RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 HERVK_113P63121 156 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 UBE2WQ96B02 151 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 PRR34Q9NV39 138 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 PRO1854Q9UHT4 67 aa12.56□□□□□ -0.4
SEMA6C-210ENST00000621728 TRBV20-1A0A075B6N2 111 aa12.55□□□□□ -0.4
SEMA6C-210ENST00000621728 MUC7Q8TAX7 377 aa12.55□□□□□ -0.4
SEMA6C-210ENST00000621728 SPANXDQ9BXN6 97 aa12.55□□□□□ -0.4
SEMA6C-210ENST00000621728 SPANXCQ9NY87 97 aa12.55□□□□□ -0.4
SEMA6C-210ENST00000621728 APOMO95445 188 aa12.54□□□□□ -0.4
SEMA6C-210ENST00000621728 SS18Q15532 418 aa12.54□□□□□ -0.4
SEMA6C-210ENST00000621728 UBE2DNLQ8IWF7 75 aa12.54□□□□□ -0.4
SEMA6C-210ENST00000621728 UPK3BQ9BT76 320 aa12.54□□□□□ -0.4
SEMA6C-210ENST00000621728 NDUFA12Q9UI09 145 aa12.54□□□□□ -0.4
SEMA6C-210ENST00000621728 C5orf38Q86SI9 138 aa12.53□□□□□ -0.4
SEMA6C-210ENST00000621728 CHCHD10Q8WYQ3 142 aaPredicted RBP12.53□□□□□ -0.4
SEMA6C-210ENST00000621728 H3BMG7 143 aa12.52□□□□□ -0.4
SEMA6C-210ENST00000621728 IGHV3OR16-9A0A0B4J2B5 98 aa12.52□□□□□ -0.41
SEMA6C-210ENST00000621728 J3QR89 54 aa12.52□□□□□ -0.41
SEMA6C-210ENST00000621728 CRPP02741 224 aa12.52□□□□□ -0.41
SEMA6C-210ENST00000621728 Q9H8V8 135 aa12.52□□□□□ -0.41
SEMA6C-210ENST00000621728 A4D1N5 150 aa12.51□□□□□ -0.41
SEMA6C-210ENST00000621728 WWC2-AS2Q96NR7 200 aa12.51□□□□□ -0.41
SEMA6C-210ENST00000621728 PRO0461Q9UI25 63 aa12.51□□□□□ -0.41
SEMA6C-210ENST00000621728 SMIM1B2RUZ4 78 aa12.5□□□□□ -0.41
SEMA6C-210ENST00000621728 IFITM1P13164 125 aa12.5□□□□□ -0.41
SEMA6C-210ENST00000621728 MUSTN1Q8IVN3 82 aa12.5□□□□□ -0.41
SEMA6C-210ENST00000621728 LITAFQ99732 161 aa12.5□□□□□ -0.41
SEMA6C-210ENST00000621728 VPS13DQ5THJ4 4388 aa12.5□□□□□ -0.41
SEMA6C-210ENST00000621728 IGLV5-39A0A0G2JS06 123 aa12.49□□□□□ -0.41
SEMA6C-210ENST00000621728 NDUFA1O15239 70 aa12.49□□□□□ -0.41
SEMA6C-210ENST00000621728 LOC107984156A0A0G2JMH3 177 aa12.49□□□□□ -0.41
SEMA6C-210ENST00000621728 GAGE12HA6NDE8 117 aa12.49□□□□□ -0.41
SEMA6C-210ENST00000621728 MIAQ16674 131 aa12.49□□□□□ -0.41
SEMA6C-210ENST00000621728 ARL17AQ8IVW1 177 aa12.49□□□□□ -0.41
SEMA6C-210ENST00000621728 Q9HAA7 133 aa12.49□□□□□ -0.41
SEMA6C-210ENST00000621728 FOXI1Q12951 378 aa12.48□□□□□ -0.41
SEMA6C-210ENST00000621728 MTURNQ8N3F0 131 aa12.48□□□□□ -0.41
SEMA6C-210ENST00000621728 KRTAP1-5Q9BYS1 174 aa12.48□□□□□ -0.41
SEMA6C-210ENST00000621728 ERG28Q9UKR5 140 aa12.48□□□□□ -0.41
SEMA6C-210ENST00000621728 CIRBPQ14011 172 aaKnown RBP12.47□□□□□ -0.41
SEMA6C-210ENST00000621728 WFDC2Q14508 124 aa12.47□□□□□ -0.41
SEMA6C-210ENST00000621728 CD164L2Q6UWJ8 174 aa12.47□□□□□ -0.41
SEMA6C-210ENST00000621728 COPS9Q8WXC6 57 aa12.47□□□□□ -0.41
SEMA6C-210ENST00000621728 A0A087WZ39 114 aa12.47□□□□□ -0.41
SEMA6C-210ENST00000621728 KRTAP26-1Q6PEX3 210 aa12.45□□□□□ -0.42
SEMA6C-210ENST00000621728 PPDPFQ9H3Y8 114 aa12.45□□□□□ -0.42
SEMA6C-210ENST00000621728 IBA57-AS1B1ANH7 110 aa12.45□□□□□ -0.42
SEMA6C-210ENST00000621728 PSMB2P49721 201 aa12.45□□□□□ -0.42
SEMA6C-210ENST00000621728 M0QXV9 152 aa12.44□□□□□ -0.42
SEMA6C-210ENST00000621728 IGKV2D-24A0A075B6R9 120 aa12.43□□□□□ -0.42
SEMA6C-210ENST00000621728 TRAV8-4A0A0B4J246 113 aa12.43□□□□□ -0.42
SEMA6C-210ENST00000621728 COX7A2LO14548 114 aa12.43□□□□□ -0.42
SEMA6C-210ENST00000621728 SCGB1C2P0DMR2 95 aa12.43□□□□□ -0.42
SEMA6C-210ENST00000621728 HERV-K104P63124 156 aa12.43□□□□□ -0.42
SEMA6C-210ENST00000621728 SIGMAR1Q99720 223 aa12.43□□□□□ -0.42
SEMA6C-210ENST00000621728 TOMM7Q9P0U1 55 aa12.43□□□□□ -0.42
SEMA6C-210ENST00000621728 TRBV30A0A0K0K1B3 111 aa12.42□□□□□ -0.42
SEMA6C-210ENST00000621728 PRSS2P07478 247 aa12.42□□□□□ -0.42
SEMA6C-210ENST00000621728 CASC10Q5T4H9 136 aa12.42□□□□□ -0.42
SEMA6C-210ENST00000621728 C1orf43Q9BWL3 253 aa12.41□□□□□ -0.42
SEMA6C-210ENST00000621728 TCL1BO95988 128 aa12.41□□□□□ -0.42
SEMA6C-210ENST00000621728 ETDBQ3ZM63 59 aa12.41□□□□□ -0.42
SEMA6C-210ENST00000621728 ADAMTSL4-AS1Q5T5F5 129 aa12.41□□□□□ -0.42
SEMA6C-210ENST00000621728 DNAH10Q8IVF4 4471 aa12.4□□□□□ -0.42
SEMA6C-210ENST00000621728 EIF4EBP3O60516 100 aaPredicted RBP12.4□□□□□ -0.42
SEMA6C-210ENST00000621728 MALP21145 153 aa12.39□□□□□ -0.43
SEMA6C-210ENST00000621728 COX7B2Q8TF08 81 aa12.39□□□□□ -0.43
SEMA6C-210ENST00000621728 LINC00526Q96FQ7 95 aa12.37□□□□□ -0.43
SEMA6C-210ENST00000621728 LINC01600Q96MT4 127 aa12.37□□□□□ -0.43
SEMA6C-210ENST00000621728 ATXN8Q156A1 80 aa12.37□□□□□ -0.43
SEMA6C-210ENST00000621728 Q1RN00 199 aa12.37□□□□□ -0.43
SEMA6C-210ENST00000621728 ZNF625Q96I27 306 aaPredicted RBP12.37□□□□□ -0.43
SEMA6C-210ENST00000621728 COX6CP09669 75 aa12.36□□□□□ -0.43
SEMA6C-210ENST00000621728 SMCPP49901 116 aaPredicted RBP12.36□□□□□ -0.43
SEMA6C-210ENST00000621728 LINC01561Q8N1V8 128 aa12.36□□□□□ -0.43
SEMA6C-210ENST00000621728 NBDYA0A0U1RRE5 68 aa12.35□□□□□ -0.43
SEMA6C-210ENST00000621728 M0R2N4 97 aa12.35□□□□□ -0.43
SEMA6C-210ENST00000621728 TEN1Q86WV5 123 aa12.35□□□□□ -0.43
SEMA6C-210ENST00000621728 KIAA0087Q14695 138 aa12.35□□□□□ -0.43
SEMA6C-210ENST00000621728 SFTA2Q6UW10 78 aa12.35□□□□□ -0.43
SEMA6C-210ENST00000621728 C2orf82Q6UX34 121 aa12.34□□□□□ -0.43
SEMA6C-210ENST00000621728 C6orf223Q8N319 242 aa12.34□□□□□ -0.43
SEMA6C-210ENST00000621728 KMT2AQ03164 3969 aa12.34□□□□□ -0.43
SEMA6C-210ENST00000621728 C3orf84H3BNL1 204 aa12.33□□□□□ -0.44
SEMA6C-210ENST00000621728 LINC00308Q8TCZ7 52 aa12.33□□□□□ -0.44
SEMA6C-210ENST00000621728 PPDPFLQ8WWR9 84 aa12.33□□□□□ -0.44
SEMA6C-210ENST00000621728 ALMS1Q8TCU4 4167 aa12.33□□□□□ -0.44
SEMA6C-210ENST00000621728 LY6G6CO95867 125 aa12.33□□□□□ -0.44
SEMA6C-210ENST00000621728 CKS1BP61024 79 aa12.33□□□□□ -0.44
SEMA6C-210ENST00000621728 HIGD2BQ4VC39 106 aa12.33□□□□□ -0.44
SEMA6C-210ENST00000621728 C6orf226Q5I0X4 101 aa12.33□□□□□ -0.44
SEMA6C-210ENST00000621728 C15orf56Q8N910 161 aa12.33□□□□□ -0.44
SEMA6C-210ENST00000621728 SPAG11BQ08648 103 aa12.32□□□□□ -0.44
SEMA6C-210ENST00000621728 Q8IZM0 81 aa12.32□□□□□ -0.44
SEMA6C-210ENST00000621728 H7C2G1 150 aa12.31□□□□□ -0.44
SEMA6C-210ENST00000621728 TRIAP1O43715 76 aa12.3□□□□□ -0.44
SEMA6C-210ENST00000621728 SLC25A20O43772 301 aa12.3□□□□□ -0.44
SEMA6C-210ENST00000621728 RMI2Q96E14 147 aa12.3□□□□□ -0.44
SEMA6C-210ENST00000621728 A0A0U1RRA0 63 aa12.29□□□□□ -0.44
SEMA6C-210ENST00000621728 LECT2O14960 151 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms