RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 SYCNQ0VAF6 134 aa6.16□□□□□ -1.42
LINC01560-202ENST00000624822 DPH3Q96FX2 82 aa6.16□□□□□ -1.42
LINC01560-202ENST00000624822 PDZD11Q5EBL8 140 aa6.15□□□□□ -1.42
LINC01560-202ENST00000624822 Q6ZSA8 131 aa6.15□□□□□ -1.42
LINC01560-202ENST00000624822 FAM19A3Q7Z5A8 133 aa6.15□□□□□ -1.42
LINC01560-202ENST00000624822 FAM19A2Q8N3H0 131 aa6.15□□□□□ -1.42
LINC01560-202ENST00000624822 LINC00469Q8N7U9 141 aa6.15□□□□□ -1.42
LINC01560-202ENST00000624822 CST9LQ9H4G1 147 aa6.15□□□□□ -1.42
LINC01560-202ENST00000624822 TOMM7Q9P0U1 55 aa6.15□□□□□ -1.42
LINC01560-202ENST00000624822 IGKV2-24A0A0C4DH68 120 aa6.14□□□□□ -1.43
LINC01560-202ENST00000624822 TINCRA0A1B0GVN0 87 aa6.14□□□□□ -1.43
LINC01560-202ENST00000624822 NDUFA1O15239 70 aa6.14□□□□□ -1.43
LINC01560-202ENST00000624822 SERF1AO75920 110 aa6.14□□□□□ -1.43
LINC01560-202ENST00000624822 PRSS2P07478 247 aa6.14□□□□□ -1.43
LINC01560-202ENST00000624822 SDIM1Q6ZPB5 146 aa6.14□□□□□ -1.43
LINC01560-202ENST00000624822 Q6ZRU5 148 aa6.14□□□□□ -1.43
LINC01560-202ENST00000624822 SCXQ7RTU7 201 aa6.14□□□□□ -1.43
LINC01560-202ENST00000624822 C2orf48Q96LS8 159 aa6.14□□□□□ -1.43
LINC01560-202ENST00000624822 CDKN2A-AS1Q9UH64 79 aa6.14□□□□□ -1.43
LINC01560-202ENST00000624822 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
LINC01560-202ENST00000624822 APOBP04114 4563 aaKnown RBP6.14□□□□□ -1.43
LINC01560-202ENST00000624822 CHTF8P0CG12 524 aa6.13□□□□□ -1.43
LINC01560-202ENST00000624822 LINC01561Q8N1V8 128 aa6.13□□□□□ -1.43
LINC01560-202ENST00000624822 Q8N1X5 172 aa6.13□□□□□ -1.43
LINC01560-202ENST00000624822 CHAC1Q9BUX1 264 aa6.13□□□□□ -1.43
LINC01560-202ENST00000624822 RYR1P21817 5038 aa6.13□□□□□ -1.43
LINC01560-202ENST00000624822 H0Y8G0 127 aa6.12□□□□□ -1.43
LINC01560-202ENST00000624822 LEPROTL1O95214 131 aa6.12□□□□□ -1.43
LINC01560-202ENST00000624822 S100A2P29034 98 aa6.12□□□□□ -1.43
LINC01560-202ENST00000624822 RPL18AQ02543 176 aaKnown RBP6.12□□□□□ -1.43
LINC01560-202ENST00000624822 MAJINQ3KP22 176 aa6.12□□□□□ -1.43
LINC01560-202ENST00000624822 C6orf226Q5I0X4 101 aa6.12□□□□□ -1.43
LINC01560-202ENST00000624822 HIST3H2BBQ8N257 126 aa6.12□□□□□ -1.43
LINC01560-202ENST00000624822 CIRBP-AS1Q8TBR5 109 aa6.12□□□□□ -1.43
LINC01560-202ENST00000624822 IFI27L1Q96BM0 104 aa6.12□□□□□ -1.43
LINC01560-202ENST00000624822 A0A096LNI7 61 aa6.11□□□□□ -1.43
LINC01560-202ENST00000624822 LOC107984640A0A0U1RRK4 108 aa6.11□□□□□ -1.43
LINC01560-202ENST00000624822 EPM2AB3EWF7 344 aa6.11□□□□□ -1.43
LINC01560-202ENST00000624822 F8WDY8 70 aa6.11□□□□□ -1.43
LINC01560-202ENST00000624822 H3BRM9 83 aa6.11□□□□□ -1.43
LINC01560-202ENST00000624822 PANO1I0J062 215 aa6.11□□□□□ -1.43
LINC01560-202ENST00000624822 SPINK8P0C7L1 97 aa6.11□□□□□ -1.43
LINC01560-202ENST00000624822 CKS1BP61024 79 aa6.11□□□□□ -1.43
LINC01560-202ENST00000624822 GAGE2BQ13066 116 aa6.11□□□□□ -1.43
LINC01560-202ENST00000624822 Q5VSD8 79 aa6.11□□□□□ -1.43
LINC01560-202ENST00000624822 CHTOPQ9Y3Y2 248 aaKnown RBP6.11□□□□□ -1.43
LINC01560-202ENST00000624822 HERC2O95714 4834 aa6.11□□□□□ -1.43
LINC01560-202ENST00000624822 DNAH8Q96JB1 4490 aa6.1□□□□□ -1.43
LINC01560-202ENST00000624822 SMIM1B2RUZ4 78 aa6.1□□□□□ -1.43
LINC01560-202ENST00000624822 NUPR1O60356 82 aa6.1□□□□□ -1.43
LINC01560-202ENST00000624822 IGLC3P0DOY3 106 aa6.1□□□□□ -1.43
LINC01560-202ENST00000624822 FABP4P15090 132 aa6.1□□□□□ -1.43
LINC01560-202ENST00000624822 KIAA0087Q14695 138 aa6.1□□□□□ -1.43
LINC01560-202ENST00000624822 TMEM170BQ5T4T1 132 aa6.1□□□□□ -1.43
LINC01560-202ENST00000624822 C2orf82Q6UX34 121 aa6.1□□□□□ -1.43
LINC01560-202ENST00000624822 UNQ6190/PRO20217Q6UXQ8 127 aa6.1□□□□□ -1.43
LINC01560-202ENST00000624822 Q8IZM0 81 aa6.1□□□□□ -1.43
LINC01560-202ENST00000624822 SPACA4Q8TDM5 124 aa6.1□□□□□ -1.43
LINC01560-202ENST00000624822 MRPL35Q9NZE8 188 aaKnown RBP6.1□□□□□ -1.43
LINC01560-202ENST00000624822 HSPG2P98160 4391 aa6.09□□□□□ -1.43
LINC01560-202ENST00000624822 IGLV5-45A0A087WSX0 123 aa6.09□□□□□ -1.43
LINC01560-202ENST00000624822 A0A087WYN8 130 aa6.09□□□□□ -1.43
LINC01560-202ENST00000624822 ZNF22P17026 224 aaPredicted RBP6.09□□□□□ -1.43
LINC01560-202ENST00000624822 RNF151Q2KHN1 245 aa6.09□□□□□ -1.43
LINC01560-202ENST00000624822 COA6Q5JTJ3 125 aaKnown RBP6.09□□□□□ -1.43
LINC01560-202ENST00000624822 C10orf25Q5T742 122 aa6.09□□□□□ -1.43
LINC01560-202ENST00000624822 COX7B2Q8TF08 81 aa6.09□□□□□ -1.43
LINC01560-202ENST00000624822 LINC00474Q9P2X8 69 aa6.09□□□□□ -1.43
LINC01560-202ENST00000624822 C6orf48Q9UBA6 75 aa6.09□□□□□ -1.43
LINC01560-202ENST00000624822 HSPB8Q9UJY1 196 aa6.09□□□□□ -1.43
LINC01560-202ENST00000624822 TRAV12-1A0A0B4J245 112 aa6.08□□□□□ -1.44
LINC01560-202ENST00000624822 TRBV30A0A0K0K1B3 111 aa6.08□□□□□ -1.44
LINC01560-202ENST00000624822 C11orf86A6NJI1 115 aa6.08□□□□□ -1.44
LINC01560-202ENST00000624822 CXCL5P42830 114 aa6.08□□□□□ -1.44
LINC01560-202ENST00000624822 PTTG1IPP53801 180 aa6.08□□□□□ -1.44
LINC01560-202ENST00000624822 CIRBPQ14011 172 aaKnown RBP6.08□□□□□ -1.44
LINC01560-202ENST00000624822 C21orf62-AS1Q17RA5 79 aa6.08□□□□□ -1.44
LINC01560-202ENST00000624822 LINC00518Q8N0U6 118 aa6.08□□□□□ -1.44
LINC01560-202ENST00000624822 STPG4Q8N801 248 aa6.08□□□□□ -1.44
LINC01560-202ENST00000624822 F8VRH5 84 aa6.07□□□□□ -1.44
LINC01560-202ENST00000624822 GAGE2EQ4V326 116 aa6.07□□□□□ -1.44
LINC01560-202ENST00000624822 C9orf116Q5BN46 136 aaPredicted RBP6.07□□□□□ -1.44
LINC01560-202ENST00000624822 HIST1H2BLQ99880 126 aa6.07□□□□□ -1.44
LINC01560-202ENST00000624822 GAGE2DQ9UEU5 116 aa6.07□□□□□ -1.44
LINC01560-202ENST00000624822 PLA2G2DQ9UNK4 145 aa6.07□□□□□ -1.44
LINC01560-202ENST00000624822 PLA2G1BP04054 148 aaKnown RBP6.06□□□□□ -1.44
LINC01560-202ENST00000624822 SMIM6P0DI80 62 aa6.06□□□□□ -1.44
LINC01560-202ENST00000624822 KRTAP5-3Q6L8H2 238 aa6.06□□□□□ -1.44
LINC01560-202ENST00000624822 C12orf57Q99622 126 aa6.06□□□□□ -1.44
LINC01560-202ENST00000624822 MAP1LC3CQ9BXW4 147 aa6.06□□□□□ -1.44
LINC01560-202ENST00000624822 TLX1NBP0CAT3 122 aa6.05□□□□□ -1.44
LINC01560-202ENST00000624822 ODF1Q14990 250 aa6.05□□□□□ -1.44
LINC01560-202ENST00000624822 Q6ZRP5 223 aa6.05□□□□□ -1.44
LINC01560-202ENST00000624822 PLAC8Q9NZF1 115 aa6.05□□□□□ -1.44
LINC01560-202ENST00000624822 NDUFC2-KCTD14E9PQ53 114 aa6.04□□□□□ -1.44
LINC01560-202ENST00000624822 RPL37AP61513 92 aaKnown RBP6.04□□□□□ -1.44
LINC01560-202ENST00000624822 C7orf33Q8WU49 177 aa6.04□□□□□ -1.44
LINC01560-202ENST00000624822 IGLV5-39A0A0G2JS06 123 aa6.03□□□□□ -1.44
LINC01560-202ENST00000624822 PMCHL2Q9BQD1 86 aa6.03□□□□□ -1.44
LINC01560-202ENST00000624822 A0A1W2PNN7 141 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms