RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 LITAFQ99732 161 aa6.73□□□□□ -1.33
CACNA1A-216ENST00000635742 TM2D2Q9BX73 214 aa6.73□□□□□ -1.33
CACNA1A-216ENST00000635742 COX7A2LO14548 114 aa6.72□□□□□ -1.33
CACNA1A-216ENST00000635742 APLNQ9ULZ1 77 aa6.72□□□□□ -1.33
CACNA1A-216ENST00000635742 SRSF9Q13242 221 aaKnown RBP eCLIP6.72□□□□□ -1.33
CACNA1A-216ENST00000635742 Q6ZVH6 145 aa6.72□□□□□ -1.33
CACNA1A-216ENST00000635742 LINC01561Q8N1V8 128 aa6.72□□□□□ -1.33
CACNA1A-216ENST00000635742 DYNC2H1Q8NCM8 4307 aaKnown RBP6.71□□□□□ -1.33
CACNA1A-216ENST00000635742 MIAQ16674 131 aa6.71□□□□□ -1.34
CACNA1A-216ENST00000635742 LINC01620Q4KN68 170 aa6.71□□□□□ -1.34
CACNA1A-216ENST00000635742 ADAMTSL4-AS1Q5T5F5 129 aa6.71□□□□□ -1.34
CACNA1A-216ENST00000635742 UPK3BQ9BT76 320 aa6.71□□□□□ -1.34
CACNA1A-216ENST00000635742 TRAV8-4A0A0B4J246 113 aa6.7□□□□□ -1.34
CACNA1A-216ENST00000635742 KRTAP26-1Q6PEX3 210 aa6.7□□□□□ -1.34
CACNA1A-216ENST00000635742 NUPR2A6NF83 97 aa6.7□□□□□ -1.34
CACNA1A-216ENST00000635742 K7ERJ3 54 aa6.7□□□□□ -1.34
CACNA1A-216ENST00000635742 TAX1BP3O14907 124 aa6.7□□□□□ -1.34
CACNA1A-216ENST00000635742 LINC00336Q6ZUF6 198 aa6.7□□□□□ -1.34
CACNA1A-216ENST00000635742 Q8IZM0 81 aa6.7□□□□□ -1.34
CACNA1A-216ENST00000635742 ERG28Q9UKR5 140 aa6.7□□□□□ -1.34
CACNA1A-216ENST00000635742 A6NDN8 102 aa6.69□□□□□ -1.34
CACNA1A-216ENST00000635742 TIMM17BO60830 172 aa6.69□□□□□ -1.34
CACNA1A-216ENST00000635742 KIAA0087Q14695 138 aa6.69□□□□□ -1.34
CACNA1A-216ENST00000635742 DAND5Q8N907 189 aa6.69□□□□□ -1.34
CACNA1A-216ENST00000635742 OR13C6PQ8NH95 151 aa6.69□□□□□ -1.34
CACNA1A-216ENST00000635742 SPANXDQ9BXN6 97 aa6.69□□□□□ -1.34
CACNA1A-216ENST00000635742 NHP2Q9NX24 153 aaKnown RBP6.69□□□□□ -1.34
CACNA1A-216ENST00000635742 SPANXCQ9NY87 97 aa6.69□□□□□ -1.34
CACNA1A-216ENST00000635742 MEIG1Q5JSS6 88 aa6.68□□□□□ -1.34
CACNA1A-216ENST00000635742 C2orf82Q6UX34 121 aa6.68□□□□□ -1.34
CACNA1A-216ENST00000635742 Q9HAA7 133 aa6.68□□□□□ -1.34
CACNA1A-216ENST00000635742 PRSS2P07478 247 aa6.68□□□□□ -1.34
CACNA1A-216ENST00000635742 SMIM13P0DJ93 91 aa6.68□□□□□ -1.34
CACNA1A-216ENST00000635742 NPC2P61916 151 aa6.68□□□□□ -1.34
CACNA1A-216ENST00000635742 MUSTN1Q8IVN3 82 aa6.68□□□□□ -1.34
CACNA1A-216ENST00000635742 COX11Q9Y6N1 276 aa6.68□□□□□ -1.34
CACNA1A-216ENST00000635742 IGKV2D-24A0A075B6R9 120 aa6.67□□□□□ -1.34
CACNA1A-216ENST00000635742 IBA57-AS1B1ANH7 110 aa6.67□□□□□ -1.34
CACNA1A-216ENST00000635742 SPAG11BQ08648 103 aa6.67□□□□□ -1.34
CACNA1A-216ENST00000635742 CDIP1Q9H305 208 aa6.67□□□□□ -1.34
CACNA1A-216ENST00000635742 KLK5Q9Y337 293 aaPredicted RBP6.67□□□□□ -1.34
CACNA1A-216ENST00000635742 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
CACNA1A-216ENST00000635742 UBE2DNLQ8IWF7 75 aa6.66□□□□□ -1.34
CACNA1A-216ENST00000635742 RAB37Q96AX2 223 aa6.66□□□□□ -1.34
CACNA1A-216ENST00000635742 LINC00526Q96FQ7 95 aa6.66□□□□□ -1.34
CACNA1A-216ENST00000635742 DNAH1Q9P2D7 4330 aa6.66□□□□□ -1.34
CACNA1A-216ENST00000635742 A0A1B0GWB2 263 aa6.66□□□□□ -1.34
CACNA1A-216ENST00000635742 B5MCH6 92 aa6.66□□□□□ -1.34
CACNA1A-216ENST00000635742 APOMO95445 188 aa6.66□□□□□ -1.34
CACNA1A-216ENST00000635742 CIRBPQ14011 172 aaKnown RBP6.66□□□□□ -1.34
CACNA1A-216ENST00000635742 C6orf223Q8N319 242 aa6.66□□□□□ -1.34
CACNA1A-216ENST00000635742 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
CACNA1A-216ENST00000635742 FBN3Q75N90 2809 aa6.65□□□□□ -1.34
CACNA1A-216ENST00000635742 SOSTDC1Q6X4U4 206 aa6.65□□□□□ -1.34
CACNA1A-216ENST00000635742 NAA38Q9BRA0 125 aaKnown RBP6.65□□□□□ -1.34
CACNA1A-216ENST00000635742 CSMD3Q7Z407 3707 aa6.64□□□□□ -1.35
CACNA1A-216ENST00000635742 VPREB1P12018 145 aa6.64□□□□□ -1.35
CACNA1A-216ENST00000635742 CXCL5P42830 114 aa6.64□□□□□ -1.35
CACNA1A-216ENST00000635742 SFTA2Q6UW10 78 aa6.64□□□□□ -1.35
CACNA1A-216ENST00000635742 C15orf56Q8N910 161 aa6.64□□□□□ -1.35
CACNA1A-216ENST00000635742 DNAH7Q8WXX0 4024 aa6.64□□□□□ -1.35
CACNA1A-216ENST00000635742 CFC1BP0CG36 223 aa6.64□□□□□ -1.35
CACNA1A-216ENST00000635742 CFC1P0CG37 223 aa6.64□□□□□ -1.35
CACNA1A-216ENST00000635742 RPL24P83731 157 aaKnown RBP6.64□□□□□ -1.35
CACNA1A-216ENST00000635742 HIGD2BQ4VC39 106 aa6.64□□□□□ -1.35
CACNA1A-216ENST00000635742 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
CACNA1A-216ENST00000635742 TMEM126AQ9H061 195 aa6.64□□□□□ -1.35
CACNA1A-216ENST00000635742 USP17L23D6RBM5 183 aa6.63□□□□□ -1.35
CACNA1A-216ENST00000635742 IFITM1P13164 125 aa6.63□□□□□ -1.35
CACNA1A-216ENST00000635742 PFN2P35080 140 aa6.63□□□□□ -1.35
CACNA1A-216ENST00000635742 LINC00158P58513 81 aa6.63□□□□□ -1.35
CACNA1A-216ENST00000635742 CASC10Q5T4H9 136 aa6.63□□□□□ -1.35
CACNA1A-216ENST00000635742 C10orf25Q5T742 122 aa6.63□□□□□ -1.35
CACNA1A-216ENST00000635742 MIR7-3HGQ8N6C7 128 aa6.63□□□□□ -1.35
CACNA1A-216ENST00000635742 PLECQ15149 4684 aaKnown RBP6.63□□□□□ -1.35
CACNA1A-216ENST00000635742 UNQ6190/PRO20217Q6UXQ8 127 aa6.62□□□□□ -1.35
CACNA1A-216ENST00000635742 C9orf118A6NHY6 69 aa6.62□□□□□ -1.35
CACNA1A-216ENST00000635742 H3BUT2 72 aa6.62□□□□□ -1.35
CACNA1A-216ENST00000635742 C9orf116Q5BN46 136 aaPredicted RBP6.62□□□□□ -1.35
CACNA1A-216ENST00000635742 NTN5Q8WTR8 489 aaPredicted RBP6.62□□□□□ -1.35
CACNA1A-216ENST00000635742 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
CACNA1A-216ENST00000635742 STARD9Q9P2P6 4700 aa6.61□□□□□ -1.35
CACNA1A-216ENST00000635742 A0A0B4J2C4 111 aa6.6□□□□□ -1.35
CACNA1A-216ENST00000635742 LYSTQ99698 3801 aa6.6□□□□□ -1.35
CACNA1A-216ENST00000635742 GVQW2A0A096LPI5 108 aaPredicted RBP6.6□□□□□ -1.35
CACNA1A-216ENST00000635742 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.6□□□□□ -1.35
CACNA1A-216ENST00000635742 C4orf26Q17RF5 130 aa6.6□□□□□ -1.35
CACNA1A-216ENST00000635742 MUC7Q8TAX7 377 aa6.6□□□□□ -1.35
CACNA1A-216ENST00000635742 RMI2Q96E14 147 aa6.6□□□□□ -1.35
CACNA1A-216ENST00000635742 C6orf48Q9UBA6 75 aa6.6□□□□□ -1.35
CACNA1A-216ENST00000635742 SERTAD4-AS1Q5TG53 156 aa6.59□□□□□ -1.35
CACNA1A-216ENST00000635742 CAMK2N2Q96S95 79 aa6.59□□□□□ -1.35
CACNA1A-216ENST00000635742 PRO1854Q9UHT4 67 aa6.58□□□□□ -1.36
CACNA1A-216ENST00000635742 A0A1W2PPM0 123 aa6.58□□□□□ -1.36
CACNA1A-216ENST00000635742 Q6ZRU5 148 aa6.58□□□□□ -1.36
CACNA1A-216ENST00000635742 GTF2H5Q6ZYL4 71 aa6.58□□□□□ -1.36
CACNA1A-216ENST00000635742 COPS9Q8WXC6 57 aa6.58□□□□□ -1.36
CACNA1A-216ENST00000635742 VPS13DQ5THJ4 4388 aa6.57□□□□□ -1.36
CACNA1A-216ENST00000635742 NBDYA0A0U1RRE5 68 aa6.57□□□□□ -1.36
CACNA1A-216ENST00000635742 COX17Q14061 63 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms