RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 FAM213BQ8TBF2 198 aa1.56□□□□□ -2.16
RTTN-217ENST00000640393 TMEM254Q8TBM7 123 aa1.56□□□□□ -2.16
RTTN-217ENST00000640393 TRGV9Q99603 122 aa1.56□□□□□ -2.16
RTTN-217ENST00000640393 MRPL35Q9NZE8 188 aaKnown RBP1.56□□□□□ -2.16
RTTN-217ENST00000640393 UBR5O95071 2799 aaPredicted RBP1.56□□□□□ -2.16
RTTN-217ENST00000640393 UTP20O75691 2785 aaKnown RBP1.55□□□□□ -2.16
RTTN-217ENST00000640393 CELSR3Q9NYQ7 3312 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 TRBV6-5A0A0K0K1A5 114 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 A6NIN4 97 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 NDUFC1O43677 76 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 NUPR1O60356 82 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 CCKP06307 115 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 SNRPFP62306 86 aaKnown RBP1.55□□□□□ -2.16
RTTN-217ENST00000640393 CNBPP62633 177 aaKnown RBP1.55□□□□□ -2.16
RTTN-217ENST00000640393 RBM3P98179 157 aaKnown RBP1.55□□□□□ -2.16
RTTN-217ENST00000640393 SSBP1Q04837 148 aaKnown RBP1.55□□□□□ -2.16
RTTN-217ENST00000640393 WFDC2Q14508 124 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 RHOHQ15669 191 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 MPV17LQ2QL34 196 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 ETDBQ3ZM63 59 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 NMSQ5H8A3 153 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 S100A7L2Q5SY68 101 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 SERP2Q8N6R1 65 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 TMEM141Q96I45 108 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 NMES1Q9C002 83 aa1.55□□□□□ -2.16
RTTN-217ENST00000640393 ALPK2Q86TB3 2170 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 C2CD3Q4AC94 2353 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 COL12A1Q99715 3063 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 CHD3Q12873 2000 aaKnown RBP1.54□□□□□ -2.16
RTTN-217ENST00000640393 HEATR1Q9H583 2144 aaKnown RBP1.54□□□□□ -2.16
RTTN-217ENST00000640393 TRBV6-8A0A0A6YYG3 113 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 TRAV10A0A0B4J240 114 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 TRAV17A0A0B4J275 112 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 CRYM-AS1A6NIL9 109 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 E7EUB6 86 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 CXCL8P10145 99 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 COX8AP10176 69 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 DSCR4P56555 118 aaPredicted RBP1.54□□□□□ -2.16
RTTN-217ENST00000640393 RPL7L1Q6DKI1 246 aaKnown RBP1.54□□□□□ -2.16
RTTN-217ENST00000640393 SLC48A1Q6P1K1 146 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 LINC00269Q8N2A0 174 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 FAM19A2Q8N3H0 131 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 SMIM4Q8WVI0 70 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 AMELYQ99218 206 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 MANBALQ9NQG1 85 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 ABRACLQ9P1F3 81 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 HIGD1BQ9P298 99 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 NDUFA12Q9UI09 145 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 CNOT1A5YKK6 2376 aaKnown RBP1.54□□□□□ -2.16
RTTN-217ENST00000640393 NF1P21359 2839 aa1.54□□□□□ -2.16
RTTN-217ENST00000640393 KIAA1549Q9HCM3 1950 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 A0A087WSZ3 146 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 CCL16O15467 120 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 BCE1O60756 84 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 SMIM11AP58511 58 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 UBE2G1P62253 170 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 PDE6HQ13956 83 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 C1orf137Q5JT78 98 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 CFAP126Q5VTH2 177 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 BAGE3Q86Y29 109 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 BAGE2Q86Y30 109 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 Q8TAT8 98 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 CYP4F30PQ9H0H9 118 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 NXT2Q9NPJ8 142 aaKnown RBP1.53□□□□□ -2.16
RTTN-217ENST00000640393 POLQO75417 2590 aa1.53□□□□□ -2.16
RTTN-217ENST00000640393 INTS1Q8N201 2190 aaKnown RBP1.53□□□□□ -2.16
RTTN-217ENST00000640393 CITO14578 2027 aa1.52□□□□□ -2.17
RTTN-217ENST00000640393 MYH8P13535 1937 aa1.52□□□□□ -2.17
RTTN-217ENST00000640393 DOPEY2Q9Y3R5 2298 aa1.52□□□□□ -2.17
RTTN-217ENST00000640393 ARFGEF3Q5TH69 2177 aa1.52□□□□□ -2.17
RTTN-217ENST00000640393 TRBV10-3A0A0K0K1G6 114 aa1.52□□□□□ -2.17
RTTN-217ENST00000640393 ERC2-IT1O76042 136 aa1.52□□□□□ -2.17
RTTN-217ENST00000640393 C3orf79P0CE67 100 aa1.52□□□□□ -2.17
RTTN-217ENST00000640393 C9orf116Q5BN46 136 aaPredicted RBP1.52□□□□□ -2.17
RTTN-217ENST00000640393 CYP2G1PQ6ZSU1 146 aa1.52□□□□□ -2.17
RTTN-217ENST00000640393 LINC00643Q86TS7 51 aa1.52□□□□□ -2.17
RTTN-217ENST00000640393 PPP1R1CQ8WVI7 109 aa1.52□□□□□ -2.17
RTTN-217ENST00000640393 EML5Q05BV3 1969 aa1.52□□□□□ -2.17
RTTN-217ENST00000640393 ANK1P16157 1881 aa1.52□□□□□ -2.17
RTTN-217ENST00000640393 SPENQ96T58 3664 aaKnown RBP1.52□□□□□ -2.17
RTTN-217ENST00000640393 HELZP42694 1942 aaKnown RBP1.52□□□□□ -2.17
RTTN-217ENST00000640393 CSMD1Q96PZ7 3565 aa1.51□□□□□ -2.17
RTTN-217ENST00000640393 TNRC6AQ8NDV7 1962 aaKnown RBP1.51□□□□□ -2.17
RTTN-217ENST00000640393 SPTAN1Q13813 2472 aaKnown RBP1.51□□□□□ -2.17
RTTN-217ENST00000640393 PDCD11Q14690 1871 aaKnown RBP1.51□□□□□ -2.17
RTTN-217ENST00000640393 TRAV13-2A0A0B4J235 113 aa1.51□□□□□ -2.17
RTTN-217ENST00000640393 F2Z2F3 143 aa1.51□□□□□ -2.17
RTTN-217ENST00000640393 KRTAP10-4P60372 401 aaPredicted RBP1.51□□□□□ -2.17
RTTN-217ENST00000640393 SNRPGP62308 76 aaKnown RBP1.51□□□□□ -2.17
RTTN-217ENST00000640393 TMEM170BQ5T4T1 132 aa1.51□□□□□ -2.17
RTTN-217ENST00000640393 C2orf82Q6UX34 121 aa1.51□□□□□ -2.17
RTTN-217ENST00000640393 DYNLRB1Q9NP97 96 aa1.51□□□□□ -2.17
RTTN-217ENST00000640393 CREBBPQ92793 2442 aa1.51□□□□□ -2.17
RTTN-217ENST00000640393 LAMA1P25391 3075 aa1.51□□□□□ -2.17
RTTN-217ENST00000640393 POLEQ07864 2286 aa1.51□□□□□ -2.17
RTTN-217ENST00000640393 SPTA1P02549 2419 aa1.51□□□□□ -2.17
RTTN-217ENST00000640393 ZFHX3Q15911 3703 aa1.5□□□□□ -2.17
RTTN-217ENST00000640393 OTOGQ6ZRI0 2925 aa1.5□□□□□ -2.17
RTTN-217ENST00000640393 TRBV7-1A0A0A6YYK4 115 aa1.5□□□□□ -2.17
RTTN-217ENST00000640393 TRAV1-2A0A0B4J238 106 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms