RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 TRBV20-1A0A075B6N2 111 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 TRAV13-2A0A0B4J235 113 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 A0A1B0GX51 115 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 H0Y9P7 68 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 CHKB-CPT1BH3BT56 60 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 H3BUA1 57 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 GABARAPH6UMI1 98 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 M0QX08 132 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 HMGN4O00479 90 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 CETN3O15182 167 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 NDUFC1O43677 76 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 NDUFB6O95139 128 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 SLC25A5P05141 298 aaKnown RBP-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 CSN2P05814 226 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 SAA2P0DJI9 122 aaPredicted RBP-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 SERPINB1P30740 379 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 S100A11P31949 105 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 RPL22P35268 128 aaKnown RBP-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 GNG5P63218 68 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 TPM4P67936 248 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 MRPS10P82664 201 aaKnown RBP-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 WT1-ASQ06250 92 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 SMIM21Q3B7S5 101 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 BVES-AS1Q5T3Y7 98 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 OGFRL1Q5TC84 451 aaPredicted RBP-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 SFTA2Q6UW10 78 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 DEFB107AQ8IZN7 70 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 FAM9CQ8IZT9 166 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 TSLPQ969D9 159 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 LLPHQ9BRT6 129 aaKnown RBP-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 VAMP8Q9BV40 100 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 SH3BGRL3Q9H299 93 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 SAR1AQ9NR31 198 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 CALML5Q9NZT1 146 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 UQCR10Q9UDW1 63 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 SS18L2Q9UHA2 77 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 SSR3Q9UNL2 185 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 ARL2BPQ9Y2Y0 163 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 FAM32AQ9Y421 112 aaKnown RBP-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 ATP10BO94823 1461 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 GRIN2AQ12879 1464 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 PLEKHH2Q8IVE3 1493 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 NEO1Q92859 1461 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 MBD5Q9P267 1494 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 KDM5AP29375 1690 aaKnown RBP-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 FER1L6Q2WGJ9 1857 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 VCANP13611 3396 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 IFT172Q9UG01 1749 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 LRP5O75197 1615 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 HECW1Q76N89 1606 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 DLC1Q96QB1 1528 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 WDFY4Q6ZS81 3184 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 UHRF1BP1LA0JNW5 1464 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 A2ML1A8K2U0 1454 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 NCAPD3P42695 1498 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 C1orf167Q5SNV9 1468 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 SNAPC4Q5SXM2 1469 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 TEX14Q8IWB6 1497 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 PLIN4Q96Q06 1357 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 ANKRD30AQ9BXX3 1397 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 C20orf202A1L168 122 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 TMEM218A2RU14 115 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 C7orf77A4D0Y5 90 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 LYNX1G3V0Z9 82 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 TSTD3H0UI37 97 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 M0R129 80 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 PFDN1O60925 122 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 LEPROTL1O95214 131 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 TCRAP04437 139 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 PAEPP09466 180 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 HIST1H1EP10412 219 aaKnown RBP-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 HSPE1P61604 102 aaKnown RBP-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 NCS1P62166 190 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 SPA17Q15506 151 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 CCDC58Q4VC31 144 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 LIN52Q52LA3 116 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 Q56UQ5 140 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 MIC13Q5XKP0 118 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 TMED4Q7Z7H5 227 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 TCTE3Q8IZS6 198 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 FAM24BQ8N5W8 94 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 OR9Q1Q8NGQ5 310 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 DYDC1Q8WWB3 177 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 ANP32BQ92688 251 aaKnown RBP-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 ARL11Q969Q4 196 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 TCEAL4Q96EI5 215 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 CFAP53Q96M91 514 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 GAFA1Q96PS6 74 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 C12orf57Q99622 126 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 CCDC32Q9BV29 185 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 BANF2Q9H503 90 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 MANBALQ9NQG1 85 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 CBLN4Q9NTU7 201 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 LYRM2Q9NU23 88 aaPredicted RBP-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 PRNDQ9UKY0 176 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 TRAPPC2LQ9UL33 140 aa-0.39□□□□□ -2.47
CCDC7-211ENST00000638889 DNAJC15Q9Y5T4 150 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms