RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 TRAV8-4A0A0B4J246 113 aa6.68□□□□□ -1.34
SOX2-OT-244ENST00000627738 COX7A2LO14548 114 aa6.68□□□□□ -1.34
SOX2-OT-244ENST00000627738 KRTAP10-2P60368 255 aa6.68□□□□□ -1.34
SOX2-OT-244ENST00000627738 FOXI1Q12951 378 aa6.68□□□□□ -1.34
SOX2-OT-244ENST00000627738 MIAQ16674 131 aa6.68□□□□□ -1.34
SOX2-OT-244ENST00000627738 ZFAND6Q6FIF0 208 aa6.68□□□□□ -1.34
SOX2-OT-244ENST00000627738 SCGB1D4Q6XE38 83 aa6.68□□□□□ -1.34
SOX2-OT-244ENST00000627738 UBE2DNLQ8IWF7 75 aa6.68□□□□□ -1.34
SOX2-OT-244ENST00000627738 HIGD1BQ9P298 99 aa6.68□□□□□ -1.34
SOX2-OT-244ENST00000627738 NDUFA12Q9UI09 145 aa6.68□□□□□ -1.34
SOX2-OT-244ENST00000627738 LINC01561Q8N1V8 128 aa6.67□□□□□ -1.34
SOX2-OT-244ENST00000627738 C10orf126Q8N4M7 172 aa6.67□□□□□ -1.34
SOX2-OT-244ENST00000627738 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
SOX2-OT-244ENST00000627738 Q9H8V8 135 aa6.67□□□□□ -1.34
SOX2-OT-244ENST00000627738 TOMM7Q9P0U1 55 aa6.67□□□□□ -1.34
SOX2-OT-244ENST00000627738 M0R143 59 aa6.66□□□□□ -1.34
SOX2-OT-244ENST00000627738 NDUFA1O15239 70 aa6.66□□□□□ -1.34
SOX2-OT-244ENST00000627738 HINT1P49773 126 aaPredicted RBP6.66□□□□□ -1.34
SOX2-OT-244ENST00000627738 SNHG12Q9BXW3 62 aa6.66□□□□□ -1.34
SOX2-OT-244ENST00000627738 STAB2Q8WWQ8 2551 aa6.66□□□□□ -1.34
SOX2-OT-244ENST00000627738 VPS13DQ5THJ4 4388 aa6.66□□□□□ -1.34
SOX2-OT-244ENST00000627738 CSMD3Q7Z407 3707 aa6.66□□□□□ -1.34
SOX2-OT-244ENST00000627738 IGKV2D-24A0A075B6R9 120 aa6.65□□□□□ -1.34
SOX2-OT-244ENST00000627738 A0A0J9YXY3 114 aa6.65□□□□□ -1.34
SOX2-OT-244ENST00000627738 IBA57-AS1B1ANH7 110 aa6.65□□□□□ -1.34
SOX2-OT-244ENST00000627738 HSD52Q0P140 79 aa6.65□□□□□ -1.34
SOX2-OT-244ENST00000627738 BATFQ16520 125 aa6.65□□□□□ -1.34
SOX2-OT-244ENST00000627738 Q9HAA7 133 aa6.65□□□□□ -1.34
SOX2-OT-244ENST00000627738 LYSTQ99698 3801 aa6.65□□□□□ -1.35
SOX2-OT-244ENST00000627738 BVES-AS1Q5T3Y7 98 aa6.64□□□□□ -1.35
SOX2-OT-244ENST00000627738 KRTAP26-1Q6PEX3 210 aa6.64□□□□□ -1.35
SOX2-OT-244ENST00000627738 MUC7Q8TAX7 377 aa6.64□□□□□ -1.35
SOX2-OT-244ENST00000627738 ORAOV1Q8WV07 137 aa6.64□□□□□ -1.35
SOX2-OT-244ENST00000627738 ZNF625Q96I27 306 aaPredicted RBP6.64□□□□□ -1.35
SOX2-OT-244ENST00000627738 TRIAP1O43715 76 aa6.63□□□□□ -1.35
SOX2-OT-244ENST00000627738 APOMO95445 188 aa6.63□□□□□ -1.35
SOX2-OT-244ENST00000627738 PRSS2P07478 247 aa6.63□□□□□ -1.35
SOX2-OT-244ENST00000627738 TAL2Q16559 108 aa6.63□□□□□ -1.35
SOX2-OT-244ENST00000627738 C6orf226Q5I0X4 101 aa6.63□□□□□ -1.35
SOX2-OT-244ENST00000627738 Q8IZM0 81 aa6.63□□□□□ -1.35
SOX2-OT-244ENST00000627738 HIST1H4GQ99525 98 aa6.63□□□□□ -1.35
SOX2-OT-244ENST00000627738 SRSF9Q13242 221 aaKnown RBP eCLIP6.62□□□□□ -1.35
SOX2-OT-244ENST00000627738 KIAA0087Q14695 138 aa6.62□□□□□ -1.35
SOX2-OT-244ENST00000627738 CFAP161Q6P656 301 aa6.62□□□□□ -1.35
SOX2-OT-244ENST00000627738 CEND1Q8N111 149 aa6.62□□□□□ -1.35
SOX2-OT-244ENST00000627738 SPANXB1Q9NS25 103 aaPredicted RBP6.62□□□□□ -1.35
SOX2-OT-244ENST00000627738 FBN3Q75N90 2809 aa6.61□□□□□ -1.35
SOX2-OT-244ENST00000627738 TMEM238C9JI98 176 aa6.61□□□□□ -1.35
SOX2-OT-244ENST00000627738 K7EP13 123 aa6.61□□□□□ -1.35
SOX2-OT-244ENST00000627738 HERV-K104P63124 156 aa6.61□□□□□ -1.35
SOX2-OT-244ENST00000627738 MEIG1Q5JSS6 88 aa6.61□□□□□ -1.35
SOX2-OT-244ENST00000627738 LITAFQ99732 161 aa6.61□□□□□ -1.35
SOX2-OT-244ENST00000627738 KRTAP1-5Q9BYS1 174 aa6.61□□□□□ -1.35
SOX2-OT-244ENST00000627738 A0A0U1RRA0 63 aa6.6□□□□□ -1.35
SOX2-OT-244ENST00000627738 FXYD2P54710 66 aa6.6□□□□□ -1.35
SOX2-OT-244ENST00000627738 SPAG11BQ08648 103 aa6.6□□□□□ -1.35
SOX2-OT-244ENST00000627738 ADAMTSL4-AS1Q5T5F5 129 aa6.6□□□□□ -1.35
SOX2-OT-244ENST00000627738 C2orf82Q6UX34 121 aa6.6□□□□□ -1.35
SOX2-OT-244ENST00000627738 RMI2Q96E14 147 aa6.6□□□□□ -1.35
SOX2-OT-244ENST00000627738 TM2D2Q9BX73 214 aa6.6□□□□□ -1.35
SOX2-OT-244ENST00000627738 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
SOX2-OT-244ENST00000627738 DNAH10Q8IVF4 4471 aa6.6□□□□□ -1.35
SOX2-OT-244ENST00000627738 TIMM17BO60830 172 aa6.59□□□□□ -1.35
SOX2-OT-244ENST00000627738 SMIM13P0DJ93 91 aa6.59□□□□□ -1.35
SOX2-OT-244ENST00000627738 CXCL5P42830 114 aa6.59□□□□□ -1.35
SOX2-OT-244ENST00000627738 CKS1BP61024 79 aa6.59□□□□□ -1.35
SOX2-OT-244ENST00000627738 CIRBPQ14011 172 aaKnown RBP6.59□□□□□ -1.35
SOX2-OT-244ENST00000627738 SFTA2Q6UW10 78 aa6.59□□□□□ -1.35
SOX2-OT-244ENST00000627738 C6orf223Q8N319 242 aa6.59□□□□□ -1.35
SOX2-OT-244ENST00000627738 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
SOX2-OT-244ENST00000627738 NBDYA0A0U1RRE5 68 aa6.58□□□□□ -1.36
SOX2-OT-244ENST00000627738 HIGD2BQ4VC39 106 aa6.58□□□□□ -1.36
SOX2-OT-244ENST00000627738 CASC10Q5T4H9 136 aa6.58□□□□□ -1.36
SOX2-OT-244ENST00000627738 KRTAP5-3Q6L8H2 238 aa6.58□□□□□ -1.36
SOX2-OT-244ENST00000627738 DAND5Q8N907 189 aa6.58□□□□□ -1.36
SOX2-OT-244ENST00000627738 C15orf56Q8N910 161 aa6.58□□□□□ -1.36
SOX2-OT-244ENST00000627738 SPANXDQ9BXN6 97 aa6.58□□□□□ -1.36
SOX2-OT-244ENST00000627738 SPANXCQ9NY87 97 aa6.58□□□□□ -1.36
SOX2-OT-244ENST00000627738 NPC2P61916 151 aa6.57□□□□□ -1.36
SOX2-OT-244ENST00000627738 LBHQ53QV2 105 aaPredicted RBP6.57□□□□□ -1.36
SOX2-OT-244ENST00000627738 COL5A1-AS1Q5SY13 56 aa6.57□□□□□ -1.36
SOX2-OT-244ENST00000627738 MUSTN1Q8IVN3 82 aa6.57□□□□□ -1.36
SOX2-OT-244ENST00000627738 NTN5Q8WTR8 489 aaPredicted RBP6.57□□□□□ -1.36
SOX2-OT-244ENST00000627738 A6NDN8 102 aa6.56□□□□□ -1.36
SOX2-OT-244ENST00000627738 PFN2P35080 140 aa6.56□□□□□ -1.36
SOX2-OT-244ENST00000627738 LINC00158P58513 81 aa6.56□□□□□ -1.36
SOX2-OT-244ENST00000627738 TTC32Q5I0X7 151 aa6.56□□□□□ -1.36
SOX2-OT-244ENST00000627738 C10orf25Q5T742 122 aa6.56□□□□□ -1.36
SOX2-OT-244ENST00000627738 UNQ6190/PRO20217Q6UXQ8 127 aa6.56□□□□□ -1.36
SOX2-OT-244ENST00000627738 Q6ZVH6 145 aa6.56□□□□□ -1.36
SOX2-OT-244ENST00000627738 ERG28Q9UKR5 140 aa6.56□□□□□ -1.36
SOX2-OT-244ENST00000627738 COX11Q9Y6N1 276 aa6.56□□□□□ -1.36
SOX2-OT-244ENST00000627738 DNAH6Q9C0G6 4158 aa6.55□□□□□ -1.36
SOX2-OT-244ENST00000627738 ALMS1Q8TCU4 4167 aa6.55□□□□□ -1.36
SOX2-OT-244ENST00000627738 GVQW2A0A096LPI5 108 aaPredicted RBP6.55□□□□□ -1.36
SOX2-OT-244ENST00000627738 MIR7-3HGQ8N6C7 128 aa6.55□□□□□ -1.36
SOX2-OT-244ENST00000627738 NHP2Q9NX24 153 aaKnown RBP6.55□□□□□ -1.36
SOX2-OT-244ENST00000627738 A4D1N5 150 aa6.54□□□□□ -1.36
SOX2-OT-244ENST00000627738 USP17L23D6RBM5 183 aa6.54□□□□□ -1.36
SOX2-OT-244ENST00000627738 C3orf84H3BNL1 204 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms