RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 UPK3BQ9BT76 320 aa9.72□□□□□ -0.85
SCARB2-227ENST00000640957 CDC42SE2Q9NRR3 84 aa9.72□□□□□ -0.85
SCARB2-227ENST00000640957 UBR5O95071 2799 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-227ENST00000640957 IGLV4-60A0A075B6I1 120 aa9.71□□□□□ -0.85
SCARB2-227ENST00000640957 RPL35AP18077 110 aaKnown RBP9.71□□□□□ -0.86
SCARB2-227ENST00000640957 C11orf72Q8NBR9 251 aa9.71□□□□□ -0.86
SCARB2-227ENST00000640957 STHQ8IWL8 128 aa9.71□□□□□ -0.86
SCARB2-227ENST00000640957 TMEM243Q9BU79 118 aa9.71□□□□□ -0.86
SCARB2-227ENST00000640957 Q5XG85 94 aa9.7□□□□□ -0.86
SCARB2-227ENST00000640957 WFDC11Q8NEX6 87 aa9.7□□□□□ -0.86
SCARB2-227ENST00000640957 SCXQ7RTU7 201 aa9.7□□□□□ -0.86
SCARB2-227ENST00000640957 XCL1P47992 114 aa9.69□□□□□ -0.86
SCARB2-227ENST00000640957 WFDC10AQ9H1F0 79 aa9.69□□□□□ -0.86
SCARB2-227ENST00000640957 PKIGQ9Y2B9 76 aa9.69□□□□□ -0.86
SCARB2-227ENST00000640957 TMEM258P61165 79 aa9.69□□□□□ -0.86
SCARB2-227ENST00000640957 TRGV2A0A075B6R0 118 aa9.68□□□□□ -0.86
SCARB2-227ENST00000640957 HAMPP81172 84 aa9.68□□□□□ -0.86
SCARB2-227ENST00000640957 ZNF702PQ9H963 129 aa9.68□□□□□ -0.86
SCARB2-227ENST00000640957 TRAV25A0A0B4J276 109 aa9.68□□□□□ -0.86
SCARB2-227ENST00000640957 M0R2N4 97 aa9.68□□□□□ -0.86
SCARB2-227ENST00000640957 DSCR9P59020 149 aa9.68□□□□□ -0.86
SCARB2-227ENST00000640957 FAM222AQ5U5X8 452 aa9.68□□□□□ -0.86
SCARB2-227ENST00000640957 C6orf226Q5I0X4 101 aa9.67□□□□□ -0.86
SCARB2-227ENST00000640957 MAP6D1Q9H9H5 199 aa9.67□□□□□ -0.86
SCARB2-227ENST00000640957 TEP1Q99973 2627 aaKnown RBP9.67□□□□□ -0.86
SCARB2-227ENST00000640957 ZNF469Q96JG9 3925 aaPredicted RBP9.67□□□□□ -0.86
SCARB2-227ENST00000640957 C9orf116Q5BN46 136 aaPredicted RBP9.67□□□□□ -0.86
SCARB2-227ENST00000640957 Q6JHZ5 121 aa9.67□□□□□ -0.86
SCARB2-227ENST00000640957 IGHV4-31P0DP07 118 aa9.66□□□□□ -0.86
SCARB2-227ENST00000640957 SS18Q15532 418 aa9.66□□□□□ -0.86
SCARB2-227ENST00000640957 COPS9Q8WXC6 57 aa9.66□□□□□ -0.86
SCARB2-227ENST00000640957 ORMDL1Q9P0S3 153 aa9.66□□□□□ -0.86
SCARB2-227ENST00000640957 SPATA3Q8NHX4 192 aa9.65□□□□□ -0.86
SCARB2-227ENST00000640957 INSP01308 110 aa9.65□□□□□ -0.86
SCARB2-227ENST00000640957 CR1P17927 2039 aa9.65□□□□□ -0.86
SCARB2-227ENST00000640957 UNC79Q9P2D8 2635 aa9.65□□□□□ -0.86
SCARB2-227ENST00000640957 TMEM89A2RUT3 159 aa9.65□□□□□ -0.87
SCARB2-227ENST00000640957 K7EQD1 137 aa9.65□□□□□ -0.87
SCARB2-227ENST00000640957 C1orf43Q9BWL3 253 aa9.65□□□□□ -0.87
SCARB2-227ENST00000640957 IGLV10-54A0A075B6I4 117 aa9.64□□□□□ -0.87
SCARB2-227ENST00000640957 Q6YL49 198 aa9.64□□□□□ -0.87
SCARB2-227ENST00000640957 LINC00336Q6ZUF6 198 aa9.64□□□□□ -0.87
SCARB2-227ENST00000640957 ZNF843Q8N446 348 aa9.64□□□□□ -0.87
SCARB2-227ENST00000640957 RMI2Q96E14 147 aa9.64□□□□□ -0.87
SCARB2-227ENST00000640957 RPS28P62857 69 aaKnown RBP9.64□□□□□ -0.87
SCARB2-227ENST00000640957 A0A0U1RQV1 116 aa9.63□□□□□ -0.87
SCARB2-227ENST00000640957 C1orf158Q8N1D5 194 aa9.63□□□□□ -0.87
SCARB2-227ENST00000640957 DEFB113Q30KQ7 82 aa9.63□□□□□ -0.87
SCARB2-227ENST00000640957 F8P00451 2351 aa9.62□□□□□ -0.87
SCARB2-227ENST00000640957 TRAV10A0A0B4J240 114 aa9.62□□□□□ -0.87
SCARB2-227ENST00000640957 ESM1Q9NQ30 184 aa9.61□□□□□ -0.87
SCARB2-227ENST00000640957 LINC00474Q9P2X8 69 aa9.61□□□□□ -0.87
SCARB2-227ENST00000640957 TRGV4A0A0C4DH28 118 aa9.61□□□□□ -0.87
SCARB2-227ENST00000640957 DEFB130BP0DP73 79 aa9.61□□□□□ -0.87
SCARB2-227ENST00000640957 DEFB130AP0DP74 79 aa9.61□□□□□ -0.87
SCARB2-227ENST00000640957 CCKP06307 115 aa9.6□□□□□ -0.87
SCARB2-227ENST00000640957 LAMTOR3Q9UHA4 124 aa9.6□□□□□ -0.87
SCARB2-227ENST00000640957 TENM4Q6N022 2769 aa9.6□□□□□ -0.87
SCARB2-227ENST00000640957 H0YGX0 51 aa9.6□□□□□ -0.87
SCARB2-227ENST00000640957 J3QLI3 93 aa9.6□□□□□ -0.87
SCARB2-227ENST00000640957 SMR3AQ99954 134 aa9.6□□□□□ -0.87
SCARB2-227ENST00000640957 DEFB114Q30KQ6 69 aa9.59□□□□□ -0.87
SCARB2-227ENST00000640957 Q8N3U1 123 aa9.59□□□□□ -0.87
SCARB2-227ENST00000640957 FAM236DA0A1B0GTK5 79 aa9.59□□□□□ -0.87
SCARB2-227ENST00000640957 FAM236CP0DP71 79 aa9.59□□□□□ -0.87
SCARB2-227ENST00000640957 CCL24O00175 119 aa9.58□□□□□ -0.88
SCARB2-227ENST00000640957 ODF3L2Q3SX64 289 aa9.58□□□□□ -0.88
SCARB2-227ENST00000640957 C6orf99Q4VX62 202 aa9.58□□□□□ -0.88
SCARB2-227ENST00000640957 A0A096LNT2 108 aa9.57□□□□□ -0.88
SCARB2-227ENST00000640957 PF4P02776 101 aa9.57□□□□□ -0.88
SCARB2-227ENST00000640957 UBL5Q9BZL1 73 aa9.57□□□□□ -0.88
SCARB2-227ENST00000640957 TRBV6-4A0A1B0GX49 114 aa9.56□□□□□ -0.88
SCARB2-227ENST00000640957 MPLKIPQ8TAP9 179 aa9.56□□□□□ -0.88
SCARB2-227ENST00000640957 IGHV3OR16-9A0A0B4J2B5 98 aa9.56□□□□□ -0.88
SCARB2-227ENST00000640957 F8WEM9 126 aa9.56□□□□□ -0.88
SCARB2-227ENST00000640957 LINC00269Q8N2A0 174 aa9.56□□□□□ -0.88
SCARB2-227ENST00000640957 Q8N814 137 aa9.55□□□□□ -0.88
SCARB2-227ENST00000640957 Q8N9L7 120 aa9.55□□□□□ -0.88
SCARB2-227ENST00000640957 DNAJC9-AS1A6NH13 148 aa9.55□□□□□ -0.88
SCARB2-227ENST00000640957 RBM3P98179 157 aaKnown RBP9.55□□□□□ -0.88
SCARB2-227ENST00000640957 Q8NDZ9 215 aa9.55□□□□□ -0.88
SCARB2-227ENST00000640957 OBSCN-AS1Q96MR7 158 aa9.55□□□□□ -0.88
SCARB2-227ENST00000640957 OVOL2Q9BRP0 275 aa9.54□□□□□ -0.88
SCARB2-227ENST00000640957 VWFP04275 2813 aa9.53□□□□□ -0.88
SCARB2-227ENST00000640957 NANOS2P60321 138 aaKnown RBP9.53□□□□□ -0.88
SCARB2-227ENST00000640957 DAD1P61803 113 aa9.53□□□□□ -0.88
SCARB2-227ENST00000640957 TMEM86BQ8N661 226 aa9.53□□□□□ -0.88
SCARB2-227ENST00000640957 C4orf3Q8WVX3 66 aa9.53□□□□□ -0.88
SCARB2-227ENST00000640957 H7BZZ5 65 aa9.52□□□□□ -0.89
SCARB2-227ENST00000640957 LYPD5Q6UWN5 251 aa9.52□□□□□ -0.89
SCARB2-227ENST00000640957 BRK1Q8WUW1 75 aa9.52□□□□□ -0.89
SCARB2-227ENST00000640957 IBA57-AS1B1ANH7 110 aa9.52□□□□□ -0.89
SCARB2-227ENST00000640957 DEFB4AO15263 64 aa9.52□□□□□ -0.89
SCARB2-227ENST00000640957 PRB2P02812 416 aaPredicted RBP9.52□□□□□ -0.89
SCARB2-227ENST00000640957 S100A7L2Q5SY68 101 aa9.52□□□□□ -0.89
SCARB2-227ENST00000640957 TM2D3Q9BRN9 247 aa9.51□□□□□ -0.89
SCARB2-227ENST00000640957 LRCOL1A6NCL2 159 aa9.51□□□□□ -0.89
SCARB2-227ENST00000640957 LINC00959A0A1B0GUT2 108 aa9.51□□□□□ -0.89
SCARB2-227ENST00000640957 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-227ENST00000640957 TRBV6-8A0A0A6YYG3 113 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms