RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 GAGE2BQ13066 116 aa5.99□□□□□ -1.45
SCARB2-214ENST00000638843 PAPPA-AS1Q5QFB9 102 aa5.99□□□□□ -1.45
SCARB2-214ENST00000638843 UNQ6190/PRO20217Q6UXQ8 127 aa5.99□□□□□ -1.45
SCARB2-214ENST00000638843 FA2HQ7L5A8 372 aa5.99□□□□□ -1.45
SCARB2-214ENST00000638843 FAM19A3Q7Z5A8 133 aa5.99□□□□□ -1.45
SCARB2-214ENST00000638843 C18orf32Q8TCD1 76 aa5.99□□□□□ -1.45
SCARB2-214ENST00000638843 URB1-AS1Q96HZ7 61 aa5.99□□□□□ -1.45
SCARB2-214ENST00000638843 LINC00474Q9P2X8 69 aa5.99□□□□□ -1.45
SCARB2-214ENST00000638843 LOC107984640A0A0U1RRK4 108 aa5.98□□□□□ -1.45
SCARB2-214ENST00000638843 MRPL35Q9NZE8 188 aaKnown RBP5.98□□□□□ -1.45
SCARB2-214ENST00000638843 A0A096LNJ9 63 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 NDUFA1O15239 70 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 RNF151Q2KHN1 245 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 C2orf82Q6UX34 121 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 CBLN2Q8IUK8 224 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 LINC01561Q8N1V8 128 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 SMCO4Q9NRQ5 59 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 CDKN2A-AS1Q9UH64 79 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 PKIGQ9Y2B9 76 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 PKHD1L1Q86WI1 4243 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 A0A1W2PNN7 141 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 F8WDY8 70 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 LINC00614P0C842 121 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 HERVK_113P63121 156 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 RPL18AQ02543 176 aaKnown RBP5.97□□□□□ -1.45
SCARB2-214ENST00000638843 CST9LQ9H4G1 147 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 C6orf48Q9UBA6 75 aa5.97□□□□□ -1.45
SCARB2-214ENST00000638843 LINC01549A6NIU2 74 aa5.96□□□□□ -1.46
SCARB2-214ENST00000638843 SEC11AP67812 179 aa5.96□□□□□ -1.46
SCARB2-214ENST00000638843 PMCHL1Q16048 86 aa5.96□□□□□ -1.46
SCARB2-214ENST00000638843 GEMIN7Q9H840 131 aaKnown RBP5.96□□□□□ -1.46
SCARB2-214ENST00000638843 Q6ZRP5 223 aa5.95□□□□□ -1.46
SCARB2-214ENST00000638843 C7orf33Q8WU49 177 aa5.95□□□□□ -1.46
SCARB2-214ENST00000638843 TINCRA0A1B0GVN0 87 aa5.94□□□□□ -1.46
SCARB2-214ENST00000638843 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
SCARB2-214ENST00000638843 PMVKQ15126 192 aa5.94□□□□□ -1.46
SCARB2-214ENST00000638843 C9orf116Q5BN46 136 aaPredicted RBP5.94□□□□□ -1.46
SCARB2-214ENST00000638843 LINC00469Q8N7U9 141 aa5.94□□□□□ -1.46
SCARB2-214ENST00000638843 TOMM7Q9P0U1 55 aa5.94□□□□□ -1.46
SCARB2-214ENST00000638843 IGLV5-45A0A087WSX0 123 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 TRBV30A0A0K0K1B3 111 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 HBDP02042 147 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 TLX1NBP0CAT3 122 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 GAGE2EQ4V326 116 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 C6orf226Q5I0X4 101 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 Q8IZM0 81 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 PACRGQ96M98 296 aaPredicted RBP5.93□□□□□ -1.46
SCARB2-214ENST00000638843 GAGE2DQ9UEU5 116 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 FAM168BA1KXE4 195 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 SMIM1B2RUZ4 78 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 PRSS2P07478 247 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 RAB5BP61020 215 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 PRR3P79522 188 aaKnown RBP5.93□□□□□ -1.46
SCARB2-214ENST00000638843 PDZD11Q5EBL8 140 aa5.93□□□□□ -1.46
SCARB2-214ENST00000638843 NDUFC2-KCTD14E9PQ53 114 aa5.92□□□□□ -1.46
SCARB2-214ENST00000638843 NDUFA6P56556 154 aa5.92□□□□□ -1.46
SCARB2-214ENST00000638843 CKS1BP61024 79 aa5.92□□□□□ -1.46
SCARB2-214ENST00000638843 TRGC2P03986 189 aa5.91□□□□□ -1.46
SCARB2-214ENST00000638843 SPINK8P0C7L1 97 aa5.91□□□□□ -1.46
SCARB2-214ENST00000638843 KRTAP7-1Q8IUC3 87 aa5.91□□□□□ -1.46
SCARB2-214ENST00000638843 OXTP01178 125 aa5.9□□□□□ -1.46
SCARB2-214ENST00000638843 IGLC3P0DOY3 106 aa5.9□□□□□ -1.46
SCARB2-214ENST00000638843 C9orf129Q5T035 196 aaKnown RBP5.9□□□□□ -1.46
SCARB2-214ENST00000638843 PHF5AQ7RTV0 110 aaKnown RBP5.9□□□□□ -1.46
SCARB2-214ENST00000638843 COLCA2A8K830 154 aa5.89□□□□□ -1.47
SCARB2-214ENST00000638843 F8VRH5 84 aa5.89□□□□□ -1.47
SCARB2-214ENST00000638843 ATP5LO75964 103 aa5.89□□□□□ -1.47
SCARB2-214ENST00000638843 BAGE3Q86Y29 109 aa5.89□□□□□ -1.47
SCARB2-214ENST00000638843 COX7B2Q8TF08 81 aa5.89□□□□□ -1.47
SCARB2-214ENST00000638843 CHCHD1Q96BP2 118 aaKnown RBP5.89□□□□□ -1.47
SCARB2-214ENST00000638843 TNXBP22105 4242 aa5.89□□□□□ -1.47
SCARB2-214ENST00000638843 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
SCARB2-214ENST00000638843 FAM19A5Q7Z5A7 132 aaPredicted RBP5.89□□□□□ -1.47
SCARB2-214ENST00000638843 IGLV5-39A0A0G2JS06 123 aa5.88□□□□□ -1.47
SCARB2-214ENST00000638843 H3BRM9 83 aa5.88□□□□□ -1.47
SCARB2-214ENST00000638843 ZNF22P17026 224 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-214ENST00000638843 CXCL5P42830 114 aa5.88□□□□□ -1.47
SCARB2-214ENST00000638843 KRTAP11-1Q8IUC1 163 aa5.88□□□□□ -1.47
SCARB2-214ENST00000638843 FAM19A2Q8N3H0 131 aa5.88□□□□□ -1.47
SCARB2-214ENST00000638843 XAGE1AQ9HD64 81 aa5.88□□□□□ -1.47
SCARB2-214ENST00000638843 PSORS1C2Q9UIG4 136 aa5.88□□□□□ -1.47
SCARB2-214ENST00000638843 C11orf86A6NJI1 115 aa5.87□□□□□ -1.47
SCARB2-214ENST00000638843 LINC00310P59036 64 aa5.87□□□□□ -1.47
SCARB2-214ENST00000638843 SRSF9Q13242 221 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCARB2-214ENST00000638843 HSBP1O75506 76 aa5.86□□□□□ -1.47
SCARB2-214ENST00000638843 SCO1O75880 301 aa5.86□□□□□ -1.47
SCARB2-214ENST00000638843 IFI27L1Q96BM0 104 aa5.86□□□□□ -1.47
SCARB2-214ENST00000638843 M0QXV9 152 aa5.85□□□□□ -1.47
SCARB2-214ENST00000638843 NUPR1O60356 82 aa5.85□□□□□ -1.47
SCARB2-214ENST00000638843 SERF1AO75920 110 aa5.85□□□□□ -1.47
SCARB2-214ENST00000638843 MT1HL1P0DM35 61 aa5.85□□□□□ -1.47
SCARB2-214ENST00000638843 C1orf137Q5JT78 98 aa5.85□□□□□ -1.47
SCARB2-214ENST00000638843 SERTAD4-AS1Q5TG53 156 aa5.85□□□□□ -1.47
SCARB2-214ENST00000638843 CHTOPQ9Y3Y2 248 aaKnown RBP5.85□□□□□ -1.47
SCARB2-214ENST00000638843 TRAV12-1A0A0B4J245 112 aa5.84□□□□□ -1.47
SCARB2-214ENST00000638843 TMEM170BQ5T4T1 132 aa5.84□□□□□ -1.47
SCARB2-214ENST00000638843 SPINK6Q6UWN8 80 aa5.84□□□□□ -1.47
SCARB2-214ENST00000638843 TMA7Q9Y2S6 64 aaKnown RBP5.84□□□□□ -1.47
SCARB2-214ENST00000638843 C22orf24Q9Y442 160 aa5.84□□□□□ -1.48
SCARB2-214ENST00000638843 LEPROTL1O95214 131 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 384.6 ms