RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 BVES-AS1Q5T3Y7 98 aa5.07□□□□□ -1.6
PTP4A1-206ENST00000627002 CFAP161Q6P656 301 aa5.07□□□□□ -1.6
PTP4A1-206ENST00000627002 MUC7Q8TAX7 377 aa5.07□□□□□ -1.6
PTP4A1-206ENST00000627002 ZNF625Q96I27 306 aaPredicted RBP5.07□□□□□ -1.6
PTP4A1-206ENST00000627002 SNHG12Q9BXW3 62 aa5.07□□□□□ -1.6
PTP4A1-206ENST00000627002 TOMM7Q9P0U1 55 aa5.07□□□□□ -1.6
PTP4A1-206ENST00000627002 BATFQ16520 125 aa5.06□□□□□ -1.6
PTP4A1-206ENST00000627002 Q6ZVH6 145 aa5.06□□□□□ -1.6
PTP4A1-206ENST00000627002 ORAOV1Q8WV07 137 aa5.06□□□□□ -1.6
PTP4A1-206ENST00000627002 IGKV2D-24A0A075B6R9 120 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 A6NDN8 102 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 GCSHP23434 173 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 CKS1BP61024 79 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 TTC32Q5I0X7 151 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 COL5A1-AS1Q5SY13 56 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 KRTAP26-1Q6PEX3 210 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 CEND1Q8N111 149 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 TM2D2Q9BX73 214 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 SPANXDQ9BXN6 97 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 Q9HAA7 133 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 SPANXCQ9NY87 97 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 COX11Q9Y6N1 276 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 COL7A1Q02388 2944 aa5.05□□□□□ -1.6
PTP4A1-206ENST00000627002 DNAH9Q9NYC9 4486 aa5.04□□□□□ -1.6
PTP4A1-206ENST00000627002 TMEM238LA0A1B0GVL6 79 aa5.04□□□□□ -1.6
PTP4A1-206ENST00000627002 IFITM1P13164 125 aa5.04□□□□□ -1.6
PTP4A1-206ENST00000627002 PTTG1IPP53801 180 aa5.04□□□□□ -1.6
PTP4A1-206ENST00000627002 SPAG11BQ08648 103 aa5.04□□□□□ -1.6
PTP4A1-206ENST00000627002 KIAA0087Q14695 138 aa5.04□□□□□ -1.6
PTP4A1-206ENST00000627002 MEIG1Q5JSS6 88 aa5.04□□□□□ -1.6
PTP4A1-206ENST00000627002 COPS9Q8WXC6 57 aa5.04□□□□□ -1.6
PTP4A1-206ENST00000627002 F8WDY8 70 aa5.03□□□□□ -1.6
PTP4A1-206ENST00000627002 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
PTP4A1-206ENST00000627002 LITAFQ99732 161 aa5.03□□□□□ -1.6
PTP4A1-206ENST00000627002 ZNF561-AS1K7EIQ3 104 aa5.02□□□□□ -1.61
PTP4A1-206ENST00000627002 FXYD2P54710 66 aa5.02□□□□□ -1.61
PTP4A1-206ENST00000627002 RPL24P83731 157 aaKnown RBP5.02□□□□□ -1.61
PTP4A1-206ENST00000627002 CASC10Q5T4H9 136 aa5.02□□□□□ -1.61
PTP4A1-206ENST00000627002 PPDPFQ9H3Y8 114 aa5.02□□□□□ -1.61
PTP4A1-206ENST00000627002 NBDYA0A0U1RRE5 68 aa5.01□□□□□ -1.61
PTP4A1-206ENST00000627002 SMIM13P0DJ93 91 aa5.01□□□□□ -1.61
PTP4A1-206ENST00000627002 LINC00158P58513 81 aa5.01□□□□□ -1.61
PTP4A1-206ENST00000627002 COX17Q14061 63 aa5.01□□□□□ -1.61
PTP4A1-206ENST00000627002 ADAMTSL4-AS1Q5T5F5 129 aa5.01□□□□□ -1.61
PTP4A1-206ENST00000627002 MUSTN1Q8IVN3 82 aa5.01□□□□□ -1.61
PTP4A1-206ENST00000627002 NTN5Q8WTR8 489 aaPredicted RBP5.01□□□□□ -1.61
PTP4A1-206ENST00000627002 C2orf48Q96LS8 159 aa5.01□□□□□ -1.61
PTP4A1-206ENST00000627002 ERG28Q9UKR5 140 aa5.01□□□□□ -1.61
PTP4A1-206ENST00000627002 STAB2Q8WWQ8 2551 aa5□□□□□ -1.61
PTP4A1-206ENST00000627002 GVQW2A0A096LPI5 108 aaPredicted RBP5□□□□□ -1.61
PTP4A1-206ENST00000627002 TRAV16A0A0A6YYK6 109 aaPredicted RBP5□□□□□ -1.61
PTP4A1-206ENST00000627002 A0A1B0GWB2 263 aa5□□□□□ -1.61
PTP4A1-206ENST00000627002 C2orf82Q6UX34 121 aa5□□□□□ -1.61
PTP4A1-206ENST00000627002 C15orf56Q8N910 161 aa5□□□□□ -1.61
PTP4A1-206ENST00000627002 KRTAP1-5Q9BYS1 174 aa5□□□□□ -1.61
PTP4A1-206ENST00000627002 NHP2Q9NX24 153 aaKnown RBP5□□□□□ -1.61
PTP4A1-206ENST00000627002 TRBV30A0A0K0K1B3 111 aa4.99□□□□□ -1.61
PTP4A1-206ENST00000627002 A0A0U1RRA0 63 aa4.99□□□□□ -1.61
PTP4A1-206ENST00000627002 LCE6AA0A183 80 aa4.99□□□□□ -1.61
PTP4A1-206ENST00000627002 PSCAO43653 123 aa4.99□□□□□ -1.61
PTP4A1-206ENST00000627002 PFN2P35080 140 aa4.99□□□□□ -1.61
PTP4A1-206ENST00000627002 HIGD2BQ4VC39 106 aa4.99□□□□□ -1.61
PTP4A1-206ENST00000627002 UNQ6190/PRO20217Q6UXQ8 127 aa4.99□□□□□ -1.61
PTP4A1-206ENST00000627002 C6orf223Q8N319 242 aa4.99□□□□□ -1.61
PTP4A1-206ENST00000627002 MIR7-3HGQ8N6C7 128 aa4.99□□□□□ -1.61
PTP4A1-206ENST00000627002 DAND5Q8N907 189 aa4.99□□□□□ -1.61
PTP4A1-206ENST00000627002 LINC00308Q8TCZ7 52 aa4.99□□□□□ -1.61
PTP4A1-206ENST00000627002 CAMK2N2Q96S95 79 aa4.99□□□□□ -1.61
PTP4A1-206ENST00000627002 A0A0B4J2C4 111 aa4.98□□□□□ -1.61
PTP4A1-206ENST00000627002 A4D1N5 150 aa4.98□□□□□ -1.61
PTP4A1-206ENST00000627002 USP17L23D6RBM5 183 aa4.98□□□□□ -1.61
PTP4A1-206ENST00000627002 TAX1BP3O14907 124 aa4.98□□□□□ -1.61
PTP4A1-206ENST00000627002 DNAH7Q8WXX0 4024 aa4.98□□□□□ -1.61
PTP4A1-206ENST00000627002 DYNC2H1Q8NCM8 4307 aaKnown RBP4.97□□□□□ -1.61
PTP4A1-206ENST00000627002 CFC1BP0CG36 223 aa4.97□□□□□ -1.61
PTP4A1-206ENST00000627002 CFC1P0CG37 223 aa4.97□□□□□ -1.61
PTP4A1-206ENST00000627002 NPC2P61916 151 aa4.97□□□□□ -1.61
PTP4A1-206ENST00000627002 SYCNQ0VAF6 134 aa4.97□□□□□ -1.61
PTP4A1-206ENST00000627002 C14orf177Q52M58 125 aa4.97□□□□□ -1.61
PTP4A1-206ENST00000627002 C10orf25Q5T742 122 aa4.97□□□□□ -1.61
PTP4A1-206ENST00000627002 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
PTP4A1-206ENST00000627002 RAB37Q96AX2 223 aa4.97□□□□□ -1.61
PTP4A1-206ENST00000627002 LINC00526Q96FQ7 95 aa4.97□□□□□ -1.61
PTP4A1-206ENST00000627002 BIRC6Q9NR09 4857 aa4.97□□□□□ -1.61
PTP4A1-206ENST00000627002 LOC107984156A0A0G2JMH3 177 aa4.96□□□□□ -1.62
PTP4A1-206ENST00000627002 K7ERJ3 54 aa4.96□□□□□ -1.62
PTP4A1-206ENST00000627002 RNF151Q2KHN1 245 aa4.96□□□□□ -1.62
PTP4A1-206ENST00000627002 C9orf116Q5BN46 136 aaPredicted RBP4.96□□□□□ -1.62
PTP4A1-206ENST00000627002 SOSTDC1Q6X4U4 206 aa4.96□□□□□ -1.62
PTP4A1-206ENST00000627002 Q6ZRU5 148 aa4.96□□□□□ -1.62
PTP4A1-206ENST00000627002 ARL17AQ8IVW1 177 aa4.96□□□□□ -1.62
PTP4A1-206ENST00000627002 CARD19Q96LW7 228 aa4.96□□□□□ -1.62
PTP4A1-206ENST00000627002 C6orf48Q9UBA6 75 aa4.96□□□□□ -1.62
PTP4A1-206ENST00000627002 PRO1854Q9UHT4 67 aa4.96□□□□□ -1.62
PTP4A1-206ENST00000627002 C9orf118A6NHY6 69 aa4.95□□□□□ -1.62
PTP4A1-206ENST00000627002 LY6G6CO95867 125 aa4.95□□□□□ -1.62
PTP4A1-206ENST00000627002 Q6ZR54 194 aa4.95□□□□□ -1.62
PTP4A1-206ENST00000627002 LINC00476Q8WZB0 136 aa4.95□□□□□ -1.62
PTP4A1-206ENST00000627002 SND1-IT1Q9HBX3 110 aa4.95□□□□□ -1.62
PTP4A1-206ENST00000627002 TRAV13-2A0A0B4J235 113 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms