RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	PDZD2	O15018	2839 aa		5.72	□□□□□ -1.49
RTTN-223	ENST00000640931	SON	P18583	2426 aa	Known RBP	5.72	□□□□□ -1.49
RTTN-223	ENST00000640931	TMEM256-PLSCR3	K7ERE1	68 aa		5.71	□□□□□ -1.49
RTTN-223	ENST00000640931	GPHB5	Q86YW7	130 aa		5.71	□□□□□ -1.49
RTTN-223	ENST00000640931	CCDC168	Q8NDH2	2452 aa		5.71	□□□□□ -1.5
RTTN-223	ENST00000640931		F6UB75	175 aa		5.71	□□□□□ -1.5
RTTN-223	ENST00000640931	ERC2-IT1	O76042	136 aa		5.71	□□□□□ -1.5
RTTN-223	ENST00000640931		Q6ZSV7	163 aa		5.71	□□□□□ -1.5
RTTN-223	ENST00000640931	PHLDA3	Q9Y5J5	127 aa		5.71	□□□□□ -1.5
RTTN-223	ENST00000640931	ITPR2	Q14571	2701 aa		5.71	□□□□□ -1.5
RTTN-223	ENST00000640931	FSHB	P01225	129 aa		5.7	□□□□□ -1.5
RTTN-223	ENST00000640931	IGLV1-40	P01703	118 aa		5.7	□□□□□ -1.5
RTTN-223	ENST00000640931	C14orf132	Q9NPU4	83 aa		5.7	□□□□□ -1.5
RTTN-223	ENST00000640931	DEFB136	Q30KP8	78 aa		5.7	□□□□□ -1.5
RTTN-223	ENST00000640931	SPATA3	Q8NHX4	192 aa		5.7	□□□□□ -1.5
RTTN-223	ENST00000640931	ZNF702P	Q9H963	129 aa		5.7	□□□□□ -1.5
RTTN-223	ENST00000640931	C11orf21	Q9P2W6	132 aa		5.7	□□□□□ -1.5
RTTN-223	ENST00000640931	CD28	P10747	220 aa		5.69	□□□□□ -1.5
RTTN-223	ENST00000640931	RPL11	P62913	178 aa	Known RBP	5.69	□□□□□ -1.5
RTTN-223	ENST00000640931	PRR9	Q5T870	116 aa		5.69	□□□□□ -1.5
RTTN-223	ENST00000640931	ENHO	Q6UWT2	76 aa		5.69	□□□□□ -1.5
RTTN-223	ENST00000640931		Q6YL49	198 aa		5.69	□□□□□ -1.5
RTTN-223	ENST00000640931	ACAN	P16112	2415 aa		5.69	□□□□□ -1.5
RTTN-223	ENST00000640931		A0A087WWL8	130 aa		5.68	□□□□□ -1.5
RTTN-223	ENST00000640931	TRBV7-4	A0A0J9YYF1	115 aa		5.68	□□□□□ -1.5
RTTN-223	ENST00000640931	SMR3A	Q99954	134 aa		5.68	□□□□□ -1.5
RTTN-223	ENST00000640931		A0A087WZ39	114 aa		5.68	□□□□□ -1.5
RTTN-223	ENST00000640931	IGHV3-30-3	P0DP02	117 aa		5.68	□□□□□ -1.5
RTTN-223	ENST00000640931	SERTAD4-AS1	Q5TG53	156 aa		5.68	□□□□□ -1.5
RTTN-223	ENST00000640931	SPANXN1	Q5VSR9	72 aa		5.68	□□□□□ -1.5
RTTN-223	ENST00000640931	LCA10	Q71F78	164 aa		5.68	□□□□□ -1.5
RTTN-223	ENST00000640931	F8	P00451	2351 aa		5.68	□□□□□ -1.5
RTTN-223	ENST00000640931	IGHV4OR15-8	A0A075B7B6	117 aa		5.67	□□□□□ -1.5
RTTN-223	ENST00000640931		A0A087WW49	117 aa		5.67	□□□□□ -1.5
RTTN-223	ENST00000640931	IGHV7-4-1	A0A0J9YVY3	117 aa		5.67	□□□□□ -1.5
RTTN-223	ENST00000640931	FUS	P35637	526 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
RTTN-223	ENST00000640931	RHPN1-AS1	Q9BWJ2	59 aa		5.67	□□□□□ -1.5
RTTN-223	ENST00000640931	FLNA	P21333	2647 aa	Known RBP	5.67	□□□□□ -1.5
RTTN-223	ENST00000640931	KRTAP1-1	Q07627	177 aa		5.67	□□□□□ -1.5
RTTN-223	ENST00000640931	OPRPN	Q99935	248 aa	Predicted RBP	5.67	□□□□□ -1.5
RTTN-223	ENST00000640931	UBL5	Q9BZL1	73 aa		5.67	□□□□□ -1.5
RTTN-223	ENST00000640931	OTOG	Q6ZRI0	2925 aa		5.66	□□□□□ -1.5
RTTN-223	ENST00000640931	IGKV3D-20	A0A0C4DH25	116 aa		5.66	□□□□□ -1.5
RTTN-223	ENST00000640931	NDUFA4	O00483	81 aa		5.66	□□□□□ -1.5
RTTN-223	ENST00000640931		Q6ZTC4	211 aa		5.66	□□□□□ -1.5
RTTN-223	ENST00000640931	USMG5	Q96IX5	58 aa		5.66	□□□□□ -1.5
RTTN-223	ENST00000640931	ESM1	Q9NQ30	184 aa		5.66	□□□□□ -1.5
RTTN-223	ENST00000640931	NDUFA12	Q9UI09	145 aa		5.66	□□□□□ -1.5
RTTN-223	ENST00000640931	DNHD1	Q96M86	4753 aa		5.66	□□□□□ -1.5
RTTN-223	ENST00000640931	hDV103S1	A0JD37	113 aa		5.65	□□□□□ -1.5
RTTN-223	ENST00000640931	SLURP1	P55000	103 aa		5.65	□□□□□ -1.5
RTTN-223	ENST00000640931	PIK3CD-AS1	Q5SR53	167 aa		5.65	□□□□□ -1.5
RTTN-223	ENST00000640931		Q6ZRP5	223 aa		5.65	□□□□□ -1.5
RTTN-223	ENST00000640931	WFDC9	Q8NEX5	89 aa		5.65	□□□□□ -1.5
RTTN-223	ENST00000640931	FAM218A	Q96MZ4	157 aa		5.65	□□□□□ -1.5
RTTN-223	ENST00000640931	IGKV3-20	P01619	116 aa		5.65	□□□□□ -1.51
RTTN-223	ENST00000640931	ATP11AUN	Q6ZP68	121 aa		5.65	□□□□□ -1.51
RTTN-223	ENST00000640931		Q8N3U1	123 aa		5.65	□□□□□ -1.51
RTTN-223	ENST00000640931	RPL39L	Q96EH5	51 aa	Known RBP	5.65	□□□□□ -1.51
RTTN-223	ENST00000640931	UBE2A	P49459	152 aa		5.64	□□□□□ -1.51
RTTN-223	ENST00000640931	C7orf65	Q6ZTY9	151 aa		5.64	□□□□□ -1.51
RTTN-223	ENST00000640931	TMEM254	Q8TBM7	123 aa		5.64	□□□□□ -1.51
RTTN-223	ENST00000640931	IGHV3-64	A0A075B6Q5	118 aa		5.63	□□□□□ -1.51
RTTN-223	ENST00000640931		A8MUN3	132 aa		5.63	□□□□□ -1.51
RTTN-223	ENST00000640931		H3BUA1	57 aa		5.63	□□□□□ -1.51
RTTN-223	ENST00000640931	VCY	O14598	125 aa		5.63	□□□□□ -1.51
RTTN-223	ENST00000640931	SYCN	Q0VAF6	134 aa		5.63	□□□□□ -1.51
RTTN-223	ENST00000640931	KRTAP9-2	Q9BYQ4	174 aa		5.63	□□□□□ -1.51
RTTN-223	ENST00000640931		Q9HAA7	133 aa		5.63	□□□□□ -1.51
RTTN-223	ENST00000640931	JMJD7-PLA2G4B	H0Y9G9	81 aa		5.63	□□□□□ -1.51
RTTN-223	ENST00000640931	PRY	O14603	147 aa		5.63	□□□□□ -1.51
RTTN-223	ENST00000640931	DIRC1	Q969H9	104 aa		5.63	□□□□□ -1.51
RTTN-223	ENST00000640931	TRAV10	A0A0B4J240	114 aa		5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	DNAJC9-AS1	A6NH13	148 aa		5.62	□□□□□ -1.51
RTTN-223	ENST00000640931		A6NN06	94 aa		5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	POLR2K	P53803	58 aa	Known RBP	5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	C9orf129	Q5T035	196 aa	Known RBP	5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	ZFAND2A	Q8N6M9	145 aa		5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	LINC00308	Q8TCZ7	52 aa		5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	ZNF625	Q96I27	306 aa	Predicted RBP	5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	SORL1	Q92673	2214 aa		5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	TRAV22	A0A0B4J277	110 aa		5.62	□□□□□ -1.51
RTTN-223	ENST00000640931		H0YGX0	51 aa		5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	GNRH2	O43555	120 aa		5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	RPL39	P62891	51 aa	Known RBP	5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	C9orf47	Q6ZRZ4	202 aa		5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	LINC00269	Q8N2A0	174 aa		5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	DEFB104A	Q8WTQ1	72 aa		5.62	□□□□□ -1.51
RTTN-223	ENST00000640931	PRM2	P04554	102 aa		5.61	□□□□□ -1.51
RTTN-223	ENST00000640931		A0A0J9YXV3	536 aa		5.6	□□□□□ -1.51
RTTN-223	ENST00000640931	NDUFA1	O15239	70 aa		5.6	□□□□□ -1.51
RTTN-223	ENST00000640931	MED14OS	P0DP75	135 aa		5.6	□□□□□ -1.51
RTTN-223	ENST00000640931	ZNF580	Q9UK33	172 aa		5.6	□□□□□ -1.51
RTTN-223	ENST00000640931	MTOR	P42345	2549 aa		5.6	□□□□□ -1.51
RTTN-223	ENST00000640931	KRTAP9-6	A0A140TA67	174 aa		5.6	□□□□□ -1.51
RTTN-223	ENST00000640931	NREP	Q16612	68 aa		5.6	□□□□□ -1.51
RTTN-223	ENST00000640931	NCR3	O14931	201 aa		5.59	□□□□□ -1.51
RTTN-223	ENST00000640931	PSPHP1	O15172	72 aa		5.59	□□□□□ -1.51
RTTN-223	ENST00000640931	MGP	P08493	103 aa		5.59	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms