RNA–Protein interactions for RNA: ENST00000630147.1

SPTAN1-220, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-220ENST00000630147 MLST8Q9BVC4 326 aa6.44□□□□□ -1.38
SPTAN1-220ENST00000630147 GNB1LQ9BYB4 327 aa6.44□□□□□ -1.38
SPTAN1-220ENST00000630147 MRPL18Q9H0U6 180 aaKnown RBP6.44□□□□□ -1.38
SPTAN1-220ENST00000630147 SPANXB1Q9NS25 103 aaPredicted RBP6.44□□□□□ -1.38
SPTAN1-220ENST00000630147 FAT4Q6V0I7 4981 aa6.43□□□□□ -1.38
SPTAN1-220ENST00000630147 TRAV26-2A0A0B4J265 109 aa6.43□□□□□ -1.38
SPTAN1-220ENST00000630147 PMCHP20382 165 aa6.43□□□□□ -1.38
SPTAN1-220ENST00000630147 LINC00310P59036 64 aa6.43□□□□□ -1.38
SPTAN1-220ENST00000630147 FOXI1Q12951 378 aa6.43□□□□□ -1.38
SPTAN1-220ENST00000630147 A0A1W2PNN7 141 aa6.42□□□□□ -1.38
SPTAN1-220ENST00000630147 H3BUT2 72 aa6.42□□□□□ -1.38
SPTAN1-220ENST00000630147 PGLYRP4Q96LB8 373 aa6.42□□□□□ -1.38
SPTAN1-220ENST00000630147 SPANXDQ9BXN6 97 aa6.42□□□□□ -1.38
SPTAN1-220ENST00000630147 TMEM191AQ9H0A3 160 aa6.42□□□□□ -1.38
SPTAN1-220ENST00000630147 PSORS1C2Q9UIG4 136 aa6.42□□□□□ -1.38
SPTAN1-220ENST00000630147 IGLC6P0CF74 106 aa6.41□□□□□ -1.38
SPTAN1-220ENST00000630147 CACNG7P62955 275 aa6.41□□□□□ -1.38
SPTAN1-220ENST00000630147 C1orf137Q5JT78 98 aa6.41□□□□□ -1.38
SPTAN1-220ENST00000630147 RPL39LQ96EH5 51 aaKnown RBP6.41□□□□□ -1.38
SPTAN1-220ENST00000630147 MAP1LC3AQ9H492 121 aa6.41□□□□□ -1.38
SPTAN1-220ENST00000630147 KRTAP9-6A0A140TA67 174 aa6.4□□□□□ -1.38
SPTAN1-220ENST00000630147 FGF6P10767 208 aa6.4□□□□□ -1.38
SPTAN1-220ENST00000630147 NTF3P20783 257 aa6.4□□□□□ -1.38
SPTAN1-220ENST00000630147 PRR4Q16378 134 aa6.4□□□□□ -1.38
SPTAN1-220ENST00000630147 Q6Q795 121 aa6.4□□□□□ -1.38
SPTAN1-220ENST00000630147 PHF5AQ7RTV0 110 aaKnown RBP6.4□□□□□ -1.38
SPTAN1-220ENST00000630147 LINC00474Q9P2X8 69 aa6.4□□□□□ -1.38
SPTAN1-220ENST00000630147 SYCNQ0VAF6 134 aa6.39□□□□□ -1.39
SPTAN1-220ENST00000630147 KIAA1644Q3SXP7 199 aa6.39□□□□□ -1.39
SPTAN1-220ENST00000630147 CENPWQ5EE01 88 aa6.39□□□□□ -1.39
SPTAN1-220ENST00000630147 LYZL1Q6UWQ5 148 aa6.39□□□□□ -1.39
SPTAN1-220ENST00000630147 PPDPFQ9H3Y8 114 aa6.39□□□□□ -1.39
SPTAN1-220ENST00000630147 IGHV1-58A0A0C4DH39 117 aa6.38□□□□□ -1.39
SPTAN1-220ENST00000630147 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
SPTAN1-220ENST00000630147 APCSP02743 223 aa6.38□□□□□ -1.39
SPTAN1-220ENST00000630147 SMIM13P0DJ93 91 aa6.38□□□□□ -1.39
SPTAN1-220ENST00000630147 C9orf116Q5BN46 136 aaPredicted RBP6.38□□□□□ -1.39
SPTAN1-220ENST00000630147 Q6ZUT4 128 aa6.38□□□□□ -1.39
SPTAN1-220ENST00000630147 GATD1Q8NB37 220 aa6.38□□□□□ -1.39
SPTAN1-220ENST00000630147 TSKUQ8WUA8 353 aa6.38□□□□□ -1.39
SPTAN1-220ENST00000630147 LINC00959A0A1B0GUT2 108 aa6.37□□□□□ -1.39
SPTAN1-220ENST00000630147 A0A1B0GX51 115 aa6.37□□□□□ -1.39
SPTAN1-220ENST00000630147 J3KT08 172 aa6.37□□□□□ -1.39
SPTAN1-220ENST00000630147 HSBP1O75506 76 aa6.37□□□□□ -1.39
SPTAN1-220ENST00000630147 COX8AP10176 69 aa6.37□□□□□ -1.39
SPTAN1-220ENST00000630147 CAMPP49913 170 aa6.37□□□□□ -1.39
SPTAN1-220ENST00000630147 RPS28P62857 69 aaKnown RBP6.37□□□□□ -1.39
SPTAN1-220ENST00000630147 RPL18AQ02543 176 aaKnown RBP6.37□□□□□ -1.39
SPTAN1-220ENST00000630147 TWIST1Q15672 202 aa6.37□□□□□ -1.39
SPTAN1-220ENST00000630147 TMEM136Q6ZRR5 245 aa6.37□□□□□ -1.39
SPTAN1-220ENST00000630147 IGLV4-69A0A075B6H9 119 aa6.36□□□□□ -1.39
SPTAN1-220ENST00000630147 LOC107984640A0A0U1RRK4 108 aa6.36□□□□□ -1.39
SPTAN1-220ENST00000630147 SYS1-DBNDD2H3BUS1 97 aa6.36□□□□□ -1.39
SPTAN1-220ENST00000630147 IFITM1P13164 125 aa6.36□□□□□ -1.39
SPTAN1-220ENST00000630147 FOXA3P55318 350 aaPredicted RBP6.36□□□□□ -1.39
SPTAN1-220ENST00000630147 KRTAP11-1Q8IUC1 163 aa6.36□□□□□ -1.39
SPTAN1-220ENST00000630147 ATOH7Q8N100 152 aa6.36□□□□□ -1.39
SPTAN1-220ENST00000630147 OPRPNQ99935 248 aaPredicted RBP6.36□□□□□ -1.39
SPTAN1-220ENST00000630147 MAP1LC3CQ9BXW4 147 aa6.36□□□□□ -1.39
SPTAN1-220ENST00000630147 C19orf71A6NCJ1 209 aa6.35□□□□□ -1.39
SPTAN1-220ENST00000630147 NDUFV3P56181 108 aaKnown RBP6.35□□□□□ -1.39
SPTAN1-220ENST00000630147 GAGE2EQ4V326 116 aa6.35□□□□□ -1.39
SPTAN1-220ENST00000630147 GAGE2DQ9UEU5 116 aa6.35□□□□□ -1.39
SPTAN1-220ENST00000630147 PKIGQ9Y2B9 76 aa6.35□□□□□ -1.39
SPTAN1-220ENST00000630147 A0A0U1RQV1 116 aa6.34□□□□□ -1.39
SPTAN1-220ENST00000630147 FAM168BA1KXE4 195 aa6.34□□□□□ -1.39
SPTAN1-220ENST00000630147 SDHAF1A6NFY7 115 aa6.34□□□□□ -1.39
SPTAN1-220ENST00000630147 H3BMG7 143 aa6.34□□□□□ -1.39
SPTAN1-220ENST00000630147 IGLV7-43P04211 117 aa6.34□□□□□ -1.39
SPTAN1-220ENST00000630147 RNASE13Q5GAN3 156 aaKnown RBP6.34□□□□□ -1.39
SPTAN1-220ENST00000630147 TMEM101Q96IK0 257 aa6.34□□□□□ -1.39
SPTAN1-220ENST00000630147 CAMK2N2Q96S95 79 aa6.34□□□□□ -1.39
SPTAN1-220ENST00000630147 CDIP1Q9H305 208 aa6.34□□□□□ -1.39
SPTAN1-220ENST00000630147 A0A087WZ39 114 aa6.33□□□□□ -1.4
SPTAN1-220ENST00000630147 F2Z2F3 143 aa6.33□□□□□ -1.4
SPTAN1-220ENST00000630147 APOMO95445 188 aa6.33□□□□□ -1.4
SPTAN1-220ENST00000630147 MT-ATP8P03928 68 aa6.33□□□□□ -1.4
SPTAN1-220ENST00000630147 MALP21145 153 aa6.33□□□□□ -1.4
SPTAN1-220ENST00000630147 SS18Q15532 418 aa6.33□□□□□ -1.4
SPTAN1-220ENST00000630147 NUP35Q8NFH5 326 aa6.33□□□□□ -1.4
SPTAN1-220ENST00000630147 DIRC1Q969H9 104 aa6.33□□□□□ -1.4
SPTAN1-220ENST00000630147 H0Y9J4 135 aa6.32□□□□□ -1.4
SPTAN1-220ENST00000630147 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
SPTAN1-220ENST00000630147 NCR2O95944 276 aa6.32□□□□□ -1.4
SPTAN1-220ENST00000630147 MEIG1Q5JSS6 88 aa6.32□□□□□ -1.4
SPTAN1-220ENST00000630147 LCE2AQ5TA79 106 aaPredicted RBP6.32□□□□□ -1.4
SPTAN1-220ENST00000630147 CD164L2Q6UWJ8 174 aa6.32□□□□□ -1.4
SPTAN1-220ENST00000630147 C2orf91Q6ZV80 131 aa6.32□□□□□ -1.4
SPTAN1-220ENST00000630147 CHCHD1Q96BP2 118 aaKnown RBP6.32□□□□□ -1.4
SPTAN1-220ENST00000630147 TRBV20OR9-2A0A075B6H5 130 aa6.31□□□□□ -1.4
SPTAN1-220ENST00000630147 H7C423 109 aa6.31□□□□□ -1.4
SPTAN1-220ENST00000630147 TSHBP01222 138 aa6.31□□□□□ -1.4
SPTAN1-220ENST00000630147 KRTAP1-4P0C5Y4 121 aa6.31□□□□□ -1.4
SPTAN1-220ENST00000630147 UBE2D1P51668 147 aa6.31□□□□□ -1.4
SPTAN1-220ENST00000630147 SEC61GP60059 68 aa6.31□□□□□ -1.4
SPTAN1-220ENST00000630147 PMVKQ15126 192 aa6.31□□□□□ -1.4
SPTAN1-220ENST00000630147 FAM19A5Q7Z5A7 132 aaPredicted RBP6.31□□□□□ -1.4
SPTAN1-220ENST00000630147 C5orf38Q86SI9 138 aa6.31□□□□□ -1.4
SPTAN1-220ENST00000630147 PPDPFLQ8WWR9 84 aa6.31□□□□□ -1.4
SPTAN1-220ENST00000630147 C11orf52Q96A22 123 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms