RNA–Protein interactions for RNA: ENST00000625410.1

LINC01943-201, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 2 BASIC

Gene LINC01943, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-201ENST00000625410 IGLV10-54A0A075B6I4 117 aa6.64□□□□□ -1.35
LINC01943-201ENST00000625410 IGHV3-33P01772 117 aa6.64□□□□□ -1.35
LINC01943-201ENST00000625410 NHLRC4P0CG21 123 aaPredicted RBP6.64□□□□□ -1.35
LINC01943-201ENST00000625410 KIAA0087Q14695 138 aa6.64□□□□□ -1.35
LINC01943-201ENST00000625410 HIST1H4GQ99525 98 aa6.64□□□□□ -1.35
LINC01943-201ENST00000625410 Q9H8V8 135 aa6.64□□□□□ -1.35
LINC01943-201ENST00000625410 VPS13DQ5THJ4 4388 aa6.64□□□□□ -1.35
LINC01943-201ENST00000625410 TIMM17BO60830 172 aa6.63□□□□□ -1.35
LINC01943-201ENST00000625410 SS18Q15532 418 aa6.63□□□□□ -1.35
LINC01943-201ENST00000625410 LINC01556Q5JQF7 62 aa6.63□□□□□ -1.35
LINC01943-201ENST00000625410 C15orf53Q8NAA6 179 aa6.63□□□□□ -1.35
LINC01943-201ENST00000625410 COX7B2Q8TF08 81 aa6.63□□□□□ -1.35
LINC01943-201ENST00000625410 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
LINC01943-201ENST00000625410 SPANXCQ9NY87 97 aa6.63□□□□□ -1.35
LINC01943-201ENST00000625410 COX11Q9Y6N1 276 aa6.63□□□□□ -1.35
LINC01943-201ENST00000625410 C3orf84H3BNL1 204 aa6.62□□□□□ -1.35
LINC01943-201ENST00000625410 DNAH10OSP0CZ25 163 aa6.62□□□□□ -1.35
LINC01943-201ENST00000625410 SOSTDC1Q6X4U4 206 aa6.62□□□□□ -1.35
LINC01943-201ENST00000625410 CSMD3Q7Z407 3707 aa6.62□□□□□ -1.35
LINC01943-201ENST00000625410 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
LINC01943-201ENST00000625410 RYR2Q92736 4967 aa6.62□□□□□ -1.35
LINC01943-201ENST00000625410 STARD9Q9P2P6 4700 aa6.61□□□□□ -1.35
LINC01943-201ENST00000625410 GAGE12HA6NDE8 117 aa6.61□□□□□ -1.35
LINC01943-201ENST00000625410 HERV-K104P63124 156 aa6.61□□□□□ -1.35
LINC01943-201ENST00000625410 MIAQ16674 131 aa6.61□□□□□ -1.35
LINC01943-201ENST00000625410 MUSTN1Q8IVN3 82 aa6.61□□□□□ -1.35
LINC01943-201ENST00000625410 NHP2Q9NX24 153 aaKnown RBP6.61□□□□□ -1.35
LINC01943-201ENST00000625410 APLNQ9ULZ1 77 aa6.61□□□□□ -1.35
LINC01943-201ENST00000625410 TENM2Q9NT68 2774 aa6.61□□□□□ -1.35
LINC01943-201ENST00000625410 BIRC6Q9NR09 4857 aa6.61□□□□□ -1.35
LINC01943-201ENST00000625410 A0A1B0GV72 72 aa6.6□□□□□ -1.35
LINC01943-201ENST00000625410 IGLL5B9A064 214 aa6.6□□□□□ -1.35
LINC01943-201ENST00000625410 DAND5Q8N907 189 aa6.6□□□□□ -1.35
LINC01943-201ENST00000625410 UBE2WQ96B02 151 aa6.6□□□□□ -1.35
LINC01943-201ENST00000625410 NAA38Q9BRA0 125 aaKnown RBP6.6□□□□□ -1.35
LINC01943-201ENST00000625410 UPK3BQ9BT76 320 aa6.6□□□□□ -1.35
LINC01943-201ENST00000625410 A6NDN8 102 aa6.59□□□□□ -1.35
LINC01943-201ENST00000625410 C9orf118A6NHY6 69 aa6.59□□□□□ -1.35
LINC01943-201ENST00000625410 COX7A2LO14548 114 aa6.59□□□□□ -1.35
LINC01943-201ENST00000625410 CFC1BP0CG36 223 aa6.59□□□□□ -1.35
LINC01943-201ENST00000625410 CFC1P0CG37 223 aa6.59□□□□□ -1.35
LINC01943-201ENST00000625410 SRSF9Q13242 221 aaKnown RBP eCLIP6.59□□□□□ -1.35
LINC01943-201ENST00000625410 Q8IZM0 81 aa6.59□□□□□ -1.35
LINC01943-201ENST00000625410 TOMM7Q9P0U1 55 aa6.59□□□□□ -1.35
LINC01943-201ENST00000625410 LYSTQ99698 3801 aa6.58□□□□□ -1.36
LINC01943-201ENST00000625410 SMIM13P0DJ93 91 aa6.58□□□□□ -1.36
LINC01943-201ENST00000625410 CASC10Q5T4H9 136 aa6.58□□□□□ -1.36
LINC01943-201ENST00000625410 C2orf82Q6UX34 121 aa6.58□□□□□ -1.36
LINC01943-201ENST00000625410 LINC00528Q8N1L1 170 aa6.58□□□□□ -1.36
LINC01943-201ENST00000625410 RAB37Q96AX2 223 aa6.58□□□□□ -1.36
LINC01943-201ENST00000625410 TRAV8-4A0A0B4J246 113 aa6.57□□□□□ -1.36
LINC01943-201ENST00000625410 M0QXV9 152 aa6.57□□□□□ -1.36
LINC01943-201ENST00000625410 LORP23490 312 aaPredicted RBP6.57□□□□□ -1.36
LINC01943-201ENST00000625410 C6orf223Q8N319 242 aa6.57□□□□□ -1.36
LINC01943-201ENST00000625410 LINC00308Q8TCZ7 52 aa6.57□□□□□ -1.36
LINC01943-201ENST00000625410 KRTAP1-5Q9BYS1 174 aa6.57□□□□□ -1.36
LINC01943-201ENST00000625410 KLK5Q9Y337 293 aaPredicted RBP6.57□□□□□ -1.36
LINC01943-201ENST00000625410 SACSQ9NZJ4 4579 aa6.57□□□□□ -1.36
LINC01943-201ENST00000625410 IBA57-AS1B1ANH7 110 aa6.56□□□□□ -1.36
LINC01943-201ENST00000625410 NPC2P61916 151 aa6.56□□□□□ -1.36
LINC01943-201ENST00000625410 C10orf25Q5T742 122 aa6.56□□□□□ -1.36
LINC01943-201ENST00000625410 C15orf56Q8N910 161 aa6.56□□□□□ -1.36
LINC01943-201ENST00000625410 MUC7Q8TAX7 377 aa6.56□□□□□ -1.36
LINC01943-201ENST00000625410 LINC00526Q96FQ7 95 aa6.56□□□□□ -1.36
LINC01943-201ENST00000625410 A0A0B4J2C4 111 aa6.55□□□□□ -1.36
LINC01943-201ENST00000625410 H3BUT2 72 aa6.55□□□□□ -1.36
LINC01943-201ENST00000625410 TSPAN13O95857 204 aa6.55□□□□□ -1.36
LINC01943-201ENST00000625410 CRPP02741 224 aa6.55□□□□□ -1.36
LINC01943-201ENST00000625410 IFITM1P13164 125 aa6.55□□□□□ -1.36
LINC01943-201ENST00000625410 MTURNQ8N3F0 131 aa6.55□□□□□ -1.36
LINC01943-201ENST00000625410 PPDPFQ9H3Y8 114 aa6.55□□□□□ -1.36
LINC01943-201ENST00000625410 DNAH10Q8IVF4 4471 aa6.54□□□□□ -1.36
LINC01943-201ENST00000625410 A0A1W2PPM0 123 aa6.54□□□□□ -1.36
LINC01943-201ENST00000625410 APOMO95445 188 aa6.54□□□□□ -1.36
LINC01943-201ENST00000625410 CCL18P55774 89 aa6.54□□□□□ -1.36
LINC01943-201ENST00000625410 SPAG11BQ08648 103 aa6.54□□□□□ -1.36
LINC01943-201ENST00000625410 MEIG1Q5JSS6 88 aa6.54□□□□□ -1.36
LINC01943-201ENST00000625410 MIR7-3HGQ8N6C7 128 aa6.54□□□□□ -1.36
LINC01943-201ENST00000625410 ERG28Q9UKR5 140 aa6.54□□□□□ -1.36
LINC01943-201ENST00000625410 LCE6AA0A183 80 aa6.53□□□□□ -1.36
LINC01943-201ENST00000625410 RPL24P83731 157 aaKnown RBP6.53□□□□□ -1.36
LINC01943-201ENST00000625410 LINC01620Q4KN68 170 aa6.53□□□□□ -1.36
LINC01943-201ENST00000625410 C9orf116Q5BN46 136 aaPredicted RBP6.53□□□□□ -1.36
LINC01943-201ENST00000625410 UNQ6190/PRO20217Q6UXQ8 127 aa6.53□□□□□ -1.36
LINC01943-201ENST00000625410 NTN5Q8WTR8 489 aaPredicted RBP6.53□□□□□ -1.36
LINC01943-201ENST00000625410 PRSS2P07478 247 aa6.52□□□□□ -1.37
LINC01943-201ENST00000625410 SCGB1A1P11684 91 aa6.52□□□□□ -1.37
LINC01943-201ENST00000625410 CXCL5P42830 114 aa6.52□□□□□ -1.37
LINC01943-201ENST00000625410 Q8NDZ9 215 aa6.52□□□□□ -1.37
LINC01943-201ENST00000625410 DNAH6Q9C0G6 4158 aa6.51□□□□□ -1.37
LINC01943-201ENST00000625410 IGKV2-28A0A075B6P5 120 aa6.51□□□□□ -1.37
LINC01943-201ENST00000625410 IGKV2D-28P01615 120 aa6.51□□□□□ -1.37
LINC01943-201ENST00000625410 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
LINC01943-201ENST00000625410 HIGD2BQ4VC39 106 aa6.51□□□□□ -1.37
LINC01943-201ENST00000625410 SFTA2Q6UW10 78 aa6.51□□□□□ -1.37
LINC01943-201ENST00000625410 Q9HAA7 133 aa6.51□□□□□ -1.37
LINC01943-201ENST00000625410 C6orf48Q9UBA6 75 aa6.51□□□□□ -1.37
LINC01943-201ENST00000625410 IGKV2D-24A0A075B6R9 120 aa6.5□□□□□ -1.37
LINC01943-201ENST00000625410 GVQW2A0A096LPI5 108 aaPredicted RBP6.5□□□□□ -1.37
LINC01943-201ENST00000625410 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms