RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y IGIPA6NJ69 53 aa9.67□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y TSPAN13O95857 204 aa9.67□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y G0S2P27469 103 aa9.67□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y ANKRD39Q53RE8 183 aa9.67□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y ZC2HC1BQ5TFG8 222 aa9.67□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y LINC00173Q6ZV60 143 aa9.67□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y PACRGQ96M98 296 aaPredicted RBP9.67□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y PAPPA-AS1Q5QFB9 102 aa9.66□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y NDUFC2-KCTD14E9PQ53 114 aa9.65□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y PRSS2P07478 247 aa9.65□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y C9orf129Q5T035 196 aaKnown RBP9.65□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y UQCC3Q6UW78 93 aa9.65□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y FAM19A3Q7Z5A8 133 aa9.65□□□□□ -0.86
CD99-211ENST00000623253_PAR_Y SEC11AP67812 179 aa9.64□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y KRTAP9-2Q9BYQ4 174 aa9.64□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y CARHSP1Q9Y2V2 147 aaKnown RBP9.64□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y TRAV9-1A0A075B6T8 112 aa9.63□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y ZNF861PO60384 105 aa9.63□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y ADCYAP1P18509 176 aa9.63□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y CKS1BP61024 79 aa9.63□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y TIMM17AQ99595 171 aa9.63□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y TOMM7Q9P0U1 55 aa9.63□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y TMEM218A2RU14 115 aa9.62□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y HERVK_113P63121 156 aa9.62□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y KIAA1644Q3SXP7 199 aa9.62□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y Q8IZM0 81 aa9.62□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y TOMM6Q96B49 74 aa9.62□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y C6orf226Q5I0X4 101 aa9.61□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y LINC00469Q8N7U9 141 aa9.61□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y ALKBH7Q9BT30 221 aaPredicted RBP9.61□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y GEMIN7Q9H840 131 aaKnown RBP9.61□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y CDKN2A-AS1Q9UH64 79 aa9.6□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y S100PP25815 95 aa9.59□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y LCE2CQ5TA81 110 aa9.59□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y ERASQ7Z444 233 aa9.59□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y SCGB3A1Q96QR1 104 aa9.59□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y C22orf24Q9Y442 160 aa9.59□□□□□ -0.87
CD99-211ENST00000623253_PAR_Y LBHQ53QV2 105 aaPredicted RBP9.58□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y SEC11CQ9BY50 192 aa9.58□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y GNB1LQ9BYB4 327 aa9.58□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y XAGE1AQ9HD64 81 aa9.58□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y LINC01549A6NIU2 74 aa9.57□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y NUPR1O60356 82 aa9.57□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y F8VRH5 84 aa9.56□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y CXCL5P42830 114 aa9.56□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y IFITM2Q01629 132 aa9.56□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y COX19Q49B96 90 aa9.56□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y TYMSOSQ8TAI1 123 aa9.56□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y A0A087X002 238 aa9.55□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y LINC01546A6NGU7 62 aa9.55□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y TINCRA0A1B0GVN0 87 aa9.54□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y CRYGAP11844 174 aa9.54□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y RPL28P46779 137 aaKnown RBP9.54□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y PDZD11Q5EBL8 140 aa9.54□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y SMIM1B2RUZ4 78 aa9.53□□□□□ -0.88
CD99-211ENST00000623253_PAR_Y IGLV5-45A0A087WSX0 123 aa9.52□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y BCE1O60756 84 aa9.52□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y FA2HQ7L5A8 372 aa9.52□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y MRPL55Q7Z7F7 128 aaKnown RBP9.52□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y COMMD7Q86VX2 200 aa9.52□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y COX7B2Q8TF08 81 aa9.52□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y CST9LQ9H4G1 147 aa9.52□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y SMCO4Q9NRQ5 59 aa9.52□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y FABP9Q0Z7S8 132 aa9.51□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y ANAPC11Q9NYG5 84 aa9.51□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y TP73-AS1Q9UF72 201 aa9.51□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y RPL37AP8A6NKH3 93 aa9.5□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y PMVKQ15126 192 aa9.5□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y RHEBQ15382 184 aa9.5□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y RETNLBQ9BQ08 111 aa9.5□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y C10orf91Q5T1B1 145 aa9.49□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y LCE2AQ5TA79 106 aaPredicted RBP9.49□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y FAT4Q6V0I7 4981 aa9.48□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y RPS10P5Q9NQ39 176 aa9.48□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y GAGE10A6NGK3 116 aa9.47□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y H3BRM9 83 aa9.47□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y SPINK8P0C7L1 97 aa9.47□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y LINC00167Q96N53 147 aa9.47□□□□□ -0.89
CD99-211ENST00000623253_PAR_Y CDIP1Q9H305 208 aa9.46□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y UBE2AP49459 152 aa9.45□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y KRTAP9-6A0A140TA67 174 aa9.44□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y IGLC3P0DOY3 106 aa9.44□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y KRTAP13-2Q52LG2 175 aa9.44□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y TRAPPC1Q9Y5R8 145 aa9.44□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y ATP5LO75964 103 aa9.43□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y RAB5BP61020 215 aa9.43□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y LINC00304Q8N9R0 145 aa9.43□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y A0A096LNJ9 63 aa9.42□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y LINC00614P0C842 121 aa9.42□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y NDUFA6P56556 154 aa9.42□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y IGLV5-37A0A075B6J1 123 aa9.41□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y HBDP02042 147 aa9.41□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y NKAPP1Q8N9T2 125 aa9.41□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y C18orf32Q8TCD1 76 aa9.41□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y IGLV7-46A0A075B6I9 117 aa9.4□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y IGKV2D-26A0A0A0MRZ7 120 aa9.4□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y IGLV5-39A0A0G2JS06 123 aa9.4□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y URB1-AS1Q96HZ7 61 aa9.4□□□□□ -0.9
CD99-211ENST00000623253_PAR_Y ZNF22P17026 224 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms