RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 CDKN2A-AS1Q9UH64 79 aa7.74□□□□□ -1.17
LINC00963-217ENST00000624009 LINC00614P0C842 121 aa7.73□□□□□ -1.17
LINC00963-217ENST00000624009 RAB5BP61020 215 aa7.73□□□□□ -1.17
LINC00963-217ENST00000624009 CKS1BP61024 79 aa7.73□□□□□ -1.17
LINC00963-217ENST00000624009 PMVKQ15126 192 aa7.73□□□□□ -1.17
LINC00963-217ENST00000624009 PDZD11Q5EBL8 140 aa7.73□□□□□ -1.17
LINC00963-217ENST00000624009 C6orf226Q5I0X4 101 aa7.73□□□□□ -1.17
LINC00963-217ENST00000624009 SPINK6Q6UWN8 80 aa7.73□□□□□ -1.17
LINC00963-217ENST00000624009 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
LINC00963-217ENST00000624009 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
LINC00963-217ENST00000624009 CST9LQ9H4G1 147 aa7.73□□□□□ -1.17
LINC00963-217ENST00000624009 SERTAD4-AS1Q5TG53 156 aa7.72□□□□□ -1.17
LINC00963-217ENST00000624009 C2orf82Q6UX34 121 aa7.72□□□□□ -1.17
LINC00963-217ENST00000624009 YPEL4Q96NS1 127 aa7.72□□□□□ -1.17
LINC00963-217ENST00000624009 SMIM1B2RUZ4 78 aa7.71□□□□□ -1.18
LINC00963-217ENST00000624009 F8VRH5 84 aa7.71□□□□□ -1.18
LINC00963-217ENST00000624009 HBDP02042 147 aa7.71□□□□□ -1.18
LINC00963-217ENST00000624009 LINC00469Q8N7U9 141 aa7.71□□□□□ -1.18
LINC00963-217ENST00000624009 A0A096LNJ9 63 aa7.7□□□□□ -1.18
LINC00963-217ENST00000624009 SRSF9Q13242 221 aaKnown RBP eCLIP7.7□□□□□ -1.18
LINC00963-217ENST00000624009 URB1-AS1Q96HZ7 61 aa7.7□□□□□ -1.18
LINC00963-217ENST00000624009 TNXBP22105 4242 aa7.7□□□□□ -1.18
LINC00963-217ENST00000624009 H3BRM9 83 aa7.69□□□□□ -1.18
LINC00963-217ENST00000624009 ATP5LO75964 103 aa7.69□□□□□ -1.18
LINC00963-217ENST00000624009 IGLC3P0DOY3 106 aa7.69□□□□□ -1.18
LINC00963-217ENST00000624009 GAGE2EQ4V326 116 aa7.69□□□□□ -1.18
LINC00963-217ENST00000624009 TOMM7Q9P0U1 55 aa7.69□□□□□ -1.18
LINC00963-217ENST00000624009 GAGE2DQ9UEU5 116 aa7.69□□□□□ -1.18
LINC00963-217ENST00000624009 MT1HL1P0DM35 61 aa7.68□□□□□ -1.18
LINC00963-217ENST00000624009 REG3GQ6UW15 175 aa7.68□□□□□ -1.18
LINC00963-217ENST00000624009 CHCHD1Q96BP2 118 aaKnown RBP7.68□□□□□ -1.18
LINC00963-217ENST00000624009 LINC01600Q96MT4 127 aa7.68□□□□□ -1.18
LINC00963-217ENST00000624009 PSORS1C2Q9UIG4 136 aa7.68□□□□□ -1.18
LINC00963-217ENST00000624009 HMCN2Q8NDA2 5059 aa7.68□□□□□ -1.18
LINC00963-217ENST00000624009 C9orf129Q5T035 196 aaKnown RBP7.67□□□□□ -1.18
LINC00963-217ENST00000624009 PHF5AQ7RTV0 110 aaKnown RBP7.67□□□□□ -1.18
LINC00963-217ENST00000624009 COX7B2Q8TF08 81 aa7.67□□□□□ -1.18
LINC00963-217ENST00000624009 IGLV5-39A0A0G2JS06 123 aa7.66□□□□□ -1.18
LINC00963-217ENST00000624009 FAM168BA1KXE4 195 aa7.65□□□□□ -1.18
LINC00963-217ENST00000624009 M0QXV9 152 aa7.65□□□□□ -1.18
LINC00963-217ENST00000624009 SFTA2Q6UW10 78 aa7.65□□□□□ -1.18
LINC00963-217ENST00000624009 KRTAP7-1Q8IUC3 87 aa7.65□□□□□ -1.18
LINC00963-217ENST00000624009 TP73-AS1Q9UF72 201 aa7.65□□□□□ -1.18
LINC00963-217ENST00000624009 C1orf137Q5JT78 98 aa7.64□□□□□ -1.19
LINC00963-217ENST00000624009 FAM19A5Q7Z5A7 132 aaPredicted RBP7.64□□□□□ -1.19
LINC00963-217ENST00000624009 TRAV12-1A0A0B4J245 112 aa7.63□□□□□ -1.19
LINC00963-217ENST00000624009 SPINK8P0C7L1 97 aa7.63□□□□□ -1.19
LINC00963-217ENST00000624009 ZNF22P17026 224 aaPredicted RBP7.63□□□□□ -1.19
LINC00963-217ENST00000624009 PLA2G2DQ9UNK4 145 aa7.63□□□□□ -1.19
LINC00963-217ENST00000624009 IGLV7-43P04211 117 aa7.62□□□□□ -1.19
LINC00963-217ENST00000624009 LBHQ53QV2 105 aaPredicted RBP7.62□□□□□ -1.19
LINC00963-217ENST00000624009 CBLN2Q8IUK8 224 aa7.62□□□□□ -1.19
LINC00963-217ENST00000624009 NDUFA6P56556 154 aa7.61□□□□□ -1.19
LINC00963-217ENST00000624009 COX17Q14061 63 aa7.61□□□□□ -1.19
LINC00963-217ENST00000624009 PMCHL1Q16048 86 aa7.61□□□□□ -1.19
LINC00963-217ENST00000624009 BAGE3Q86Y29 109 aa7.61□□□□□ -1.19
LINC00963-217ENST00000624009 DIRC1Q969H9 104 aa7.61□□□□□ -1.19
LINC00963-217ENST00000624009 NUPR1O60356 82 aa7.6□□□□□ -1.19
LINC00963-217ENST00000624009 UBE2BP63146 152 aa7.6□□□□□ -1.19
LINC00963-217ENST00000624009 XAGE1AQ9HD64 81 aa7.6□□□□□ -1.19
LINC00963-217ENST00000624009 IGLV5-37A0A075B6J1 123 aa7.59□□□□□ -1.19
LINC00963-217ENST00000624009 C11orf86A6NJI1 115 aa7.59□□□□□ -1.19
LINC00963-217ENST00000624009 KRTAP10-8P60410 259 aa7.59□□□□□ -1.19
LINC00963-217ENST00000624009 KRTAP11-1Q8IUC1 163 aa7.59□□□□□ -1.19
LINC00963-217ENST00000624009 IFI27L1Q96BM0 104 aa7.59□□□□□ -1.19
LINC00963-217ENST00000624009 C22orf24Q9Y442 160 aa7.59□□□□□ -1.19
LINC00963-217ENST00000624009 HSBP1O75506 76 aa7.58□□□□□ -1.2
LINC00963-217ENST00000624009 TRGC2P03986 189 aa7.58□□□□□ -1.2
LINC00963-217ENST00000624009 MRPL55Q7Z7F7 128 aaKnown RBP7.58□□□□□ -1.2
LINC00963-217ENST00000624009 CHTOPQ9Y3Y2 248 aaKnown RBP7.58□□□□□ -1.2
LINC00963-217ENST00000624009 H0Y9J4 135 aa7.57□□□□□ -1.2
LINC00963-217ENST00000624009 TMEM170BQ5T4T1 132 aa7.57□□□□□ -1.2
LINC00963-217ENST00000624009 SLC7A5P1Q8MH63 180 aa7.57□□□□□ -1.2
LINC00963-217ENST00000624009 ZNF625Q96I27 306 aaPredicted RBP7.56□□□□□ -1.2
LINC00963-217ENST00000624009 TMEM223A0PJW6 202 aa7.55□□□□□ -1.2
LINC00963-217ENST00000624009 COLCA2A8K830 154 aa7.55□□□□□ -1.2
LINC00963-217ENST00000624009 ERG28Q9UKR5 140 aa7.55□□□□□ -1.2
LINC00963-217ENST00000624009 ZNF861PO60384 105 aa7.54□□□□□ -1.2
LINC00963-217ENST00000624009 IGLV1-50A0A075B6I6 118 aa7.53□□□□□ -1.2
LINC00963-217ENST00000624009 SERF1AO75920 110 aa7.53□□□□□ -1.2
LINC00963-217ENST00000624009 LEPROTL1O95214 131 aa7.53□□□□□ -1.2
LINC00963-217ENST00000624009 FAM19A2Q8N3H0 131 aa7.53□□□□□ -1.2
LINC00963-217ENST00000624009 NKAPP1Q8N9T2 125 aa7.53□□□□□ -1.2
LINC00963-217ENST00000624009 PFN2P35080 140 aa7.52□□□□□ -1.21
LINC00963-217ENST00000624009 LINC00310P59036 64 aa7.52□□□□□ -1.21
LINC00963-217ENST00000624009 RPL24P83731 157 aaKnown RBP7.52□□□□□ -1.21
LINC00963-217ENST00000624009 LINC00167Q96N53 147 aa7.52□□□□□ -1.21
LINC00963-217ENST00000624009 SND1-IT1Q9HBX3 110 aa7.52□□□□□ -1.21
LINC00963-217ENST00000624009 HSPB8Q9UJY1 196 aa7.52□□□□□ -1.21
LINC00963-217ENST00000624009 LINC00587B1AMM8 73 aa7.51□□□□□ -1.21
LINC00963-217ENST00000624009 BCE1O60756 84 aa7.51□□□□□ -1.21
LINC00963-217ENST00000624009 PLNP26678 52 aa7.51□□□□□ -1.21
LINC00963-217ENST00000624009 RPL28P46779 137 aaKnown RBP7.51□□□□□ -1.21
LINC00963-217ENST00000624009 HERV-K104P63124 156 aa7.51□□□□□ -1.21
LINC00963-217ENST00000624009 LRP2P98164 4655 aa7.5□□□□□ -1.21
LINC00963-217ENST00000624009 KRTAP1-4P0C5Y4 121 aa7.5□□□□□ -1.21
LINC00963-217ENST00000624009 RPL13AP40429 203 aaKnown RBP7.5□□□□□ -1.21
LINC00963-217ENST00000624009 VPREB1P12018 145 aa7.49□□□□□ -1.21
LINC00963-217ENST00000624009 UBR4Q5T4S7 5183 aa7.48□□□□□ -1.21
LINC00963-217ENST00000624009 KRTAP13-1Q8IUC0 172 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms