RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 CCL24O00175 119 aa14.09□□□□□ -0.15
CACNA1A-243ENST00000637616 OVOL2Q9BRP0 275 aa14.09□□□□□ -0.15
CACNA1A-243ENST00000637616 IBA57-AS1B1ANH7 110 aa14.09□□□□□ -0.15
CACNA1A-243ENST00000637616 A0A087WZ39 114 aa14.08□□□□□ -0.16
CACNA1A-243ENST00000637616 RNASE1P07998 156 aaKnown RBP14.08□□□□□ -0.16
CACNA1A-243ENST00000637616 USP24Q9UPU5 2620 aa14.08□□□□□ -0.16
CACNA1A-243ENST00000637616 CRYGAP11844 174 aa14.07□□□□□ -0.16
CACNA1A-243ENST00000637616 SS18Q15532 418 aa14.07□□□□□ -0.16
CACNA1A-243ENST00000637616 OBSCN-AS1Q96MR7 158 aa14.07□□□□□ -0.16
CACNA1A-243ENST00000637616 KIR2DL5BQ8NHK3 375 aa14.07□□□□□ -0.16
CACNA1A-243ENST00000637616 GCN1Q92616 2671 aaKnown RBP14.07□□□□□ -0.16
CACNA1A-243ENST00000637616 A0A096LPF7 62 aa14.06□□□□□ -0.16
CACNA1A-243ENST00000637616 DEFB130BP0DP73 79 aa14.06□□□□□ -0.16
CACNA1A-243ENST00000637616 DEFB130AP0DP74 79 aa14.06□□□□□ -0.16
CACNA1A-243ENST00000637616 HILS1P60008 231 aa14.06□□□□□ -0.16
CACNA1A-243ENST00000637616 TRBV6-4A0A1B0GX49 114 aa14.06□□□□□ -0.16
CACNA1A-243ENST00000637616 LINC00959A0A1B0GUT2 108 aa14.05□□□□□ -0.16
CACNA1A-243ENST00000637616 FHL2Q14192 279 aa14.05□□□□□ -0.16
CACNA1A-243ENST00000637616 Q6JHZ5 121 aa14.05□□□□□ -0.16
CACNA1A-243ENST00000637616 FAM19A5Q7Z5A7 132 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-243ENST00000637616 C16orf74Q96GX8 76 aa14.04□□□□□ -0.16
CACNA1A-243ENST00000637616 ORMDL1Q9P0S3 153 aa14.04□□□□□ -0.16
CACNA1A-243ENST00000637616 USP17L23D6RBM5 183 aa14.04□□□□□ -0.16
CACNA1A-243ENST00000637616 MTORP42345 2549 aa14.04□□□□□ -0.16
CACNA1A-243ENST00000637616 TRAV25A0A0B4J276 109 aa14.02□□□□□ -0.16
CACNA1A-243ENST00000637616 PRB1P04280 392 aa14.02□□□□□ -0.16
CACNA1A-243ENST00000637616 J3KT08 172 aa14.02□□□□□ -0.17
CACNA1A-243ENST00000637616 APCP25054 2843 aa14.01□□□□□ -0.17
CACNA1A-243ENST00000637616 ITPR3Q14573 2671 aa14.01□□□□□ -0.17
CACNA1A-243ENST00000637616 SERP2Q8N6R1 65 aa14□□□□□ -0.17
CACNA1A-243ENST00000637616 NANOS2P60321 138 aaKnown RBP13.99□□□□□ -0.17
CACNA1A-243ENST00000637616 C9orf116Q5BN46 136 aaPredicted RBP13.99□□□□□ -0.17
CACNA1A-243ENST00000637616 DSCR8Q96T75 97 aa13.99□□□□□ -0.17
CACNA1A-243ENST00000637616 ACANP16112 2415 aa13.99□□□□□ -0.17
CACNA1A-243ENST00000637616 CCKP06307 115 aa13.98□□□□□ -0.17
CACNA1A-243ENST00000637616 TRAV23DV6A0A075B6W5 121 aa13.98□□□□□ -0.17
CACNA1A-243ENST00000637616 FAM19A1Q7Z5A9 133 aa13.98□□□□□ -0.17
CACNA1A-243ENST00000637616 CSNK1G2-AS1Q8NCQ2 148 aa13.97□□□□□ -0.17
CACNA1A-243ENST00000637616 UPK3BQ9BT76 320 aa13.97□□□□□ -0.17
CACNA1A-243ENST00000637616 IGLV10-54A0A075B6I4 117 aa13.96□□□□□ -0.17
CACNA1A-243ENST00000637616 DNAJC9-AS1A6NH13 148 aa13.96□□□□□ -0.17
CACNA1A-243ENST00000637616 TMEM86BQ8N661 226 aa13.96□□□□□ -0.17
CACNA1A-243ENST00000637616 FLNAP21333 2647 aaKnown RBP13.96□□□□□ -0.17
CACNA1A-243ENST00000637616 LY6G6DO95868 133 aa13.96□□□□□ -0.17
CACNA1A-243ENST00000637616 GYPEP15421 78 aa13.96□□□□□ -0.18
CACNA1A-243ENST00000637616 Q8N3U1 123 aa13.96□□□□□ -0.18
CACNA1A-243ENST00000637616 Q8N814 137 aa13.96□□□□□ -0.18
CACNA1A-243ENST00000637616 ESM1Q9NQ30 184 aa13.95□□□□□ -0.18
CACNA1A-243ENST00000637616 ENHOQ6UWT2 76 aa13.95□□□□□ -0.18
CACNA1A-243ENST00000637616 C19orf73Q9NVV2 129 aa13.94□□□□□ -0.18
CACNA1A-243ENST00000637616 Q8NDZ9 215 aa13.93□□□□□ -0.18
CACNA1A-243ENST00000637616 DPH3Q96FX2 82 aa13.93□□□□□ -0.18
CACNA1A-243ENST00000637616 OXTP01178 125 aa13.92□□□□□ -0.18
CACNA1A-243ENST00000637616 GHRHP01286 108 aa13.9□□□□□ -0.18
CACNA1A-243ENST00000637616 DEFB113Q30KQ7 82 aa13.9□□□□□ -0.18
CACNA1A-243ENST00000637616 C6orf99Q4VX62 202 aa13.9□□□□□ -0.18
CACNA1A-243ENST00000637616 LINC00269Q8N2A0 174 aa13.9□□□□□ -0.18
CACNA1A-243ENST00000637616 Q8IZM0 81 aa13.89□□□□□ -0.19
CACNA1A-243ENST00000637616 SMIM9A6NGZ8 99 aa13.89□□□□□ -0.19
CACNA1A-243ENST00000637616 BBC3Q96PG8 261 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-243ENST00000637616 TMEM256-PLSCR3K7ERE1 68 aa13.87□□□□□ -0.19
CACNA1A-243ENST00000637616 JMJD7-PLA2G4BH0Y9G9 81 aa13.87□□□□□ -0.19
CACNA1A-243ENST00000637616 TMEM258P61165 79 aa13.87□□□□□ -0.19
CACNA1A-243ENST00000637616 M0R2N4 97 aa13.86□□□□□ -0.19
CACNA1A-243ENST00000637616 LINC00167Q96N53 147 aa13.86□□□□□ -0.19
CACNA1A-243ENST00000637616 DEFB4AO15263 64 aa13.85□□□□□ -0.19
CACNA1A-243ENST00000637616 IGLV1-51P01701 117 aa13.85□□□□□ -0.19
CACNA1A-243ENST00000637616 SPATA3Q8NHX4 192 aa13.85□□□□□ -0.19
CACNA1A-243ENST00000637616 RPS28P62857 69 aaKnown RBP13.84□□□□□ -0.19
CACNA1A-243ENST00000637616 KIAA0087Q14695 138 aa13.84□□□□□ -0.19
CACNA1A-243ENST00000637616 LINC01006Q8NI28 216 aa13.84□□□□□ -0.19
CACNA1A-243ENST00000637616 WFDC11Q8NEX6 87 aa13.83□□□□□ -0.2
CACNA1A-243ENST00000637616 S100A7L2Q5SY68 101 aa13.83□□□□□ -0.2
CACNA1A-243ENST00000637616 C20orf197Q8N268 126 aa13.83□□□□□ -0.2
CACNA1A-243ENST00000637616 C6orf223Q8N319 242 aa13.83□□□□□ -0.2
CACNA1A-243ENST00000637616 CHCHD10Q8WYQ3 142 aaPredicted RBP13.82□□□□□ -0.2
CACNA1A-243ENST00000637616 ANGP03950 147 aaKnown RBP13.82□□□□□ -0.2
CACNA1A-243ENST00000637616 UBL5Q9BZL1 73 aa13.81□□□□□ -0.2
CACNA1A-243ENST00000637616 C10orf25Q5T742 122 aa13.81□□□□□ -0.2
CACNA1A-243ENST00000637616 KRTAP1-3Q8IUG1 177 aa13.81□□□□□ -0.2
CACNA1A-243ENST00000637616 A0A1B0GUV1 79 aa13.8□□□□□ -0.2
CACNA1A-243ENST00000637616 LAMTOR3Q9UHA4 124 aa13.8□□□□□ -0.2
CACNA1A-243ENST00000637616 UBR5O95071 2799 aaPredicted RBP13.8□□□□□ -0.2
CACNA1A-243ENST00000637616 C4orf26Q17RF5 130 aa13.8□□□□□ -0.2
CACNA1A-243ENST00000637616 C5orf47Q569G3 176 aa13.79□□□□□ -0.2
CACNA1A-243ENST00000637616 CMC4P56277 68 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-243ENST00000637616 UNQ6190/PRO20217Q6UXQ8 127 aa13.78□□□□□ -0.2
CACNA1A-243ENST00000637616 VWFP04275 2813 aa13.78□□□□□ -0.2
CACNA1A-243ENST00000637616 HAMPP81172 84 aa13.77□□□□□ -0.2
CACNA1A-243ENST00000637616 RBM3P98179 157 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-243ENST00000637616 CD164L2Q6UWJ8 174 aa13.77□□□□□ -0.21
CACNA1A-243ENST00000637616 LINC00575Q6W349 94 aa13.77□□□□□ -0.21
CACNA1A-243ENST00000637616 NDUFC2O95298 119 aa13.76□□□□□ -0.21
CACNA1A-243ENST00000637616 REG3AQ06141 175 aa13.76□□□□□ -0.21
CACNA1A-243ENST00000637616 PRO0255Q9UI72 69 aa13.76□□□□□ -0.21
CACNA1A-243ENST00000637616 ZNF843Q8N446 348 aa13.75□□□□□ -0.21
CACNA1A-243ENST00000637616 LYPD5Q6UWN5 251 aa13.75□□□□□ -0.21
CACNA1A-243ENST00000637616 Q6ZQT0 140 aa13.75□□□□□ -0.21
CACNA1A-243ENST00000637616 ATP5EP2Q5VTU8 51 aa13.73□□□□□ -0.21
CACNA1A-243ENST00000637616 HRCT1Q6UXD1 115 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms