6ZPB5 146 aa11.4□□□□□ -0.58
PHGDH-223ENST00000641597 LINC00643Q86TS7 51 aa11.4□□□□□ -0.58
PHGDH-223ENST00000641597 LINC00846Q9NV44 126 aa11.4□□□□□ -0.58
PHGDH-223ENST00000641597 C6orf99Q4VX62 202 aa11.38□□□□□ -0.59
PHGDH-223ENST00000641597 IGKV3D-7A0A0C4DH55 119 aa11.38□□□□□ -0.59
PHGDH-223ENST00000641597 SPAG11BQ08648 103 aa11.38□□□□□ -0.59
PHGDH-223ENST00000641597 CYSRT1A8MQ03 144 aa11.37□□□□□ -0.59
PHGDH-223ENST00000641597 SPART-AS1P0CW21 52 aa11.37□□□□□ -0.59
PHGDH-223ENST00000641597 OXLD1Q5BKU9 147 aa11.37□□□□□ -0.59
PHGDH-223ENST00000641597 ENHOQ6UWT2 76 aa11.37□□□□□ -0.59
PHGDH-223ENST00000641597 OBSCN-AS1Q96MR7 158 aa11.36□□□□□ -0.59
PHGDH-223ENST00000641597 CXCL5P42830 114 aa11.36□□□□□ -0.59
PHGDH-223ENST00000641597 ORMDL1Q9P0S3 153 aa11.36□□□□□ -0.59
PHGDH-223ENST00000641597 KLK5Q9Y337 293 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-223ENST00000641597 MIFP14174 115 aa11.35□□□□□ -0.59
PHGDH-223ENST00000641597 Q8N814 137 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms