RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	LINC00526	Q96FQ7	95 aa		7	□□□□□ -1.29
NECAP1-223	ENST00000640091	C1orf43	Q9BWL3	253 aa		7	□□□□□ -1.29
NECAP1-223	ENST00000640091	KRTAP1-5	Q9BYS1	174 aa		7	□□□□□ -1.29
NECAP1-223	ENST00000640091	HIGD1B	Q9P298	99 aa		7	□□□□□ -1.29
NECAP1-223	ENST00000640091	DNAH1	Q9P2D7	4330 aa		6.99	□□□□□ -1.29
NECAP1-223	ENST00000640091		A0A0U1RRA0	63 aa		6.99	□□□□□ -1.29
NECAP1-223	ENST00000640091		A0A1W2PPM0	123 aa		6.99	□□□□□ -1.29
NECAP1-223	ENST00000640091	HSD52	Q0P140	79 aa		6.99	□□□□□ -1.29
NECAP1-223	ENST00000640091	SIGMAR1	Q99720	223 aa		6.99	□□□□□ -1.29
NECAP1-223	ENST00000640091		A6NJY4	79 aa		6.98	□□□□□ -1.29
NECAP1-223	ENST00000640091		H3BUT2	72 aa		6.98	□□□□□ -1.29
NECAP1-223	ENST00000640091	NDUFA1	O15239	70 aa		6.98	□□□□□ -1.29
NECAP1-223	ENST00000640091	C2orf82	Q6UX34	121 aa		6.98	□□□□□ -1.29
NECAP1-223	ENST00000640091	WWC2-AS2	Q96NR7	200 aa		6.98	□□□□□ -1.29
NECAP1-223	ENST00000640091	HIST1H4G	Q99525	98 aa		6.98	□□□□□ -1.29
NECAP1-223	ENST00000640091	PRSS2	P07478	247 aa		6.98	□□□□□ -1.29
NECAP1-223	ENST00000640091	SRSF9	Q13242	221 aa	Known RBP eCLIP	6.98	□□□□□ -1.29
NECAP1-223	ENST00000640091	ADAMTSL4-AS1	Q5T5F5	129 aa		6.98	□□□□□ -1.29
NECAP1-223	ENST00000640091	GCSH	P23434	173 aa		6.97	□□□□□ -1.29
NECAP1-223	ENST00000640091	KIAA0087	Q14695	138 aa		6.97	□□□□□ -1.29
NECAP1-223	ENST00000640091	SPCS1	Q9Y6A9	102 aa		6.97	□□□□□ -1.29
NECAP1-223	ENST00000640091	LINC01561	Q8N1V8	128 aa		6.97	□□□□□ -1.29
NECAP1-223	ENST00000640091	C6orf223	Q8N319	242 aa		6.97	□□□□□ -1.29
NECAP1-223	ENST00000640091	DAND5	Q8N907	189 aa		6.97	□□□□□ -1.29
NECAP1-223	ENST00000640091	CASC10	Q5T4H9	136 aa		6.96	□□□□□ -1.3
NECAP1-223	ENST00000640091		Q8IZM0	81 aa		6.96	□□□□□ -1.3
NECAP1-223	ENST00000640091	LITAF	Q99732	161 aa		6.96	□□□□□ -1.3
NECAP1-223	ENST00000640091	APOM	O95445	188 aa		6.95	□□□□□ -1.3
NECAP1-223	ENST00000640091	CKS1B	P61024	79 aa		6.95	□□□□□ -1.3
NECAP1-223	ENST00000640091	NPC2	P61916	151 aa		6.95	□□□□□ -1.3
NECAP1-223	ENST00000640091	HIGD2B	Q4VC39	106 aa		6.95	□□□□□ -1.3
NECAP1-223	ENST00000640091	FXYD2	P54710	66 aa		6.95	□□□□□ -1.3
NECAP1-223	ENST00000640091	MEIG1	Q5JSS6	88 aa		6.95	□□□□□ -1.3
NECAP1-223	ENST00000640091	CFAP161	Q6P656	301 aa		6.95	□□□□□ -1.3
NECAP1-223	ENST00000640091	CEND1	Q8N111	149 aa		6.95	□□□□□ -1.3
NECAP1-223	ENST00000640091		M0R2N4	97 aa		6.94	□□□□□ -1.3
NECAP1-223	ENST00000640091	SMIM13	P0DJ93	91 aa		6.94	□□□□□ -1.3
NECAP1-223	ENST00000640091	SPAG11B	Q08648	103 aa		6.94	□□□□□ -1.3
NECAP1-223	ENST00000640091	FABP2	P12104	132 aa		6.94	□□□□□ -1.3
NECAP1-223	ENST00000640091	PFN2	P35080	140 aa		6.94	□□□□□ -1.3
NECAP1-223	ENST00000640091	HERV-K104	P63124	156 aa		6.94	□□□□□ -1.3
NECAP1-223	ENST00000640091	C10orf25	Q5T742	122 aa		6.94	□□□□□ -1.3
NECAP1-223	ENST00000640091	C15orf56	Q8N910	161 aa		6.94	□□□□□ -1.3
NECAP1-223	ENST00000640091	DNAH10	Q8IVF4	4471 aa		6.93	□□□□□ -1.3
NECAP1-223	ENST00000640091	NBDY	A0A0U1RRE5	68 aa		6.93	□□□□□ -1.3
NECAP1-223	ENST00000640091	LECT2	O14960	151 aa		6.93	□□□□□ -1.3
NECAP1-223	ENST00000640091	EIF4EBP3	O60516	100 aa	Predicted RBP	6.93	□□□□□ -1.3
NECAP1-223	ENST00000640091	CIRBP	Q14011	172 aa	Known RBP	6.93	□□□□□ -1.3
NECAP1-223	ENST00000640091	C9orf116	Q5BN46	136 aa	Predicted RBP	6.93	□□□□□ -1.3
NECAP1-223	ENST00000640091	UNQ6190/PRO20217	Q6UXQ8	127 aa		6.93	□□□□□ -1.3
NECAP1-223	ENST00000640091	MUSTN1	Q8IVN3	82 aa		6.93	□□□□□ -1.3
NECAP1-223	ENST00000640091	TM2D2	Q9BX73	214 aa		6.93	□□□□□ -1.3
NECAP1-223	ENST00000640091	SPANXB1	Q9NS25	103 aa	Predicted RBP	6.93	□□□□□ -1.3
NECAP1-223	ENST00000640091	ZNF561-AS1	K7EIQ3	104 aa		6.92	□□□□□ -1.3
NECAP1-223	ENST00000640091	TAL2	Q16559	108 aa		6.92	□□□□□ -1.3
NECAP1-223	ENST00000640091	NAA38	Q9BRA0	125 aa	Known RBP	6.92	□□□□□ -1.3
NECAP1-223	ENST00000640091	KMT2A	Q03164	3969 aa		6.92	□□□□□ -1.3
NECAP1-223	ENST00000640091		F8W1H4	67 aa		6.92	□□□□□ -1.3
NECAP1-223	ENST00000640091		J3QR89	54 aa		6.92	□□□□□ -1.3
NECAP1-223	ENST00000640091	RMI2	Q96E14	147 aa		6.92	□□□□□ -1.3
NECAP1-223	ENST00000640091	TSPAN13	O95857	204 aa		6.91	□□□□□ -1.3
NECAP1-223	ENST00000640091	LY6G6C	O95867	125 aa		6.91	□□□□□ -1.3
NECAP1-223	ENST00000640091	LINC00158	P58513	81 aa		6.91	□□□□□ -1.3
NECAP1-223	ENST00000640091	RPL24	P83731	157 aa	Known RBP	6.91	□□□□□ -1.3
NECAP1-223	ENST00000640091	NTN5	Q8WTR8	489 aa	Predicted RBP	6.91	□□□□□ -1.3
NECAP1-223	ENST00000640091	VPS13D	Q5THJ4	4388 aa		6.91	□□□□□ -1.3
NECAP1-223	ENST00000640091	MTURN	Q8N3F0	131 aa		6.91	□□□□□ -1.3
NECAP1-223	ENST00000640091	NHP2	Q9NX24	153 aa	Known RBP	6.91	□□□□□ -1.3
NECAP1-223	ENST00000640091	ERG28	Q9UKR5	140 aa		6.91	□□□□□ -1.3
NECAP1-223	ENST00000640091	TIMM17B	O60830	172 aa		6.9	□□□□□ -1.3
NECAP1-223	ENST00000640091	MIR7-3HG	Q8N6C7	128 aa		6.9	□□□□□ -1.3
NECAP1-223	ENST00000640091	USP17L23	D6RBM5	183 aa		6.89	□□□□□ -1.31
NECAP1-223	ENST00000640091		K7ERJ3	54 aa		6.89	□□□□□ -1.31
NECAP1-223	ENST00000640091	PSCA	O43653	123 aa		6.89	□□□□□ -1.31
NECAP1-223	ENST00000640091	CXCL5	P42830	114 aa		6.89	□□□□□ -1.31
NECAP1-223	ENST00000640091	RAB37	Q96AX2	223 aa		6.89	□□□□□ -1.31
NECAP1-223	ENST00000640091	CAMK2N2	Q96S95	79 aa		6.89	□□□□□ -1.31
NECAP1-223	ENST00000640091	SPANXD	Q9BXN6	97 aa		6.89	□□□□□ -1.31
NECAP1-223	ENST00000640091	SPANXC	Q9NY87	97 aa		6.89	□□□□□ -1.31
NECAP1-223	ENST00000640091		A4D1N5	150 aa		6.89	□□□□□ -1.31
NECAP1-223	ENST00000640091	WFDC2	Q14508	124 aa		6.89	□□□□□ -1.31
NECAP1-223	ENST00000640091	TTC32	Q5I0X7	151 aa		6.89	□□□□□ -1.31
NECAP1-223	ENST00000640091	SFTA2	Q6UW10	78 aa		6.89	□□□□□ -1.31
NECAP1-223	ENST00000640091	SOSTDC1	Q6X4U4	206 aa		6.88	□□□□□ -1.31
NECAP1-223	ENST00000640091	LINC00308	Q8TCZ7	52 aa		6.88	□□□□□ -1.31
NECAP1-223	ENST00000640091	C6orf48	Q9UBA6	75 aa		6.88	□□□□□ -1.31
NECAP1-223	ENST00000640091	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.88	□□□□□ -1.31
NECAP1-223	ENST00000640091	C3orf84	H3BNL1	204 aa		6.88	□□□□□ -1.31
NECAP1-223	ENST00000640091		Q6ZRU5	148 aa		6.88	□□□□□ -1.31
NECAP1-223	ENST00000640091	PRO0461	Q9UI25	63 aa		6.88	□□□□□ -1.31
NECAP1-223	ENST00000640091	SLPI	P03973	132 aa		6.87	□□□□□ -1.31
NECAP1-223	ENST00000640091	PGPEP1	Q9NXJ5	209 aa		6.86	□□□□□ -1.31
NECAP1-223	ENST00000640091	CFC1B	P0CG36	223 aa		6.86	□□□□□ -1.31
NECAP1-223	ENST00000640091	CFC1	P0CG37	223 aa		6.86	□□□□□ -1.31
NECAP1-223	ENST00000640091	LINC00476	Q8WZB0	136 aa		6.86	□□□□□ -1.31
NECAP1-223	ENST00000640091	IFITM1	P13164	125 aa		6.85	□□□□□ -1.31
NECAP1-223	ENST00000640091	C2orf48	Q96LS8	159 aa		6.85	□□□□□ -1.31
NECAP1-223	ENST00000640091	SYCN	Q0VAF6	134 aa		6.85	□□□□□ -1.31
NECAP1-223	ENST00000640091	COX17	Q14061	63 aa		6.85	□□□□□ -1.31
NECAP1-223	ENST00000640091		Q6ZR54	194 aa		6.85	□□□□□ -1.31

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