RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 CYSLTR1Q9Y271 337 aa7.11□□□□□ -1.27
CACNA1A-250ENST00000637809 CRYGAP11844 174 aa7.1□□□□□ -1.27
CACNA1A-250ENST00000637809 RPL28P46779 137 aaKnown RBP7.1□□□□□ -1.27
CACNA1A-250ENST00000637809 PEA15Q15121 130 aa7.1□□□□□ -1.27
CACNA1A-250ENST00000637809 MRPL55Q7Z7F7 128 aaKnown RBP7.1□□□□□ -1.27
CACNA1A-250ENST00000637809 TYMSOSQ8TAI1 123 aa7.1□□□□□ -1.27
CACNA1A-250ENST00000637809 ALKBH7Q9BT30 221 aaPredicted RBP7.1□□□□□ -1.27
CACNA1A-250ENST00000637809 LAMTOR2Q9Y2Q5 125 aa7.1□□□□□ -1.27
CACNA1A-250ENST00000637809 F8VRH5 84 aa7.09□□□□□ -1.27
CACNA1A-250ENST00000637809 NPSP0C0P6 89 aa7.09□□□□□ -1.27
CACNA1A-250ENST00000637809 Q8N8P6 123 aa7.09□□□□□ -1.27
CACNA1A-250ENST00000637809 MAP1LC3AQ9H492 121 aa7.09□□□□□ -1.27
CACNA1A-250ENST00000637809 ANAPC11Q9NYG5 84 aa7.09□□□□□ -1.27
CACNA1A-250ENST00000637809 CDKN2A-AS1Q9UH64 79 aa7.09□□□□□ -1.27
CACNA1A-250ENST00000637809 KRTAP13-2Q52LG2 175 aa7.08□□□□□ -1.28
CACNA1A-250ENST00000637809 KRTAP13-1Q8IUC0 172 aa7.08□□□□□ -1.28
CACNA1A-250ENST00000637809 RPL37AP8A6NKH3 93 aa7.07□□□□□ -1.28
CACNA1A-250ENST00000637809 HERVK_113P63121 156 aa7.07□□□□□ -1.28
CACNA1A-250ENST00000637809 LINC00167Q96N53 147 aa7.07□□□□□ -1.28
CACNA1A-250ENST00000637809 ORMDL2Q53FV1 153 aa7.06□□□□□ -1.28
CACNA1A-250ENST00000637809 K7EMI3 77 aa7.05□□□□□ -1.28
CACNA1A-250ENST00000637809 SEC11AP67812 179 aa7.05□□□□□ -1.28
CACNA1A-250ENST00000637809 RETNLBQ9BQ08 111 aa7.05□□□□□ -1.28
CACNA1A-250ENST00000637809 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
CACNA1A-250ENST00000637809 GAGE10A6NGK3 116 aa7.04□□□□□ -1.28
CACNA1A-250ENST00000637809 SMIM1B2RUZ4 78 aa7.04□□□□□ -1.28
CACNA1A-250ENST00000637809 CXCL5P42830 114 aa7.04□□□□□ -1.28
CACNA1A-250ENST00000637809 TIMM17AQ99595 171 aa7.04□□□□□ -1.28
CACNA1A-250ENST00000637809 GEMIN7Q9H840 131 aaKnown RBP7.04□□□□□ -1.28
CACNA1A-250ENST00000637809 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
CACNA1A-250ENST00000637809 FAM229BQ4G0N7 80 aa7.03□□□□□ -1.28
CACNA1A-250ENST00000637809 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
CACNA1A-250ENST00000637809 PAPPA-AS1Q5QFB9 102 aa7.02□□□□□ -1.29
CACNA1A-250ENST00000637809 LINC00304Q8N9R0 145 aa7.02□□□□□ -1.29
CACNA1A-250ENST00000637809 TOMM6Q96B49 74 aa7.02□□□□□ -1.29
CACNA1A-250ENST00000637809 NXT2Q9NPJ8 142 aaKnown RBP7.02□□□□□ -1.29
CACNA1A-250ENST00000637809 IGLV5-45A0A087WSX0 123 aa7.01□□□□□ -1.29
CACNA1A-250ENST00000637809 PNRC1Q12796 327 aaPredicted RBP7.01□□□□□ -1.29
CACNA1A-250ENST00000637809 PDZD11Q5EBL8 140 aa7.01□□□□□ -1.29
CACNA1A-250ENST00000637809 COX7B2Q8TF08 81 aa7.01□□□□□ -1.29
CACNA1A-250ENST00000637809 TINCRA0A1B0GVN0 87 aa7□□□□□ -1.29
CACNA1A-250ENST00000637809 SCO1O75880 301 aa7□□□□□ -1.29
CACNA1A-250ENST00000637809 ADCYAP1P18509 176 aa7□□□□□ -1.29
CACNA1A-250ENST00000637809 UBE2AP49459 152 aa7□□□□□ -1.29
CACNA1A-250ENST00000637809 IGLV7-46A0A075B6I9 117 aa6.99□□□□□ -1.29
CACNA1A-250ENST00000637809 A0A1B0GVG6 124 aa6.99□□□□□ -1.29
CACNA1A-250ENST00000637809 G0S2P27469 103 aa6.99□□□□□ -1.29
CACNA1A-250ENST00000637809 RAB5BP61020 215 aa6.99□□□□□ -1.29
CACNA1A-250ENST00000637809 ERASQ7Z444 233 aa6.99□□□□□ -1.29
CACNA1A-250ENST00000637809 CDIP1Q9H305 208 aa6.99□□□□□ -1.29
CACNA1A-250ENST00000637809 IGKV2-28A0A075B6P5 120 aa6.98□□□□□ -1.29
CACNA1A-250ENST00000637809 IGKV2D-28P01615 120 aa6.98□□□□□ -1.29
CACNA1A-250ENST00000637809 MT-ND4LP03901 98 aa6.98□□□□□ -1.29
CACNA1A-250ENST00000637809 CTAG1AP78358 180 aa6.98□□□□□ -1.29
CACNA1A-250ENST00000637809 NKAPP1Q8N9T2 125 aa6.98□□□□□ -1.29
CACNA1A-250ENST00000637809 ANAPC16Q96DE5 110 aa6.98□□□□□ -1.29
CACNA1A-250ENST00000637809 SCGB3A1Q96QR1 104 aa6.98□□□□□ -1.29
CACNA1A-250ENST00000637809 IGKV2D-26A0A0A0MRZ7 120 aa6.97□□□□□ -1.29
CACNA1A-250ENST00000637809 SPINK8P0C7L1 97 aa6.97□□□□□ -1.29
CACNA1A-250ENST00000637809 PRLHP81277 87 aa6.97□□□□□ -1.29
CACNA1A-250ENST00000637809 CST9LQ9H4G1 147 aa6.97□□□□□ -1.29
CACNA1A-250ENST00000637809 KIAA1644Q3SXP7 199 aa6.96□□□□□ -1.3
CACNA1A-250ENST00000637809 LINC01546A6NGU7 62 aa6.95□□□□□ -1.3
CACNA1A-250ENST00000637809 TMEM238C9JI98 176 aa6.95□□□□□ -1.3
CACNA1A-250ENST00000637809 VPREB1P12018 145 aa6.95□□□□□ -1.3
CACNA1A-250ENST00000637809 TMEM126AQ9H061 195 aa6.95□□□□□ -1.3
CACNA1A-250ENST00000637809 M0R378 163 aa6.94□□□□□ -1.3
CACNA1A-250ENST00000637809 C3orf22Q8N5N4 141 aa6.94□□□□□ -1.3
CACNA1A-250ENST00000637809 PLEKHB2Q96CS7 222 aa6.94□□□□□ -1.3
CACNA1A-250ENST00000637809 PPDPFQ9H3Y8 114 aa6.94□□□□□ -1.3
CACNA1A-250ENST00000637809 IGLV5-39A0A0G2JS06 123 aa6.93□□□□□ -1.3
CACNA1A-250ENST00000637809 ATP5LO75964 103 aa6.93□□□□□ -1.3
CACNA1A-250ENST00000637809 FAM19A1Q7Z5A9 133 aa6.93□□□□□ -1.3
CACNA1A-250ENST00000637809 Q8NDZ9 215 aa6.93□□□□□ -1.3
CACNA1A-250ENST00000637809 MRPL18Q9H0U6 180 aaKnown RBP6.93□□□□□ -1.3
CACNA1A-250ENST00000637809 SND1-IT1Q9HBX3 110 aa6.93□□□□□ -1.3
CACNA1A-250ENST00000637809 PFN2P35080 140 aa6.92□□□□□ -1.3
CACNA1A-250ENST00000637809 PMVKQ15126 192 aa6.92□□□□□ -1.3
CACNA1A-250ENST00000637809 LINC01549A6NIU2 74 aa6.91□□□□□ -1.3
CACNA1A-250ENST00000637809 H3BRM9 83 aa6.9□□□□□ -1.3
CACNA1A-250ENST00000637809 ERG28Q9UKR5 140 aa6.9□□□□□ -1.3
CACNA1A-250ENST00000637809 FSIP2Q5CZC0 6907 aa6.9□□□□□ -1.31
CACNA1A-250ENST00000637809 IGLC3P0DOY3 106 aa6.89□□□□□ -1.31
CACNA1A-250ENST00000637809 RPL24P83731 157 aaKnown RBP6.89□□□□□ -1.31
CACNA1A-250ENST00000637809 SPAG11AQ6PDA7 123 aa6.89□□□□□ -1.31
CACNA1A-250ENST00000637809 CBLN2Q8IUK8 224 aa6.89□□□□□ -1.31
CACNA1A-250ENST00000637809 ZNF22P17026 224 aaPredicted RBP6.88□□□□□ -1.31
CACNA1A-250ENST00000637809 COX17Q14061 63 aa6.88□□□□□ -1.31
CACNA1A-250ENST00000637809 KRTAP13-3Q3SY46 172 aa6.88□□□□□ -1.31
CACNA1A-250ENST00000637809 FP248Q71RG6 208 aaPredicted RBP6.88□□□□□ -1.31
CACNA1A-250ENST00000637809 SPRR4Q96PI1 79 aa6.88□□□□□ -1.31
CACNA1A-250ENST00000637809 GNB1LQ9BYB4 327 aa6.88□□□□□ -1.31
CACNA1A-250ENST00000637809 TRAV9-1A0A075B6T8 112 aa6.87□□□□□ -1.31
CACNA1A-250ENST00000637809 RAB14P61106 215 aa6.87□□□□□ -1.31
CACNA1A-250ENST00000637809 HIGD2AQ9BW72 106 aa6.87□□□□□ -1.31
CACNA1A-250ENST00000637809 A0A096LNJ9 63 aa6.86□□□□□ -1.31
CACNA1A-250ENST00000637809 ASB16-AS1Q495Z4 193 aa6.86□□□□□ -1.31
CACNA1A-250ENST00000637809 ZNF625Q96I27 306 aaPredicted RBP6.86□□□□□ -1.31
CACNA1A-250ENST00000637809 KRTAP4-1Q9BYQ7 146 aa6.86□□□□□ -1.31
CACNA1A-250ENST00000637809 LCE2DQ5TA82 110 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms