RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	GAGE2E	Q4V326	116 aa		11.66	□□□□□ -0.54
PHGDH-223	ENST00000641597	ANAPC13	Q9BS18	74 aa		11.66	□□□□□ -0.54
PHGDH-223	ENST00000641597	GAGE2D	Q9UEU5	116 aa		11.66	□□□□□ -0.54
PHGDH-223	ENST00000641597	IGLV10-54	A0A075B6I4	117 aa		11.66	□□□□□ -0.54
PHGDH-223	ENST00000641597	LY6G6D	O95868	133 aa		11.65	□□□□□ -0.54
PHGDH-223	ENST00000641597	CRP	P02741	224 aa		11.65	□□□□□ -0.54
PHGDH-223	ENST00000641597	BAALC-AS2	P0C853	105 aa		11.65	□□□□□ -0.54
PHGDH-223	ENST00000641597	C9orf129	Q5T035	196 aa	Known RBP	11.65	□□□□□ -0.54
PHGDH-223	ENST00000641597		A0A087WYN8	130 aa		11.65	□□□□□ -0.55
PHGDH-223	ENST00000641597	ATP5G1	P05496	136 aa		11.65	□□□□□ -0.55
PHGDH-223	ENST00000641597	SMIM11B	Q8TCY0	68 aa		11.65	□□□□□ -0.55
PHGDH-223	ENST00000641597	PRR3	P79522	188 aa	Known RBP	11.64	□□□□□ -0.55
PHGDH-223	ENST00000641597	C6orf226	Q5I0X4	101 aa		11.63	□□□□□ -0.55
PHGDH-223	ENST00000641597	KIR2DL5B	Q8NHK3	375 aa		11.62	□□□□□ -0.55
PHGDH-223	ENST00000641597	INAFM1	C9JVW0	142 aa		11.62	□□□□□ -0.55
PHGDH-223	ENST00000641597	PAX4	O43316	350 aa		11.62	□□□□□ -0.55
PHGDH-223	ENST00000641597	DEFB121	Q5J5C9	76 aa		11.62	□□□□□ -0.55
PHGDH-223	ENST00000641597	LINC00612	Q8N6U2	182 aa		11.62	□□□□□ -0.55
PHGDH-223	ENST00000641597	SMCR5	Q8TEV8	140 aa		11.62	□□□□□ -0.55
PHGDH-223	ENST00000641597	COPS9	Q8WXC6	57 aa		11.62	□□□□□ -0.55
PHGDH-223	ENST00000641597	LINC00269	Q8N2A0	174 aa		11.61	□□□□□ -0.55
PHGDH-223	ENST00000641597	NDUFV3	P56181	108 aa	Known RBP	11.61	□□□□□ -0.55
PHGDH-223	ENST00000641597	OR13C6P	Q8NH95	151 aa		11.6	□□□□□ -0.55
PHGDH-223	ENST00000641597	TRAV13-2	A0A0B4J235	113 aa		11.6	□□□□□ -0.55
PHGDH-223	ENST00000641597	RPL28	P46779	137 aa	Known RBP	11.6	□□□□□ -0.55
PHGDH-223	ENST00000641597	C9orf116	Q5BN46	136 aa	Predicted RBP	11.6	□□□□□ -0.55
PHGDH-223	ENST00000641597	CELA1	Q9UNI1	258 aa		11.6	□□□□□ -0.55
PHGDH-223	ENST00000641597	SLPI	P03973	132 aa		11.59	□□□□□ -0.55
PHGDH-223	ENST00000641597	PRO0255	Q9UI72	69 aa		11.59	□□□□□ -0.55
PHGDH-223	ENST00000641597	TRAC	P01848	142 aa		11.58	□□□□□ -0.56
PHGDH-223	ENST00000641597	IBA57-AS1	B1ANH7	110 aa		11.58	□□□□□ -0.56
PHGDH-223	ENST00000641597	LINC00526	Q96FQ7	95 aa		11.58	□□□□□ -0.56
PHGDH-223	ENST00000641597	HTN3	P15516	51 aa		11.57	□□□□□ -0.56
PHGDH-223	ENST00000641597	IGHV4-28	A0A0C4DH34	117 aa		11.56	□□□□□ -0.56
PHGDH-223	ENST00000641597	SS18	Q15532	418 aa		11.56	□□□□□ -0.56
PHGDH-223	ENST00000641597	CCDC179	H3BU77	68 aa		11.55	□□□□□ -0.56
PHGDH-223	ENST00000641597	LECT2	O14960	151 aa		11.55	□□□□□ -0.56
PHGDH-223	ENST00000641597	ANG	P03950	147 aa	Known RBP	11.55	□□□□□ -0.56
PHGDH-223	ENST00000641597	FAM240A	A0A1B0GVK7	77 aa		11.54	□□□□□ -0.56
PHGDH-223	ENST00000641597	MAL	P21145	153 aa		11.54	□□□□□ -0.56
PHGDH-223	ENST00000641597		A0A1B0GUV1	79 aa		11.53	□□□□□ -0.56
PHGDH-223	ENST00000641597		B5MCH6	92 aa		11.53	□□□□□ -0.56
PHGDH-223	ENST00000641597	GAGE2A	Q6NT46	116 aa		11.53	□□□□□ -0.56
PHGDH-223	ENST00000641597		Q8NDZ9	215 aa		11.53	□□□□□ -0.56
PHGDH-223	ENST00000641597	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.52	□□□□□ -0.56
PHGDH-223	ENST00000641597	C14orf132	Q9NPU4	83 aa		11.52	□□□□□ -0.56
PHGDH-223	ENST00000641597	TENM3	Q9P273	2699 aa		11.52	□□□□□ -0.57
PHGDH-223	ENST00000641597	KIAA0087	Q14695	138 aa		11.51	□□□□□ -0.57
PHGDH-223	ENST00000641597	C6orf223	Q8N319	242 aa		11.51	□□□□□ -0.57
PHGDH-223	ENST00000641597	DNAL4	O96015	105 aa		11.5	□□□□□ -0.57
PHGDH-223	ENST00000641597	DAD1	P61803	113 aa		11.5	□□□□□ -0.57
PHGDH-223	ENST00000641597	REG3A	Q06141	175 aa		11.5	□□□□□ -0.57
PHGDH-223	ENST00000641597		Q8IZM0	81 aa		11.5	□□□□□ -0.57
PHGDH-223	ENST00000641597	NCR3	O14931	201 aa		11.5	□□□□□ -0.57
PHGDH-223	ENST00000641597	SS18L2	Q9UHA2	77 aa		11.5	□□□□□ -0.57
PHGDH-223	ENST00000641597	NANOS2	P60321	138 aa	Known RBP	11.49	□□□□□ -0.57
PHGDH-223	ENST00000641597	C10orf25	Q5T742	122 aa		11.49	□□□□□ -0.57
PHGDH-223	ENST00000641597	PPDPF	Q9H3Y8	114 aa		11.49	□□□□□ -0.57
PHGDH-223	ENST00000641597	STAB1	Q9NY15	2570 aa		11.49	□□□□□ -0.57
PHGDH-223	ENST00000641597	SMIM9	A6NGZ8	99 aa		11.48	□□□□□ -0.57
PHGDH-223	ENST00000641597	C9orf66	Q5T8R8	295 aa		11.48	□□□□□ -0.57
PHGDH-223	ENST00000641597		Q6Q795	121 aa		11.48	□□□□□ -0.57
PHGDH-223	ENST00000641597	C3orf56	Q8N813	242 aa		11.48	□□□□□ -0.57
PHGDH-223	ENST00000641597		Q8NAQ8	132 aa		11.48	□□□□□ -0.57
PHGDH-223	ENST00000641597	LYRM9	A8MSI8	78 aa		11.47	□□□□□ -0.57
PHGDH-223	ENST00000641597	CD164L2	Q6UWJ8	174 aa		11.47	□□□□□ -0.57
PHGDH-223	ENST00000641597	ANK2	Q01484	3957 aa		11.47	□□□□□ -0.57
PHGDH-223	ENST00000641597	FAM236A	A0A1B0GUQ0	79 aa		11.45	□□□□□ -0.58
PHGDH-223	ENST00000641597	FAM236B	A0A1B0GV22	79 aa		11.45	□□□□□ -0.58
PHGDH-223	ENST00000641597	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.45	□□□□□ -0.58
PHGDH-223	ENST00000641597	FLNB	O75369	2602 aa	Known RBP	11.45	□□□□□ -0.58
PHGDH-223	ENST00000641597	TRBV7-7	A0A0K0K1E9	115 aa		11.44	□□□□□ -0.58
PHGDH-223	ENST00000641597	KLK12	Q9UKR0	248 aa		11.44	□□□□□ -0.58
PHGDH-223	ENST00000641597	MRPL23	Q16540	153 aa	Known RBP	11.43	□□□□□ -0.58
PHGDH-223	ENST00000641597	FBN1	P35555	2871 aa	Known RBP	11.43	□□□□□ -0.58
PHGDH-223	ENST00000641597	NOTCH1	P46531	2555 aa		11.42	□□□□□ -0.58
PHGDH-223	ENST00000641597		H0YGX0	51 aa		11.42	□□□□□ -0.58
PHGDH-223	ENST00000641597	IGHV4-30-4	P0DP06	118 aa		11.42	□□□□□ -0.58
PHGDH-223	ENST00000641597	F8	P00451	2351 aa		11.42	□□□□□ -0.58
PHGDH-223	ENST00000641597	ACYP1	P07311	99 aa		11.42	□□□□□ -0.58
PHGDH-223	ENST00000641597	APOC4	P55056	127 aa		11.42	□□□□□ -0.58
PHGDH-223	ENST00000641597	RETN	Q9HD89	108 aa		11.42	□□□□□ -0.58
PHGDH-223	ENST00000641597	INAFM2	P0DMQ5	153 aa		11.4	□□□□□ -0.58
PHGDH-223	ENST00000641597	MAST4	O15021	2626 aa		11.4	□□□□□ -0.58
PHGDH-223	ENST00000641597	SDIM1	Q6ZPB5	146 aa		11.4	□□□□□ -0.58
PHGDH-223	ENST00000641597	LINC00643	Q86TS7	51 aa		11.4	□□□□□ -0.58
PHGDH-223	ENST00000641597	LINC00846	Q9NV44	126 aa		11.4	□□□□□ -0.58
PHGDH-223	ENST00000641597	C6orf99	Q4VX62	202 aa		11.38	□□□□□ -0.59
PHGDH-223	ENST00000641597	IGKV3D-7	A0A0C4DH55	119 aa		11.38	□□□□□ -0.59
PHGDH-223	ENST00000641597	SPAG11B	Q08648	103 aa		11.38	□□□□□ -0.59
PHGDH-223	ENST00000641597	CYSRT1	A8MQ03	144 aa		11.37	□□□□□ -0.59
PHGDH-223	ENST00000641597	SPART-AS1	P0CW21	52 aa		11.37	□□□□□ -0.59
PHGDH-223	ENST00000641597	OXLD1	Q5BKU9	147 aa		11.37	□□□□□ -0.59
PHGDH-223	ENST00000641597	ENHO	Q6UWT2	76 aa		11.37	□□□□□ -0.59
PHGDH-223	ENST00000641597	OBSCN-AS1	Q96MR7	158 aa		11.36	□□□□□ -0.59
PHGDH-223	ENST00000641597	CXCL5	P42830	114 aa		11.36	□□□□□ -0.59
PHGDH-223	ENST00000641597	ORMDL1	Q9P0S3	153 aa		11.36	□□□□□ -0.59
PHGDH-223	ENST00000641597	KLK5	Q9Y337	293 aa	Predicted RBP	11.36	□□□□□ -0.59
PHGDH-223	ENST00000641597	MIF	P14174	115 aa		11.35	□□□□□ -0.59
PHGDH-223	ENST00000641597		Q8N814	137 aa		11.35	□□□□□ -0.59

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