RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 TOMM6Q96B49 74 aa8.05□□□□□ -1.12
SOX2-OT-241ENST00000626948 K7EMI3 77 aa8.04□□□□□ -1.12
SOX2-OT-241ENST00000626948 C6orf226Q5I0X4 101 aa8.04□□□□□ -1.12
SOX2-OT-241ENST00000626948 TIMM17AQ99595 171 aa8.04□□□□□ -1.12
SOX2-OT-241ENST00000626948 ALKBH7Q9BT30 221 aaPredicted RBP8.04□□□□□ -1.12
SOX2-OT-241ENST00000626948 NXT2Q9NPJ8 142 aaKnown RBP8.04□□□□□ -1.12
SOX2-OT-241ENST00000626948 SMIM1B2RUZ4 78 aa8.03□□□□□ -1.12
SOX2-OT-241ENST00000626948 ZNF861PO60384 105 aa8.03□□□□□ -1.12
SOX2-OT-241ENST00000626948 CTDSP1Q9GZU7 261 aa8.03□□□□□ -1.12
SOX2-OT-241ENST00000626948 PRSS2P07478 247 aa8.02□□□□□ -1.13
SOX2-OT-241ENST00000626948 CKS1BP61024 79 aa8.02□□□□□ -1.13
SOX2-OT-241ENST00000626948 HERVK_113P63121 156 aa8.02□□□□□ -1.13
SOX2-OT-241ENST00000626948 IGLV5-45A0A087WSX0 123 aa8.01□□□□□ -1.13
SOX2-OT-241ENST00000626948 LINC01546A6NGU7 62 aa8.01□□□□□ -1.13
SOX2-OT-241ENST00000626948 F8VRH5 84 aa8.01□□□□□ -1.13
SOX2-OT-241ENST00000626948 IFITM2Q01629 132 aa8.01□□□□□ -1.13
SOX2-OT-241ENST00000626948 CLLU1Q5K131 121 aa8.01□□□□□ -1.13
SOX2-OT-241ENST00000626948 A0A087X002 238 aa8□□□□□ -1.13
SOX2-OT-241ENST00000626948 ERASQ7Z444 233 aa8□□□□□ -1.13
SOX2-OT-241ENST00000626948 TINCRA0A1B0GVN0 87 aa7.98□□□□□ -1.13
SOX2-OT-241ENST00000626948 TMEM218A2RU14 115 aa7.98□□□□□ -1.13
SOX2-OT-241ENST00000626948 NUPR1O60356 82 aa7.98□□□□□ -1.13
SOX2-OT-241ENST00000626948 RAB14P61106 215 aa7.98□□□□□ -1.13
SOX2-OT-241ENST00000626948 MRPL55Q7Z7F7 128 aaKnown RBP7.98□□□□□ -1.13
SOX2-OT-241ENST00000626948 LINC00167Q96N53 147 aa7.98□□□□□ -1.13
SOX2-OT-241ENST00000626948 SCGB3A1Q96QR1 104 aa7.98□□□□□ -1.13
SOX2-OT-241ENST00000626948 GEMIN7Q9H840 131 aaKnown RBP7.98□□□□□ -1.13
SOX2-OT-241ENST00000626948 TP73-AS1Q9UF72 201 aa7.98□□□□□ -1.13
SOX2-OT-241ENST00000626948 CARHSP1Q9Y2V2 147 aaKnown RBP7.98□□□□□ -1.13
SOX2-OT-241ENST00000626948 RPL37AP8A6NKH3 93 aa7.97□□□□□ -1.13
SOX2-OT-241ENST00000626948 SPINK8P0C7L1 97 aa7.97□□□□□ -1.13
SOX2-OT-241ENST00000626948 SEC11AP67812 179 aa7.97□□□□□ -1.13
SOX2-OT-241ENST00000626948 PDZD11Q5EBL8 140 aa7.97□□□□□ -1.13
SOX2-OT-241ENST00000626948 KRTAP13-1Q8IUC0 172 aa7.97□□□□□ -1.13
SOX2-OT-241ENST00000626948 COX7B2Q8TF08 81 aa7.97□□□□□ -1.13
SOX2-OT-241ENST00000626948 CST9LQ9H4G1 147 aa7.97□□□□□ -1.13
SOX2-OT-241ENST00000626948 ANAPC11Q9NYG5 84 aa7.97□□□□□ -1.13
SOX2-OT-241ENST00000626948 A0A096LNJ9 63 aa7.96□□□□□ -1.14
SOX2-OT-241ENST00000626948 SCO1O75880 301 aa7.96□□□□□ -1.14
SOX2-OT-241ENST00000626948 PAPPA-AS1Q5QFB9 102 aa7.96□□□□□ -1.14
SOX2-OT-241ENST00000626948 URB1-AS1Q96HZ7 61 aa7.96□□□□□ -1.14
SOX2-OT-241ENST00000626948 TMA7Q9Y2S6 64 aaKnown RBP7.96□□□□□ -1.14
SOX2-OT-241ENST00000626948 TRAV9-1A0A075B6T8 112 aa7.95□□□□□ -1.14
SOX2-OT-241ENST00000626948 BCE1O60756 84 aa7.95□□□□□ -1.14
SOX2-OT-241ENST00000626948 RPL13AP40429 203 aaKnown RBP7.95□□□□□ -1.14
SOX2-OT-241ENST00000626948 CXCL5P42830 114 aa7.95□□□□□ -1.14
SOX2-OT-241ENST00000626948 LBHQ53QV2 105 aaPredicted RBP7.95□□□□□ -1.14
SOX2-OT-241ENST00000626948 GNB1LQ9BYB4 327 aa7.95□□□□□ -1.14
SOX2-OT-241ENST00000626948 IGLV5-37A0A075B6J1 123 aa7.94□□□□□ -1.14
SOX2-OT-241ENST00000626948 GAGE10A6NGK3 116 aa7.94□□□□□ -1.14
SOX2-OT-241ENST00000626948 RAB5BP61020 215 aa7.94□□□□□ -1.14
SOX2-OT-241ENST00000626948 PRR4Q16378 134 aa7.94□□□□□ -1.14
SOX2-OT-241ENST00000626948 KRTAP13-2Q52LG2 175 aa7.94□□□□□ -1.14
SOX2-OT-241ENST00000626948 Q8NDZ9 215 aa7.94□□□□□ -1.14
SOX2-OT-241ENST00000626948 TSPAN13O95857 204 aa7.93□□□□□ -1.14
SOX2-OT-241ENST00000626948 G0S2P27469 103 aa7.93□□□□□ -1.14
SOX2-OT-241ENST00000626948 UQCC3Q6UW78 93 aa7.93□□□□□ -1.14
SOX2-OT-241ENST00000626948 MUC17Q685J3 4493 aa7.92□□□□□ -1.14
SOX2-OT-241ENST00000626948 IGLV5-39A0A0G2JS06 123 aa7.92□□□□□ -1.14
SOX2-OT-241ENST00000626948 A6NJY4 79 aa7.92□□□□□ -1.14
SOX2-OT-241ENST00000626948 PMVKQ15126 192 aa7.92□□□□□ -1.14
SOX2-OT-241ENST00000626948 SEC11CQ9BY50 192 aa7.92□□□□□ -1.14
SOX2-OT-241ENST00000626948 RPL28P46779 137 aaKnown RBP7.91□□□□□ -1.14
SOX2-OT-241ENST00000626948 C10orf91Q5T1B1 145 aa7.91□□□□□ -1.14
SOX2-OT-241ENST00000626948 MRPL18Q9H0U6 180 aaKnown RBP7.91□□□□□ -1.14
SOX2-OT-241ENST00000626948 FAT4Q6V0I7 4981 aa7.9□□□□□ -1.14
SOX2-OT-241ENST00000626948 IGLC3P0DOY3 106 aa7.9□□□□□ -1.14
SOX2-OT-241ENST00000626948 ZNF22P17026 224 aaPredicted RBP7.89□□□□□ -1.15
SOX2-OT-241ENST00000626948 IGKV2-28A0A075B6P5 120 aa7.88□□□□□ -1.15
SOX2-OT-241ENST00000626948 IGKV2D-28P01615 120 aa7.88□□□□□ -1.15
SOX2-OT-241ENST00000626948 VPREB1P12018 145 aa7.88□□□□□ -1.15
SOX2-OT-241ENST00000626948 FABP9Q0Z7S8 132 aa7.88□□□□□ -1.15
SOX2-OT-241ENST00000626948 LINC01549A6NIU2 74 aa7.87□□□□□ -1.15
SOX2-OT-241ENST00000626948 CRYGAP11844 174 aa7.87□□□□□ -1.15
SOX2-OT-241ENST00000626948 PFN2P35080 140 aa7.87□□□□□ -1.15
SOX2-OT-241ENST00000626948 PMCHL1Q16048 86 aa7.87□□□□□ -1.15
SOX2-OT-241ENST00000626948 FA2HQ7L5A8 372 aa7.87□□□□□ -1.15
SOX2-OT-241ENST00000626948 TYMSOSQ8TAI1 123 aa7.87□□□□□ -1.15
SOX2-OT-241ENST00000626948 C18orf32Q8TCD1 76 aa7.87□□□□□ -1.15
SOX2-OT-241ENST00000626948 TMEM238C9JI98 176 aa7.86□□□□□ -1.15
SOX2-OT-241ENST00000626948 S100PP25815 95 aa7.86□□□□□ -1.15
SOX2-OT-241ENST00000626948 PRLHP81277 87 aa7.86□□□□□ -1.15
SOX2-OT-241ENST00000626948 COMMD7Q86VX2 200 aa7.86□□□□□ -1.15
SOX2-OT-241ENST00000626948 SND1-IT1Q9HBX3 110 aa7.86□□□□□ -1.15
SOX2-OT-241ENST00000626948 C11orf86A6NJI1 115 aa7.85□□□□□ -1.15
SOX2-OT-241ENST00000626948 ZNF625Q96I27 306 aaPredicted RBP7.85□□□□□ -1.15
SOX2-OT-241ENST00000626948 RETNLBQ9BQ08 111 aa7.85□□□□□ -1.15
SOX2-OT-241ENST00000626948 M0R378 163 aa7.84□□□□□ -1.15
SOX2-OT-241ENST00000626948 ATP5LO75964 103 aa7.84□□□□□ -1.15
SOX2-OT-241ENST00000626948 COX19Q49B96 90 aa7.84□□□□□ -1.15
SOX2-OT-241ENST00000626948 NKAPP1Q8N9T2 125 aa7.84□□□□□ -1.15
SOX2-OT-241ENST00000626948 TMEM126AQ9H061 195 aa7.84□□□□□ -1.15
SOX2-OT-241ENST00000626948 RPS10P5Q9NQ39 176 aa7.84□□□□□ -1.15
SOX2-OT-241ENST00000626948 SMCO4Q9NRQ5 59 aa7.84□□□□□ -1.15
SOX2-OT-241ENST00000626948 ERG28Q9UKR5 140 aa7.84□□□□□ -1.15
SOX2-OT-241ENST00000626948 H3BRM9 83 aa7.83□□□□□ -1.16
SOX2-OT-241ENST00000626948 LINC00614P0C842 121 aa7.83□□□□□ -1.16
SOX2-OT-241ENST00000626948 UBE2AP49459 152 aa7.83□□□□□ -1.16
SOX2-OT-241ENST00000626948 NDUFA6P56556 154 aa7.82□□□□□ -1.16
SOX2-OT-241ENST00000626948 RHEBQ15382 184 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms