RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 HERVK_113P63121 156 aa4.97□□□□□ -1.61
CCDC163-204ENST00000628293 PMVKQ15126 192 aa4.97□□□□□ -1.61
CCDC163-204ENST00000628293 CHCHD1Q96BP2 118 aaKnown RBP4.97□□□□□ -1.61
CCDC163-204ENST00000628293 MRPL35Q9NZE8 188 aaKnown RBP4.97□□□□□ -1.61
CCDC163-204ENST00000628293 PLAC8Q9NZF1 115 aa4.97□□□□□ -1.61
CCDC163-204ENST00000628293 C6orf48Q9UBA6 75 aa4.97□□□□□ -1.61
CCDC163-204ENST00000628293 MYCBP2O75592 4640 aa4.96□□□□□ -1.61
CCDC163-204ENST00000628293 SMIM1B2RUZ4 78 aa4.96□□□□□ -1.62
CCDC163-204ENST00000628293 F8WDY8 70 aa4.96□□□□□ -1.62
CCDC163-204ENST00000628293 IGLC3P0DOY3 106 aa4.96□□□□□ -1.62
CCDC163-204ENST00000628293 PTTG1IPP53801 180 aa4.96□□□□□ -1.62
CCDC163-204ENST00000628293 SEC11AP67812 179 aa4.96□□□□□ -1.62
CCDC163-204ENST00000628293 RNF151Q2KHN1 245 aa4.96□□□□□ -1.62
CCDC163-204ENST00000628293 C2orf82Q6UX34 121 aa4.96□□□□□ -1.62
CCDC163-204ENST00000628293 UNQ6190/PRO20217Q6UXQ8 127 aa4.96□□□□□ -1.62
CCDC163-204ENST00000628293 LOC107984640A0A0U1RRK4 108 aa4.95□□□□□ -1.62
CCDC163-204ENST00000628293 NDUFA1O15239 70 aa4.95□□□□□ -1.62
CCDC163-204ENST00000628293 NUPR1O60356 82 aa4.95□□□□□ -1.62
CCDC163-204ENST00000628293 SERF1AO75920 110 aa4.95□□□□□ -1.62
CCDC163-204ENST00000628293 TLX1NBP0CAT3 122 aa4.95□□□□□ -1.62
CCDC163-204ENST00000628293 MAJINQ3KP22 176 aa4.95□□□□□ -1.62
CCDC163-204ENST00000628293 Q8IZM0 81 aa4.95□□□□□ -1.62
CCDC163-204ENST00000628293 LINC00469Q8N7U9 141 aa4.95□□□□□ -1.62
CCDC163-204ENST00000628293 GEMIN7Q9H840 131 aaKnown RBP4.95□□□□□ -1.62
CCDC163-204ENST00000628293 C11orf86A6NJI1 115 aa4.94□□□□□ -1.62
CCDC163-204ENST00000628293 ATP5LO75964 103 aa4.94□□□□□ -1.62
CCDC163-204ENST00000628293 ZNF22P17026 224 aaPredicted RBP4.94□□□□□ -1.62
CCDC163-204ENST00000628293 BAGE3Q86Y29 109 aa4.94□□□□□ -1.62
CCDC163-204ENST00000628293 FAM19A2Q8N3H0 131 aa4.94□□□□□ -1.62
CCDC163-204ENST00000628293 STPG4Q8N801 248 aa4.94□□□□□ -1.62
CCDC163-204ENST00000628293 IGLV5-39A0A0G2JS06 123 aa4.93□□□□□ -1.62
CCDC163-204ENST00000628293 TRBV30A0A0K0K1B3 111 aa4.93□□□□□ -1.62
CCDC163-204ENST00000628293 A0A1W2PNN7 141 aa4.93□□□□□ -1.62
CCDC163-204ENST00000628293 HSBP1O75506 76 aa4.93□□□□□ -1.62
CCDC163-204ENST00000628293 PLA2G1BP04054 148 aaKnown RBP4.93□□□□□ -1.62
CCDC163-204ENST00000628293 SPINK8P0C7L1 97 aa4.93□□□□□ -1.62
CCDC163-204ENST00000628293 INAFM2P0DMQ5 153 aa4.93□□□□□ -1.62
CCDC163-204ENST00000628293 HNRNPA3P51991 378 aaKnown RBP4.93□□□□□ -1.62
CCDC163-204ENST00000628293 RPL18AQ02543 176 aaKnown RBP4.93□□□□□ -1.62
CCDC163-204ENST00000628293 GAGE2BQ13066 116 aa4.93□□□□□ -1.62
CCDC163-204ENST00000628293 C9orf116Q5BN46 136 aaPredicted RBP4.93□□□□□ -1.62
CCDC163-204ENST00000628293 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
CCDC163-204ENST00000628293 Q6ZRP5 223 aa4.93□□□□□ -1.62
CCDC163-204ENST00000628293 IFI27L1Q96BM0 104 aa4.93□□□□□ -1.62
CCDC163-204ENST00000628293 TOMM7Q9P0U1 55 aa4.93□□□□□ -1.62
CCDC163-204ENST00000628293 PKIGQ9Y2B9 76 aa4.93□□□□□ -1.62
CCDC163-204ENST00000628293 TRAV12-1A0A0B4J245 112 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 HIST1H2BKO60814 126 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 HIST1H2BJP06899 126 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 HIST1H2BOP23527 126 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 HIST1H2BBP33778 126 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 NDUFA6P56556 154 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 HIST1H2BDP58876 126 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 RPL37AP61513 92 aaKnown RBP4.92□□□□□ -1.62
CCDC163-204ENST00000628293 HIST1H2BCP62807 126 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 HIST2H2BEQ16778 126 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.92□□□□□ -1.62
CCDC163-204ENST00000628293 KRTAP7-1Q8IUC3 87 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 HIST1H2BHQ93079 126 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 PACRGQ96M98 296 aaPredicted RBP4.92□□□□□ -1.62
CCDC163-204ENST00000628293 HIST1H2BNQ99877 126 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 HIST1H2BMQ99879 126 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 LINC00474Q9P2X8 69 aa4.92□□□□□ -1.62
CCDC163-204ENST00000628293 LRP1Q07954 4544 aaKnown RBP4.92□□□□□ -1.62
CCDC163-204ENST00000628293 FAT3Q8TDW7 4589 aa4.91□□□□□ -1.62
CCDC163-204ENST00000628293 DMBT1Q9UGM3 2413 aaPredicted RBP4.91□□□□□ -1.62
CCDC163-204ENST00000628293 FAM168BA1KXE4 195 aa4.91□□□□□ -1.62
CCDC163-204ENST00000628293 PRSS2P07478 247 aa4.91□□□□□ -1.62
CCDC163-204ENST00000628293 C6orf226Q5I0X4 101 aa4.91□□□□□ -1.62
CCDC163-204ENST00000628293 COX7B2Q8TF08 81 aa4.91□□□□□ -1.62
CCDC163-204ENST00000628293 DPH3Q96FX2 82 aa4.91□□□□□ -1.62
CCDC163-204ENST00000628293 CHTOPQ9Y3Y2 248 aaKnown RBP4.91□□□□□ -1.62
CCDC163-204ENST00000628293 NDUFC2-KCTD14E9PQ53 114 aa4.9□□□□□ -1.63
CCDC163-204ENST00000628293 F8VRH5 84 aa4.9□□□□□ -1.63
CCDC163-204ENST00000628293 H3BRM9 83 aa4.9□□□□□ -1.63
CCDC163-204ENST00000628293 ATP6V1G1O75348 118 aa4.9□□□□□ -1.63
CCDC163-204ENST00000628293 CXCL5P42830 114 aa4.9□□□□□ -1.63
CCDC163-204ENST00000628293 CKS1BP61024 79 aa4.9□□□□□ -1.63
CCDC163-204ENST00000628293 ODF1Q14990 250 aa4.9□□□□□ -1.63
CCDC163-204ENST00000628293 C9orf129Q5T035 196 aaKnown RBP4.9□□□□□ -1.63
CCDC163-204ENST00000628293 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
CCDC163-204ENST00000628293 LEPROTL1O95214 131 aa4.89□□□□□ -1.63
CCDC163-204ENST00000628293 PRR3P79522 188 aaKnown RBP4.89□□□□□ -1.63
CCDC163-204ENST00000628293 GAGE2EQ4V326 116 aa4.89□□□□□ -1.63
CCDC163-204ENST00000628293 GAGE2DQ9UEU5 116 aa4.89□□□□□ -1.63
CCDC163-204ENST00000628293 HERC1Q15751 4861 aa4.88□□□□□ -1.63
CCDC163-204ENST00000628293 TMEM223A0PJW6 202 aa4.88□□□□□ -1.63
CCDC163-204ENST00000628293 TMEM170BQ5T4T1 132 aa4.88□□□□□ -1.63
CCDC163-204ENST00000628293 PHF5AQ7RTV0 110 aaKnown RBP4.88□□□□□ -1.63
CCDC163-204ENST00000628293 KRTAP11-1Q8IUC1 163 aa4.88□□□□□ -1.63
CCDC163-204ENST00000628293 C7orf33Q8WU49 177 aa4.88□□□□□ -1.63
CCDC163-204ENST00000628293 FABP4P15090 132 aa4.87□□□□□ -1.63
CCDC163-204ENST00000628293 S100A1P23297 94 aa4.87□□□□□ -1.63
CCDC163-204ENST00000628293 COA6Q5JTJ3 125 aaKnown RBP4.87□□□□□ -1.63
CCDC163-204ENST00000628293 SERTAD4-AS1Q5TG53 156 aa4.87□□□□□ -1.63
CCDC163-204ENST00000628293 FAM19A5Q7Z5A7 132 aaPredicted RBP4.87□□□□□ -1.63
CCDC163-204ENST00000628293 ZNF625Q96I27 306 aaPredicted RBP4.87□□□□□ -1.63
CCDC163-204ENST00000628293 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
CCDC163-204ENST00000628293 XAGE1AQ9HD64 81 aa4.87□□□□□ -1.63
CCDC163-204ENST00000628293 H0Y8G0 127 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms