RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 CYSTM1Q9H1C7 97 aa11.03□□□□□ -0.64
CACNA1A-235ENST00000637004 TOMM7Q9P0U1 55 aa11.03□□□□□ -0.64
CACNA1A-235ENST00000637004 CCL18P55774 89 aa11.02□□□□□ -0.65
CACNA1A-235ENST00000637004 LINC01561Q8N1V8 128 aa11.02□□□□□ -0.65
CACNA1A-235ENST00000637004 KRTAP1-3Q8IUG1 177 aa11.01□□□□□ -0.65
CACNA1A-235ENST00000637004 XCL2Q9UBD3 114 aa11.01□□□□□ -0.65
CACNA1A-235ENST00000637004 HIVEP2P31629 2446 aa11.01□□□□□ -0.65
CACNA1A-235ENST00000637004 A0A087WVE0 104 aa11.01□□□□□ -0.65
CACNA1A-235ENST00000637004 IBA57-AS1B1ANH7 110 aa11.01□□□□□ -0.65
CACNA1A-235ENST00000637004 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
CACNA1A-235ENST00000637004 DYNLRB2Q8TF09 96 aa11.01□□□□□ -0.65
CACNA1A-235ENST00000637004 NCR3O14931 201 aa11□□□□□ -0.65
CACNA1A-235ENST00000637004 IL17DQ8TAD2 202 aa11□□□□□ -0.65
CACNA1A-235ENST00000637004 NF1P21359 2839 aa11□□□□□ -0.65
CACNA1A-235ENST00000637004 DEFB136Q30KP8 78 aa11□□□□□ -0.65
CACNA1A-235ENST00000637004 ORMDL1Q9P0S3 153 aa10.99□□□□□ -0.65
CACNA1A-235ENST00000637004 ZNF702PQ9H963 129 aa10.99□□□□□ -0.65
CACNA1A-235ENST00000637004 FN1P02751 2386 aaKnown RBP10.98□□□□□ -0.65
CACNA1A-235ENST00000637004 PAX4O43316 350 aa10.98□□□□□ -0.65
CACNA1A-235ENST00000637004 SEC61GP60059 68 aa10.98□□□□□ -0.65
CACNA1A-235ENST00000637004 CCKP06307 115 aa10.98□□□□□ -0.65
CACNA1A-235ENST00000637004 ATP5EP2Q5VTU8 51 aa10.97□□□□□ -0.65
CACNA1A-235ENST00000637004 Q6ZTI0 123 aa10.97□□□□□ -0.65
CACNA1A-235ENST00000637004 C1orf158Q8N1D5 194 aa10.97□□□□□ -0.65
CACNA1A-235ENST00000637004 PRO0628Q9UI54 55 aa10.96□□□□□ -0.65
CACNA1A-235ENST00000637004 DEFB114Q30KQ6 69 aa10.96□□□□□ -0.66
CACNA1A-235ENST00000637004 C18orf65Q6ZTR6 163 aa10.96□□□□□ -0.66
CACNA1A-235ENST00000637004 STHQ8IWL8 128 aa10.96□□□□□ -0.66
CACNA1A-235ENST00000637004 NSD1Q96L73 2696 aaPredicted RBP10.95□□□□□ -0.66
CACNA1A-235ENST00000637004 JMJD7-PLA2G4BH0Y9G9 81 aa10.95□□□□□ -0.66
CACNA1A-235ENST00000637004 SLPIP03973 132 aa10.95□□□□□ -0.66
CACNA1A-235ENST00000637004 PFN2P35080 140 aa10.95□□□□□ -0.66
CACNA1A-235ENST00000637004 TRBV6-4A0A1B0GX49 114 aa10.94□□□□□ -0.66
CACNA1A-235ENST00000637004 DSCR8Q96T75 97 aa10.94□□□□□ -0.66
CACNA1A-235ENST00000637004 IGHV3OR16-9A0A0B4J2B5 98 aa10.94□□□□□ -0.66
CACNA1A-235ENST00000637004 LY6G6DO95868 133 aa10.94□□□□□ -0.66
CACNA1A-235ENST00000637004 LINC01356Q8N9X3 169 aa10.94□□□□□ -0.66
CACNA1A-235ENST00000637004 IGKV3OR2-268A0A0C4DH90 116 aa10.94□□□□□ -0.66
CACNA1A-235ENST00000637004 C1orf43Q9BWL3 253 aa10.93□□□□□ -0.66
CACNA1A-235ENST00000637004 A0A087WZ39 114 aa10.93□□□□□ -0.66
CACNA1A-235ENST00000637004 DSCR9P59020 149 aa10.93□□□□□ -0.66
CACNA1A-235ENST00000637004 NDUFC2-KCTD14E9PQ53 114 aa10.92□□□□□ -0.66
CACNA1A-235ENST00000637004 SS18Q15532 418 aa10.92□□□□□ -0.66
CACNA1A-235ENST00000637004 NDUFC2O95298 119 aa10.92□□□□□ -0.66
CACNA1A-235ENST00000637004 C4orf3Q8WVX3 66 aa10.92□□□□□ -0.66
CACNA1A-235ENST00000637004 RPL35AP18077 110 aaKnown RBP10.91□□□□□ -0.66
CACNA1A-235ENST00000637004 ODF3L2Q3SX64 289 aa10.91□□□□□ -0.66
CACNA1A-235ENST00000637004 Q6YL49 198 aa10.91□□□□□ -0.66
CACNA1A-235ENST00000637004 LINC00167Q96N53 147 aa10.91□□□□□ -0.66
CACNA1A-235ENST00000637004 GHRHP01286 108 aa10.9□□□□□ -0.66
CACNA1A-235ENST00000637004 TMEM86BQ8N661 226 aa10.9□□□□□ -0.66
CACNA1A-235ENST00000637004 TMEM256-PLSCR3K7ERE1 68 aa10.9□□□□□ -0.66
CACNA1A-235ENST00000637004 KHDC1LQ5JSQ8 128 aa10.9□□□□□ -0.66
CACNA1A-235ENST00000637004 NOP10Q9NPE3 64 aaKnown RBP10.9□□□□□ -0.66
CACNA1A-235ENST00000637004 ATRQ13535 2644 aa10.9□□□□□ -0.66
CACNA1A-235ENST00000637004 CR1P17927 2039 aa10.89□□□□□ -0.67
CACNA1A-235ENST00000637004 C6orf226Q5I0X4 101 aa10.89□□□□□ -0.67
CACNA1A-235ENST00000637004 IGLV4-60A0A075B6I1 120 aa10.89□□□□□ -0.67
CACNA1A-235ENST00000637004 TRGV2A0A075B6R0 118 aa10.89□□□□□ -0.67
CACNA1A-235ENST00000637004 TRBV10-3A0A0K0K1G6 114 aa10.89□□□□□ -0.67
CACNA1A-235ENST00000637004 LINC00336Q6ZUF6 198 aa10.89□□□□□ -0.67
CACNA1A-235ENST00000637004 A0A096LNT2 108 aa10.88□□□□□ -0.67
CACNA1A-235ENST00000637004 FHL2Q14192 279 aa10.88□□□□□ -0.67
CACNA1A-235ENST00000637004 HILS1P60008 231 aa10.88□□□□□ -0.67
CACNA1A-235ENST00000637004 LYPD5Q6UWN5 251 aa10.88□□□□□ -0.67
CACNA1A-235ENST00000637004 PKIGQ9Y2B9 76 aa10.88□□□□□ -0.67
CACNA1A-235ENST00000637004 Q8N814 137 aa10.87□□□□□ -0.67
CACNA1A-235ENST00000637004 UBL5Q9BZL1 73 aa10.87□□□□□ -0.67
CACNA1A-235ENST00000637004 TRBV6-8A0A0A6YYG3 113 aa10.87□□□□□ -0.67
CACNA1A-235ENST00000637004 LOC100131303A0A0U1RQF7 123 aa10.87□□□□□ -0.67
CACNA1A-235ENST00000637004 TRAV23DV6A0A075B6W5 121 aa10.86□□□□□ -0.67
CACNA1A-235ENST00000637004 TRGV4A0A0C4DH28 118 aa10.85□□□□□ -0.67
CACNA1A-235ENST00000637004 ENHOQ6UWT2 76 aa10.85□□□□□ -0.67
CACNA1A-235ENST00000637004 C11orf44Q8N8P7 122 aa10.85□□□□□ -0.67
CACNA1A-235ENST00000637004 C16orf74Q96GX8 76 aa10.85□□□□□ -0.67
CACNA1A-235ENST00000637004 IGHV4-31P0DP07 118 aa10.85□□□□□ -0.67
CACNA1A-235ENST00000637004 FAM19A1Q7Z5A9 133 aa10.84□□□□□ -0.67
CACNA1A-235ENST00000637004 WFDC9Q8NEX5 89 aa10.84□□□□□ -0.67
CACNA1A-235ENST00000637004 LINC00959A0A1B0GUT2 108 aa10.83□□□□□ -0.68
CACNA1A-235ENST00000637004 C2CD3Q4AC94 2353 aa10.83□□□□□ -0.68
CACNA1A-235ENST00000637004 C11orf68Q9H3H3 251 aaKnown RBP10.83□□□□□ -0.68
CACNA1A-235ENST00000637004 V9GYY9 64 aa10.83□□□□□ -0.68
CACNA1A-235ENST00000637004 A0A1W2PRX2 142 aa10.82□□□□□ -0.68
CACNA1A-235ENST00000637004 FSHBP01225 129 aa10.82□□□□□ -0.68
CACNA1A-235ENST00000637004 ANK3Q12955 4377 aaKnown RBP10.82□□□□□ -0.68
CACNA1A-235ENST00000637004 Q8IZM0 81 aa10.82□□□□□ -0.68
CACNA1A-235ENST00000637004 C20orf197Q8N268 126 aa10.82□□□□□ -0.68
CACNA1A-235ENST00000637004 BCE1O60756 84 aa10.81□□□□□ -0.68
CACNA1A-235ENST00000637004 PLAC8L1A1L4L8 177 aa10.8□□□□□ -0.68
CACNA1A-235ENST00000637004 NANOS2P60321 138 aaKnown RBP10.8□□□□□ -0.68
CACNA1A-235ENST00000637004 KRTAP1-1Q07627 177 aa10.8□□□□□ -0.68
CACNA1A-235ENST00000637004 FAM236DA0A1B0GTK5 79 aa10.8□□□□□ -0.68
CACNA1A-235ENST00000637004 FAM236CP0DP71 79 aa10.8□□□□□ -0.68
CACNA1A-235ENST00000637004 XCL1P47992 114 aa10.8□□□□□ -0.68
CACNA1A-235ENST00000637004 INAFM1C9JVW0 142 aa10.79□□□□□ -0.68
CACNA1A-235ENST00000637004 TRAV7A0A075B6U4 112 aa10.77□□□□□ -0.68
CACNA1A-235ENST00000637004 CMC4P56277 68 aaPredicted RBP10.77□□□□□ -0.68
CACNA1A-235ENST00000637004 RNASE1P07998 156 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-235ENST00000637004 PRR3P79522 188 aaKnown RBP10.76□□□□□ -0.69
CACNA1A-235ENST00000637004 COX17Q14061 63 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms