RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 IGKV2D-28P01615 120 aa13.07□□□□□ -0.32
CROCCP2-206ENST00000639594 LINC00337Q8N6G1 96 aa13.07□□□□□ -0.32
CROCCP2-206ENST00000639594 C11orf68Q9H3H3 251 aaKnown RBP13.07□□□□□ -0.32
CROCCP2-206ENST00000639594 STAB1Q9NY15 2570 aa13.07□□□□□ -0.32
CROCCP2-206ENST00000639594 IBA57-AS1B1ANH7 110 aa13.07□□□□□ -0.32
CROCCP2-206ENST00000639594 PFN2P35080 140 aa13.07□□□□□ -0.32
CROCCP2-206ENST00000639594 APOC4P55056 127 aa13.07□□□□□ -0.32
CROCCP2-206ENST00000639594 TRAV13-2A0A0B4J235 113 aa13.06□□□□□ -0.32
CROCCP2-206ENST00000639594 TRAV8-4A0A0B4J246 113 aa13.06□□□□□ -0.32
CROCCP2-206ENST00000639594 CCL18P55774 89 aa13.06□□□□□ -0.32
CROCCP2-206ENST00000639594 KRTAP24-1Q3LI83 254 aa13.06□□□□□ -0.32
CROCCP2-206ENST00000639594 CRPP02741 224 aa13.05□□□□□ -0.32
CROCCP2-206ENST00000639594 C6orf226Q5I0X4 101 aa13.05□□□□□ -0.32
CROCCP2-206ENST00000639594 DAD1P61803 113 aa13.04□□□□□ -0.32
CROCCP2-206ENST00000639594 FAM218AQ96MZ4 157 aa13.04□□□□□ -0.32
CROCCP2-206ENST00000639594 CELA1Q9UNI1 258 aa13.04□□□□□ -0.32
CROCCP2-206ENST00000639594 RPL28P46779 137 aaKnown RBP13.03□□□□□ -0.32
CROCCP2-206ENST00000639594 Q8N3U1 123 aa13.03□□□□□ -0.32
CROCCP2-206ENST00000639594 DEFB121Q5J5C9 76 aa13.02□□□□□ -0.33
CROCCP2-206ENST00000639594 LINC00269Q8N2A0 174 aa13.02□□□□□ -0.33
CROCCP2-206ENST00000639594 Q8NAQ8 132 aa13.02□□□□□ -0.33
CROCCP2-206ENST00000639594 TRACP01848 142 aa13.01□□□□□ -0.33
CROCCP2-206ENST00000639594 TRAV26-1A0A087WT03 109 aa13□□□□□ -0.33
CROCCP2-206ENST00000639594 Q8IZM0 81 aa13□□□□□ -0.33
CROCCP2-206ENST00000639594 SMIM11BQ8TCY0 68 aa12.99□□□□□ -0.33
CROCCP2-206ENST00000639594 ATP5G1P05496 136 aa12.98□□□□□ -0.33
CROCCP2-206ENST00000639594 MIFP14174 115 aa12.98□□□□□ -0.33
CROCCP2-206ENST00000639594 ANGP03950 147 aaKnown RBP12.98□□□□□ -0.33
CROCCP2-206ENST00000639594 CKS1BP61024 79 aa12.98□□□□□ -0.33
CROCCP2-206ENST00000639594 LINC01561Q8N1V8 128 aa12.98□□□□□ -0.33
CROCCP2-206ENST00000639594 COL6A5A8TX70 2615 aa12.97□□□□□ -0.33
CROCCP2-206ENST00000639594 IGLV10-54A0A075B6I4 117 aa12.97□□□□□ -0.33
CROCCP2-206ENST00000639594 BAALC-AS2P0C853 105 aa12.97□□□□□ -0.33
CROCCP2-206ENST00000639594 CHCHD10Q8WYQ3 142 aaPredicted RBP12.97□□□□□ -0.33
CROCCP2-206ENST00000639594 IGHV4-30-4P0DP06 118 aa12.96□□□□□ -0.33
CROCCP2-206ENST00000639594 HTN3P15516 51 aa12.96□□□□□ -0.33
CROCCP2-206ENST00000639594 CD164L2Q6UWJ8 174 aa12.96□□□□□ -0.33
CROCCP2-206ENST00000639594 WFDC9Q8NEX5 89 aa12.96□□□□□ -0.33
CROCCP2-206ENST00000639594 A0A1B0GV72 72 aa12.96□□□□□ -0.34
CROCCP2-206ENST00000639594 REG3AQ06141 175 aa12.96□□□□□ -0.34
CROCCP2-206ENST00000639594 PKD1L1Q8TDX9 2849 aa12.95□□□□□ -0.34
CROCCP2-206ENST00000639594 SPART-AS1P0CW21 52 aa12.95□□□□□ -0.34
CROCCP2-206ENST00000639594 KIAA0087Q14695 138 aa12.95□□□□□ -0.34
CROCCP2-206ENST00000639594 Q9HAA7 133 aa12.95□□□□□ -0.34
CROCCP2-206ENST00000639594 C22orf24Q9Y442 160 aa12.95□□□□□ -0.34
CROCCP2-206ENST00000639594 SNCGO76070 127 aa12.94□□□□□ -0.34
CROCCP2-206ENST00000639594 C15orf53Q8NAA6 179 aa12.94□□□□□ -0.34
CROCCP2-206ENST00000639594 OR13C6PQ8NH95 151 aa12.93□□□□□ -0.34
CROCCP2-206ENST00000639594 CMYA5Q8N3K9 4069 aa12.92□□□□□ -0.34
CROCCP2-206ENST00000639594 A0A087WYN8 130 aa12.92□□□□□ -0.34
CROCCP2-206ENST00000639594 FAM240AA0A1B0GVK7 77 aa12.92□□□□□ -0.34
CROCCP2-206ENST00000639594 MRPL23Q16540 153 aaKnown RBP12.92□□□□□ -0.34
CROCCP2-206ENST00000639594 WIPF1O43516 503 aa12.91□□□□□ -0.34
CROCCP2-206ENST00000639594 MALP21145 153 aa12.9□□□□□ -0.34
CROCCP2-206ENST00000639594 CFAP161Q6P656 301 aa12.9□□□□□ -0.34
CROCCP2-206ENST00000639594 TTC32Q5I0X7 151 aa12.9□□□□□ -0.34
CROCCP2-206ENST00000639594 LELP1Q5T871 98 aa12.89□□□□□ -0.35
CROCCP2-206ENST00000639594 H0YGX0 51 aa12.88□□□□□ -0.35
CROCCP2-206ENST00000639594 GAGE2BQ13066 116 aa12.88□□□□□ -0.35
CROCCP2-206ENST00000639594 GAGE2EQ4V326 116 aa12.88□□□□□ -0.35
CROCCP2-206ENST00000639594 GAGE2DQ9UEU5 116 aa12.88□□□□□ -0.35
CROCCP2-206ENST00000639594 CXCL5P42830 114 aa12.87□□□□□ -0.35
CROCCP2-206ENST00000639594 PRR3P79522 188 aaKnown RBP12.87□□□□□ -0.35
CROCCP2-206ENST00000639594 C9orf116Q5BN46 136 aaPredicted RBP12.87□□□□□ -0.35
CROCCP2-206ENST00000639594 C3orf56Q8N813 242 aa12.87□□□□□ -0.35
CROCCP2-206ENST00000639594 DNAL4O96015 105 aa12.86□□□□□ -0.35
CROCCP2-206ENST00000639594 COX17Q14061 63 aa12.86□□□□□ -0.35
CROCCP2-206ENST00000639594 LECT2O14960 151 aa12.84□□□□□ -0.35
CROCCP2-206ENST00000639594 OXLD1Q5BKU9 147 aa12.84□□□□□ -0.35
CROCCP2-206ENST00000639594 KLK12Q9UKR0 248 aa12.84□□□□□ -0.35
CROCCP2-206ENST00000639594 Q6Q795 121 aa12.83□□□□□ -0.36
CROCCP2-206ENST00000639594 ACYP1P07311 99 aa12.83□□□□□ -0.36
CROCCP2-206ENST00000639594 NANOS2P60321 138 aaKnown RBP12.83□□□□□ -0.36
CROCCP2-206ENST00000639594 C6orf223Q8N319 242 aa12.83□□□□□ -0.36
CROCCP2-206ENST00000639594 RETNQ9HD89 108 aa12.82□□□□□ -0.36
CROCCP2-206ENST00000639594 KLK5Q9Y337 293 aaPredicted RBP12.82□□□□□ -0.36
CROCCP2-206ENST00000639594 C10orf25Q5T742 122 aa12.81□□□□□ -0.36
CROCCP2-206ENST00000639594 LYPD5Q6UWN5 251 aa12.81□□□□□ -0.36
CROCCP2-206ENST00000639594 PRR34Q9NV39 138 aa12.81□□□□□ -0.36
CROCCP2-206ENST00000639594 NDUFC2O95298 119 aa12.81□□□□□ -0.36
CROCCP2-206ENST00000639594 KRTAP10-11P60412 298 aa12.81□□□□□ -0.36
CROCCP2-206ENST00000639594 C9orf129Q5T035 196 aaKnown RBP12.81□□□□□ -0.36
CROCCP2-206ENST00000639594 ENHOQ6UWT2 76 aa12.81□□□□□ -0.36
CROCCP2-206ENST00000639594 LINC00526Q96FQ7 95 aa12.81□□□□□ -0.36
CROCCP2-206ENST00000639594 ANAPC13Q9BS18 74 aa12.81□□□□□ -0.36
CROCCP2-206ENST00000639594 SPAG11BQ08648 103 aa12.8□□□□□ -0.36
CROCCP2-206ENST00000639594 UNQ6190/PRO20217Q6UXQ8 127 aa12.8□□□□□ -0.36
CROCCP2-206ENST00000639594 SLPIP03973 132 aa12.8□□□□□ -0.36
CROCCP2-206ENST00000639594 Q8NDZ9 215 aa12.8□□□□□ -0.36
CROCCP2-206ENST00000639594 INAFM2P0DMQ5 153 aa12.79□□□□□ -0.36
CROCCP2-206ENST00000639594 SMCR5Q8TEV8 140 aa12.79□□□□□ -0.36
CROCCP2-206ENST00000639594 NDUFV3P56181 108 aaKnown RBP12.78□□□□□ -0.36
CROCCP2-206ENST00000639594 NHLRC4P0CG21 123 aaPredicted RBP12.77□□□□□ -0.36
CROCCP2-206ENST00000639594 ANK2Q01484 3957 aa12.77□□□□□ -0.37
CROCCP2-206ENST00000639594 NCR3O14931 201 aa12.76□□□□□ -0.37
CROCCP2-206ENST00000639594 GAGE2AQ6NT46 116 aa12.76□□□□□ -0.37
CROCCP2-206ENST00000639594 TMEM126AQ9H061 195 aa12.76□□□□□ -0.37
CROCCP2-206ENST00000639594 NOTCH1P46531 2555 aa12.75□□□□□ -0.37
CROCCP2-206ENST00000639594 TRBV7-7A0A0K0K1E9 115 aa12.74□□□□□ -0.37
CROCCP2-206ENST00000639594 KPRPQ5T749 579 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms