RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 CHCHD1Q96BP2 118 aaKnown RBP8.24□□□□□ -1.09
SNX1-214ENST00000625244 TIMM17AQ99595 171 aa8.24□□□□□ -1.09
SNX1-214ENST00000625244 HSBP1O75506 76 aa8.23□□□□□ -1.09
SNX1-214ENST00000625244 MALP21145 153 aa8.23□□□□□ -1.09
SNX1-214ENST00000625244 C9orf116Q5BN46 136 aaPredicted RBP8.23□□□□□ -1.09
SNX1-214ENST00000625244 CD164L2Q6UWJ8 174 aa8.23□□□□□ -1.09
SNX1-214ENST00000625244 OPRPNQ99935 248 aaPredicted RBP8.23□□□□□ -1.09
SNX1-214ENST00000625244 KRTAP9-7A8MTY7 169 aa8.22□□□□□ -1.09
SNX1-214ENST00000625244 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.22□□□□□ -1.09
SNX1-214ENST00000625244 FOXI1Q12951 378 aa8.22□□□□□ -1.09
SNX1-214ENST00000625244 IGIPA6NJ69 53 aa8.21□□□□□ -1.1
SNX1-214ENST00000625244 COX7A2LO14548 114 aa8.21□□□□□ -1.1
SNX1-214ENST00000625244 SEC11AP67812 179 aa8.21□□□□□ -1.1
SNX1-214ENST00000625244 KRTAP11-1Q8IUC1 163 aa8.21□□□□□ -1.1
SNX1-214ENST00000625244 CDIP1Q9H305 208 aa8.21□□□□□ -1.1
SNX1-214ENST00000625244 ATP5LO75964 103 aa8.2□□□□□ -1.1
SNX1-214ENST00000625244 APOMO95445 188 aa8.2□□□□□ -1.1
SNX1-214ENST00000625244 SYCNQ0VAF6 134 aa8.2□□□□□ -1.1
SNX1-214ENST00000625244 IGHV1-58A0A0C4DH39 117 aa8.19□□□□□ -1.1
SNX1-214ENST00000625244 LOC107984640A0A0U1RRK4 108 aa8.19□□□□□ -1.1
SNX1-214ENST00000625244 PMCHL1Q16048 86 aa8.19□□□□□ -1.1
SNX1-214ENST00000625244 URB1-AS1Q96HZ7 61 aa8.19□□□□□ -1.1
SNX1-214ENST00000625244 AMELXQ99217 191 aa8.19□□□□□ -1.1
SNX1-214ENST00000625244 A0A087WZ39 114 aa8.18□□□□□ -1.1
SNX1-214ENST00000625244 NDUFA6P56556 154 aa8.18□□□□□ -1.1
SNX1-214ENST00000625244 FAM104AQ969W3 186 aa8.18□□□□□ -1.1
SNX1-214ENST00000625244 GEMIN7Q9H840 131 aaKnown RBP8.18□□□□□ -1.1
SNX1-214ENST00000625244 ZNF561-AS1K7EIQ3 104 aa8.17□□□□□ -1.1
SNX1-214ENST00000625244 SERF1AO75920 110 aa8.17□□□□□ -1.1
SNX1-214ENST00000625244 PMVKQ15126 192 aa8.17□□□□□ -1.1
SNX1-214ENST00000625244 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
SNX1-214ENST00000625244 RETNLBQ9BQ08 111 aa8.17□□□□□ -1.1
SNX1-214ENST00000625244 HERVK_113P63121 156 aa8.16□□□□□ -1.1
SNX1-214ENST00000625244 LINC00242Q5T6M2 205 aa8.16□□□□□ -1.1
SNX1-214ENST00000625244 ZC2HC1BQ5TFG8 222 aa8.16□□□□□ -1.1
SNX1-214ENST00000625244 LINC00173Q6ZV60 143 aa8.16□□□□□ -1.1
SNX1-214ENST00000625244 A0A096LNJ9 63 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 HIST1H2BKO60814 126 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 HIST1H2BJP06899 126 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 HIST1H2BOP23527 126 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 HIST1H2BBP33778 126 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 HIST1H2BDP58876 126 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 HIST1H2BCP62807 126 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 HIST2H2BEQ16778 126 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 TPRXLQ17RH7 258 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 PDZD11Q5EBL8 140 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.15□□□□□ -1.1
SNX1-214ENST00000625244 HIST1H2BHQ93079 126 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 PACRGQ96M98 296 aaPredicted RBP8.15□□□□□ -1.1
SNX1-214ENST00000625244 HIST1H2BNQ99877 126 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 HIST1H2BMQ99879 126 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 CST9LQ9H4G1 147 aa8.15□□□□□ -1.1
SNX1-214ENST00000625244 IGHV3OR16-9A0A0B4J2B5 98 aa8.14□□□□□ -1.11
SNX1-214ENST00000625244 FAM19A2Q8N3H0 131 aa8.14□□□□□ -1.11
SNX1-214ENST00000625244 LEPROTL1O95214 131 aa8.13□□□□□ -1.11
SNX1-214ENST00000625244 FAM19A3Q7Z5A8 133 aa8.13□□□□□ -1.11
SNX1-214ENST00000625244 LINC00469Q8N7U9 141 aa8.13□□□□□ -1.11
SNX1-214ENST00000625244 OR10D4PQ8NGN7 298 aa8.13□□□□□ -1.11
SNX1-214ENST00000625244 ORAOV1Q8WV07 137 aa8.13□□□□□ -1.11
SNX1-214ENST00000625244 IFI27L1Q96BM0 104 aa8.13□□□□□ -1.11
SNX1-214ENST00000625244 HSPB8Q9UJY1 196 aa8.13□□□□□ -1.11
SNX1-214ENST00000625244 TINCRA0A1B0GVN0 87 aa8.12□□□□□ -1.11
SNX1-214ENST00000625244 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.12□□□□□ -1.11
SNX1-214ENST00000625244 SPAG11BQ08648 103 aa8.12□□□□□ -1.11
SNX1-214ENST00000625244 LINC01561Q8N1V8 128 aa8.12□□□□□ -1.11
SNX1-214ENST00000625244 IGLV4-69A0A075B6H9 119 aa8.11□□□□□ -1.11
SNX1-214ENST00000625244 H3BRM9 83 aa8.11□□□□□ -1.11
SNX1-214ENST00000625244 PRSS2P07478 247 aa8.11□□□□□ -1.11
SNX1-214ENST00000625244 CRYGAP11844 174 aa8.11□□□□□ -1.11
SNX1-214ENST00000625244 RPL18AQ02543 176 aaKnown RBP8.11□□□□□ -1.11
SNX1-214ENST00000625244 FAM168BA1KXE4 195 aa8.1□□□□□ -1.11
SNX1-214ENST00000625244 CAMK2N2Q96S95 79 aa8.1□□□□□ -1.11
SNX1-214ENST00000625244 KRTAP4-1Q9BYQ7 146 aa8.1□□□□□ -1.11
SNX1-214ENST00000625244 CHTOPQ9Y3Y2 248 aaKnown RBP8.1□□□□□ -1.11
SNX1-214ENST00000625244 TRAV12-1A0A0B4J245 112 aa8.09□□□□□ -1.11
SNX1-214ENST00000625244 F8WDY8 70 aa8.09□□□□□ -1.11
SNX1-214ENST00000625244 H0Y8G0 127 aa8.09□□□□□ -1.11
SNX1-214ENST00000625244 FABP4P15090 132 aa8.09□□□□□ -1.11
SNX1-214ENST00000625244 LINC00310P59036 64 aa8.09□□□□□ -1.11
SNX1-214ENST00000625244 C2orf48Q96LS8 159 aa8.09□□□□□ -1.11
SNX1-214ENST00000625244 CDKN2A-AS1Q9UH64 79 aa8.09□□□□□ -1.11
SNX1-214ENST00000625244 IGLV7-46A0A075B6I9 117 aa8.08□□□□□ -1.12
SNX1-214ENST00000625244 A0A087X002 238 aa8.08□□□□□ -1.12
SNX1-214ENST00000625244 IGLC3P0DOY3 106 aa8.08□□□□□ -1.12
SNX1-214ENST00000625244 MAP1LC3CQ9BXW4 147 aa8.08□□□□□ -1.12
SNX1-214ENST00000625244 TOMM7Q9P0U1 55 aa8.08□□□□□ -1.12
SNX1-214ENST00000625244 NDUFA1O15239 70 aa8.07□□□□□ -1.12
SNX1-214ENST00000625244 NUPR1O60356 82 aa8.07□□□□□ -1.12
SNX1-214ENST00000625244 SMCPP49901 116 aaPredicted RBP8.07□□□□□ -1.12
SNX1-214ENST00000625244 CKS1BP61024 79 aa8.07□□□□□ -1.12
SNX1-214ENST00000625244 C6orf226Q5I0X4 101 aa8.07□□□□□ -1.12
SNX1-214ENST00000625244 IGLV5-45A0A087WSX0 123 aa8.06□□□□□ -1.12
SNX1-214ENST00000625244 F8VRH5 84 aa8.06□□□□□ -1.12
SNX1-214ENST00000625244 S100A6P06703 90 aa8.06□□□□□ -1.12
SNX1-214ENST00000625244 COA6Q5JTJ3 125 aaKnown RBP8.06□□□□□ -1.12
SNX1-214ENST00000625244 TMEM170BQ5T4T1 132 aa8.06□□□□□ -1.12
SNX1-214ENST00000625244 CXCL5P42830 114 aa8.05□□□□□ -1.12
SNX1-214ENST00000625244 Q8IZM0 81 aa8.05□□□□□ -1.12
SNX1-214ENST00000625244 TYMSOSQ8TAI1 123 aa8.05□□□□□ -1.12
SNX1-214ENST00000625244 C11orf86A6NJI1 115 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms