RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 FAM19A3Q7Z5A8 133 aa4□□□□□ -1.77
SCN3A-210ENST00000640652 Q6ZSV7 163 aa3.99□□□□□ -1.77
SCN3A-210ENST00000640652 RBM3P98179 157 aaKnown RBP3.99□□□□□ -1.77
SCN3A-210ENST00000640652 Q8IZM0 81 aa3.99□□□□□ -1.77
SCN3A-210ENST00000640652 HTN3P15516 51 aa3.99□□□□□ -1.77
SCN3A-210ENST00000640652 COX6A2Q02221 97 aa3.99□□□□□ -1.77
SCN3A-210ENST00000640652 C18orf65Q6ZTR6 163 aa3.99□□□□□ -1.77
SCN3A-210ENST00000640652 LITAFQ99732 161 aa3.99□□□□□ -1.77
SCN3A-210ENST00000640652 A0A1B0GUV1 79 aa3.99□□□□□ -1.77
SCN3A-210ENST00000640652 A8MTW9 85 aa3.98□□□□□ -1.77
SCN3A-210ENST00000640652 Q9HAA7 133 aa3.98□□□□□ -1.77
SCN3A-210ENST00000640652 Q6ZSN1 163 aa3.98□□□□□ -1.77
SCN3A-210ENST00000640652 TMEM258P61165 79 aa3.98□□□□□ -1.77
SCN3A-210ENST00000640652 CD164L2Q6UWJ8 174 aa3.98□□□□□ -1.77
SCN3A-210ENST00000640652 DEFB121Q5J5C9 76 aa3.98□□□□□ -1.77
SCN3A-210ENST00000640652 HIVEP1P15822 2718 aa3.98□□□□□ -1.77
SCN3A-210ENST00000640652 VWFP04275 2813 aa3.98□□□□□ -1.77
SCN3A-210ENST00000640652 CCDC179H3BU77 68 aa3.98□□□□□ -1.77
SCN3A-210ENST00000640652 RBMY1FQ15415 496 aaKnown RBP3.98□□□□□ -1.77
SCN3A-210ENST00000640652 SHISA2Q6UWI4 295 aa3.98□□□□□ -1.77
SCN3A-210ENST00000640652 SPART-AS1P0CW21 52 aa3.97□□□□□ -1.77
SCN3A-210ENST00000640652 LINC01561Q8N1V8 128 aa3.97□□□□□ -1.77
SCN3A-210ENST00000640652 PRM2P04554 102 aa3.97□□□□□ -1.77
SCN3A-210ENST00000640652 LINC00694P0DN24 101 aa3.97□□□□□ -1.77
SCN3A-210ENST00000640652 REG3AQ06141 175 aa3.97□□□□□ -1.77
SCN3A-210ENST00000640652 FHL3Q13643 280 aa3.97□□□□□ -1.77
SCN3A-210ENST00000640652 IGLV1-51P01701 117 aa3.97□□□□□ -1.77
SCN3A-210ENST00000640652 SMIM11BQ8TCY0 68 aa3.97□□□□□ -1.77
SCN3A-210ENST00000640652 IGLV10-54A0A075B6I4 117 aa3.97□□□□□ -1.77
SCN3A-210ENST00000640652 SDIM1Q6ZPB5 146 aa3.97□□□□□ -1.77
SCN3A-210ENST00000640652 LINC00269Q8N2A0 174 aa3.97□□□□□ -1.77
SCN3A-210ENST00000640652 NKAPP1Q8N9T2 125 aa3.97□□□□□ -1.77
SCN3A-210ENST00000640652 PRB1P04280 392 aa3.96□□□□□ -1.78
SCN3A-210ENST00000640652 STAB2Q8WWQ8 2551 aa3.96□□□□□ -1.78
SCN3A-210ENST00000640652 SPAG11BQ08648 103 aa3.96□□□□□ -1.78
SCN3A-210ENST00000640652 Q6JHZ5 121 aa3.96□□□□□ -1.78
SCN3A-210ENST00000640652 CHCHD10Q8WYQ3 142 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-210ENST00000640652 CCL18P55774 89 aa3.96□□□□□ -1.78
SCN3A-210ENST00000640652 DEFB135Q30KP9 77 aa3.96□□□□□ -1.78
SCN3A-210ENST00000640652 LINC00337Q8N6G1 96 aa3.96□□□□□ -1.78
SCN3A-210ENST00000640652 IGKV3D-7A0A0C4DH55 119 aa3.96□□□□□ -1.78
SCN3A-210ENST00000640652 SERP2Q8N6R1 65 aa3.96□□□□□ -1.78
SCN3A-210ENST00000640652 COX7CP15954 63 aa3.96□□□□□ -1.78
SCN3A-210ENST00000640652 RPL18AQ02543 176 aaKnown RBP3.96□□□□□ -1.78
SCN3A-210ENST00000640652 NCR3O14931 201 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 C1orf158Q8N1D5 194 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 KIR2DL5BQ8NHK3 375 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 LINC01600Q96MT4 127 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 UPK3BQ9BT76 320 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 A0A096LPF7 62 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 ZNF843Q8N446 348 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 NDUFC2O95298 119 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 FSHBP01225 129 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 LINC00959A0A1B0GUT2 108 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 WFDC11Q8NEX6 87 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 MIFP14174 115 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 DIRC1Q969H9 104 aa3.95□□□□□ -1.78
SCN3A-210ENST00000640652 Q8N814 137 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 SVIPQ8NHG7 77 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 LINC00526Q96FQ7 95 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 C16orf95Q9H693 158 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 KLK5Q9Y337 293 aaPredicted RBP3.94□□□□□ -1.78
SCN3A-210ENST00000640652 TENM1Q9UKZ4 2725 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 LINC01006Q8NI28 216 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 IGHV3OR16-9A0A0B4J2B5 98 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 HAMPP81172 84 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 FUSP35637 526 aaKnown RBP eCLIP3.94□□□□□ -1.78
SCN3A-210ENST00000640652 HILS1P60008 231 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 A0A087WYN8 130 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 FHL2Q14192 279 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 RMI2Q96E14 147 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 C1orf43Q9BWL3 253 aa3.94□□□□□ -1.78
SCN3A-210ENST00000640652 CCKP06307 115 aa3.93□□□□□ -1.78
SCN3A-210ENST00000640652 IL17DQ8TAD2 202 aa3.93□□□□□ -1.78
SCN3A-210ENST00000640652 CAMK2N2Q96S95 79 aa3.93□□□□□ -1.78
SCN3A-210ENST00000640652 WFDC10AQ9H1F0 79 aa3.93□□□□□ -1.78
SCN3A-210ENST00000640652 LOC100131303A0A0U1RQF7 123 aa3.93□□□□□ -1.78
SCN3A-210ENST00000640652 F8WEM9 126 aa3.93□□□□□ -1.78
SCN3A-210ENST00000640652 A0A096LNT2 108 aa3.93□□□□□ -1.78
SCN3A-210ENST00000640652 ATP5EP56381 51 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-210ENST00000640652 COX7BP24311 80 aa3.92□□□□□ -1.78
SCN3A-210ENST00000640652 NTM-AS1Q6ZSK4 140 aa3.92□□□□□ -1.78
SCN3A-210ENST00000640652 TRAV23DV6A0A075B6W5 121 aa3.92□□□□□ -1.78
SCN3A-210ENST00000640652 LELP1Q5T871 98 aa3.92□□□□□ -1.78
SCN3A-210ENST00000640652 NDUFC1O43677 76 aa3.92□□□□□ -1.78
SCN3A-210ENST00000640652 KLK12Q9UKR0 248 aa3.92□□□□□ -1.78
SCN3A-210ENST00000640652 USP17L23D6RBM5 183 aa3.92□□□□□ -1.78
SCN3A-210ENST00000640652 J3QKU1 62 aa3.91□□□□□ -1.78
SCN3A-210ENST00000640652 TENM4Q6N022 2769 aa3.91□□□□□ -1.78
SCN3A-210ENST00000640652 PKIGQ9Y2B9 76 aa3.91□□□□□ -1.78
SCN3A-210ENST00000640652 IGLV4-60A0A075B6I1 120 aa3.91□□□□□ -1.78
SCN3A-210ENST00000640652 NDUFC2-KCTD14E9PQ53 114 aa3.91□□□□□ -1.78
SCN3A-210ENST00000640652 Q9UF83 564 aa3.91□□□□□ -1.78
SCN3A-210ENST00000640652 ENHOQ6UWT2 76 aa3.91□□□□□ -1.78
SCN3A-210ENST00000640652 LY6G6DO95868 133 aa3.9□□□□□ -1.78
SCN3A-210ENST00000640652 C6orf99Q4VX62 202 aa3.9□□□□□ -1.78
SCN3A-210ENST00000640652 SOSTDC1Q6X4U4 206 aa3.9□□□□□ -1.78
SCN3A-210ENST00000640652 BBC3Q96PG8 261 aaPredicted RBP3.9□□□□□ -1.78
SCN3A-210ENST00000640652 ZNF73O43830 326 aaPredicted RBP3.9□□□□□ -1.79
SCN3A-210ENST00000640652 PDZD2O15018 2839 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms