RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 LINC01561Q8N1V8 128 aa8.15□□□□□ -1.1
ATRX-208ENST00000622960 FAM104AQ969W3 186 aa8.15□□□□□ -1.1
ATRX-208ENST00000622960 CKS1BP61024 79 aa8.14□□□□□ -1.11
ATRX-208ENST00000622960 HERVK_113P63121 156 aa8.14□□□□□ -1.11
ATRX-208ENST00000622960 UNQ6190/PRO20217Q6UXQ8 127 aa8.14□□□□□ -1.11
ATRX-208ENST00000622960 GEMIN7Q9H840 131 aaKnown RBP8.14□□□□□ -1.11
ATRX-208ENST00000622960 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
ATRX-208ENST00000622960 A0A1W2PNN7 141 aa8.13□□□□□ -1.11
ATRX-208ENST00000622960 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
ATRX-208ENST00000622960 GAGE2EQ4V326 116 aa8.13□□□□□ -1.11
ATRX-208ENST00000622960 TIMM17AQ99595 171 aa8.13□□□□□ -1.11
ATRX-208ENST00000622960 GAGE2DQ9UEU5 116 aa8.13□□□□□ -1.11
ATRX-208ENST00000622960 KIAA1644Q3SXP7 199 aa8.12□□□□□ -1.11
ATRX-208ENST00000622960 C6orf226Q5I0X4 101 aa8.12□□□□□ -1.11
ATRX-208ENST00000622960 BAGE3Q86Y29 109 aa8.12□□□□□ -1.11
ATRX-208ENST00000622960 AMELXQ99217 191 aa8.12□□□□□ -1.11
ATRX-208ENST00000622960 C6orf48Q9UBA6 75 aa8.12□□□□□ -1.11
ATRX-208ENST00000622960 IGIPA6NJ69 53 aa8.11□□□□□ -1.11
ATRX-208ENST00000622960 C1orf137Q5JT78 98 aa8.11□□□□□ -1.11
ATRX-208ENST00000622960 C10orf25Q5T742 122 aa8.11□□□□□ -1.11
ATRX-208ENST00000622960 FAM19A5Q7Z5A7 132 aaPredicted RBP8.11□□□□□ -1.11
ATRX-208ENST00000622960 HIST3H2BBQ8N257 126 aa8.11□□□□□ -1.11
ATRX-208ENST00000622960 TOMM6Q96B49 74 aa8.11□□□□□ -1.11
ATRX-208ENST00000622960 LINC01600Q96MT4 127 aa8.11□□□□□ -1.11
ATRX-208ENST00000622960 SCGB3A1Q96QR1 104 aa8.11□□□□□ -1.11
ATRX-208ENST00000622960 NDUFC2-KCTD14E9PQ53 114 aa8.1□□□□□ -1.11
ATRX-208ENST00000622960 MT1HL1P0DM35 61 aa8.1□□□□□ -1.11
ATRX-208ENST00000622960 UBE2BP63146 152 aa8.1□□□□□ -1.11
ATRX-208ENST00000622960 LINC00173Q6ZV60 143 aa8.1□□□□□ -1.11
ATRX-208ENST00000622960 FA2HQ7L5A8 372 aa8.1□□□□□ -1.11
ATRX-208ENST00000622960 PHF5AQ7RTV0 110 aaKnown RBP8.1□□□□□ -1.11
ATRX-208ENST00000622960 ERASQ7Z444 233 aa8.1□□□□□ -1.11
ATRX-208ENST00000622960 Q8IZM0 81 aa8.1□□□□□ -1.11
ATRX-208ENST00000622960 ALKBH7Q9BT30 221 aaPredicted RBP8.1□□□□□ -1.11
ATRX-208ENST00000622960 KIAA0087Q14695 138 aa8.09□□□□□ -1.11
ATRX-208ENST00000622960 ZC2HC1BQ5TFG8 222 aa8.09□□□□□ -1.11
ATRX-208ENST00000622960 C2orf82Q6UX34 121 aa8.09□□□□□ -1.11
ATRX-208ENST00000622960 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
ATRX-208ENST00000622960 PSORS1C2Q9UIG4 136 aa8.09□□□□□ -1.11
ATRX-208ENST00000622960 M0QXV9 152 aa8.08□□□□□ -1.12
ATRX-208ENST00000622960 CXCL5P42830 114 aa8.08□□□□□ -1.12
ATRX-208ENST00000622960 LINC00469Q8N7U9 141 aa8.08□□□□□ -1.12
ATRX-208ENST00000622960 CDKN2A-AS1Q9UH64 79 aa8.07□□□□□ -1.12
ATRX-208ENST00000622960 PKHD1L1Q86WI1 4243 aa8.07□□□□□ -1.12
ATRX-208ENST00000622960 FAM168BA1KXE4 195 aa8.06□□□□□ -1.12
ATRX-208ENST00000622960 F8VRH5 84 aa8.06□□□□□ -1.12
ATRX-208ENST00000622960 FABP4P15090 132 aa8.06□□□□□ -1.12
ATRX-208ENST00000622960 LINC00518Q8N0U6 118 aa8.06□□□□□ -1.12
ATRX-208ENST00000622960 DIRC1Q969H9 104 aa8.06□□□□□ -1.12
ATRX-208ENST00000622960 TINCRA0A1B0GVN0 87 aa8.05□□□□□ -1.12
ATRX-208ENST00000622960 SMIM6P0DI80 62 aa8.05□□□□□ -1.12
ATRX-208ENST00000622960 SRSF9Q13242 221 aaKnown RBP eCLIP8.05□□□□□ -1.12
ATRX-208ENST00000622960 HIST1H2BLQ99880 126 aa8.05□□□□□ -1.12
ATRX-208ENST00000622960 LRP1Q07954 4544 aaKnown RBP8.04□□□□□ -1.12
ATRX-208ENST00000622960 H3BRM9 83 aa8.04□□□□□ -1.12
ATRX-208ENST00000622960 IGLV7-43P04211 117 aa8.04□□□□□ -1.12
ATRX-208ENST00000622960 PDZD11Q5EBL8 140 aa8.04□□□□□ -1.12
ATRX-208ENST00000622960 C18orf32Q8TCD1 76 aa8.04□□□□□ -1.12
ATRX-208ENST00000622960 SERF1AO75920 110 aa8.03□□□□□ -1.12
ATRX-208ENST00000622960 PMVKQ15126 192 aa8.03□□□□□ -1.12
ATRX-208ENST00000622960 CHCHD1Q96BP2 118 aaKnown RBP8.03□□□□□ -1.12
ATRX-208ENST00000622960 LINC01546A6NGU7 62 aa8.02□□□□□ -1.13
ATRX-208ENST00000622960 HSBP1O75506 76 aa8.02□□□□□ -1.13
ATRX-208ENST00000622960 LBHQ53QV2 105 aaPredicted RBP8.02□□□□□ -1.13
ATRX-208ENST00000622960 COX7B2Q8TF08 81 aa8.02□□□□□ -1.13
ATRX-208ENST00000622960 C12orf57Q99622 126 aa8.02□□□□□ -1.13
ATRX-208ENST00000622960 SMIM1B2RUZ4 78 aa8.01□□□□□ -1.13
ATRX-208ENST00000622960 LINC00614P0C842 121 aa8.01□□□□□ -1.13
ATRX-208ENST00000622960 C9orf129Q5T035 196 aaKnown RBP8.01□□□□□ -1.13
ATRX-208ENST00000622960 CST9LQ9H4G1 147 aa8.01□□□□□ -1.13
ATRX-208ENST00000622960 FAT3Q8TDW7 4589 aa8.01□□□□□ -1.13
ATRX-208ENST00000622960 NUPR1O60356 82 aa8□□□□□ -1.13
ATRX-208ENST00000622960 JOSD1Q15040 202 aaPredicted RBP8□□□□□ -1.13
ATRX-208ENST00000622960 XAGE1AQ9HD64 81 aa8□□□□□ -1.13
ATRX-208ENST00000622960 IGLV5-45A0A087WSX0 123 aa7.99□□□□□ -1.13
ATRX-208ENST00000622960 H0Y9J4 135 aa7.99□□□□□ -1.13
ATRX-208ENST00000622960 ATP5LO75964 103 aa7.99□□□□□ -1.13
ATRX-208ENST00000622960 SPINK8P0C7L1 97 aa7.99□□□□□ -1.13
ATRX-208ENST00000622960 HBDP02042 147 aa7.98□□□□□ -1.13
ATRX-208ENST00000622960 S100A12P80511 92 aa7.98□□□□□ -1.13
ATRX-208ENST00000622960 SCGB1D1O95968 90 aa7.97□□□□□ -1.13
ATRX-208ENST00000622960 KRTAP10-8P60410 259 aa7.97□□□□□ -1.13
ATRX-208ENST00000622960 C22orf24Q9Y442 160 aa7.97□□□□□ -1.13
ATRX-208ENST00000622960 LINC00310P59036 64 aa7.96□□□□□ -1.14
ATRX-208ENST00000622960 MRPL55Q7Z7F7 128 aaKnown RBP7.96□□□□□ -1.14
ATRX-208ENST00000622960 NKAPP1Q8N9T2 125 aa7.96□□□□□ -1.14
ATRX-208ENST00000622960 TP73-AS1Q9UF72 201 aa7.96□□□□□ -1.14
ATRX-208ENST00000622960 IGLC3P0DOY3 106 aa7.95□□□□□ -1.14
ATRX-208ENST00000622960 ODF1Q14990 250 aa7.95□□□□□ -1.14
ATRX-208ENST00000622960 PYY3Q5JQD4 70 aa7.95□□□□□ -1.14
ATRX-208ENST00000622960 HSPB8Q9UJY1 196 aa7.95□□□□□ -1.14
ATRX-208ENST00000622960 IGLV1-50A0A075B6I6 118 aa7.94□□□□□ -1.14
ATRX-208ENST00000622960 LEPROTL1O95214 131 aa7.94□□□□□ -1.14
ATRX-208ENST00000622960 RPL13AP40429 203 aaKnown RBP7.94□□□□□ -1.14
ATRX-208ENST00000622960 SFTA2Q6UW10 78 aa7.94□□□□□ -1.14
ATRX-208ENST00000622960 KRTAP11-1Q8IUC1 163 aa7.94□□□□□ -1.14
ATRX-208ENST00000622960 KRTAP7-1Q8IUC3 87 aa7.94□□□□□ -1.14
ATRX-208ENST00000622960 FAM19A2Q8N3H0 131 aa7.94□□□□□ -1.14
ATRX-208ENST00000622960 UBR4Q5T4S7 5183 aa7.93□□□□□ -1.14
ATRX-208ENST00000622960 RPL28P46779 137 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms